RNA–Protein interactions for RNA: ENST00000366782.5

PSEN2-201, Transcript of presenilin 2, humanhuman

TSL 1 (best) BASIC

Gene PSEN2, Length 2,465 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN2-201ENST00000366782 PABPC4Q13310 644 aaKnown RBP eCLIP15.9■□□□□ 0.14
PSEN2-201ENST00000366782 SLFN13Q68D06 897 aa15.9■□□□□ 0.14
PSEN2-201ENST00000366782 HHIPL2Q6UWX4 724 aa15.9■□□□□ 0.14
PSEN2-201ENST00000366782 SH3BP5LQ7L8J4 393 aa15.9■□□□□ 0.14
PSEN2-201ENST00000366782 NUCKS1Q9H1E3 243 aaKnown RBP15.9■□□□□ 0.14
PSEN2-201ENST00000366782 FAM86B1E9PN63 330 aa15.89■□□□□ 0.13
PSEN2-201ENST00000366782 FAM86B2P0C5J1 330 aa15.89■□□□□ 0.13
PSEN2-201ENST00000366782 NR2F2P24468 414 aa15.89■□□□□ 0.13
PSEN2-201ENST00000366782 PAFAH1B1P43034 410 aa15.89■□□□□ 0.13
PSEN2-201ENST00000366782 ARHGAP4P98171 946 aa15.89■□□□□ 0.13
PSEN2-201ENST00000366782 TEKT1Q969V4 418 aa15.89■□□□□ 0.13
PSEN2-201ENST00000366782 MKL1Q969V6 931 aa15.89■□□□□ 0.13
PSEN2-201ENST00000366782 KRT18P05783 430 aaKnown RBP15.89■□□□□ 0.13
PSEN2-201ENST00000366782 POLD1P28340 1107 aa15.89■□□□□ 0.13
PSEN2-201ENST00000366782 CRKP46108 304 aa15.89■□□□□ 0.13
PSEN2-201ENST00000366782 RNASE9P60153 205 aaKnown RBP15.89■□□□□ 0.13
PSEN2-201ENST00000366782 KLHL30Q0D2K2 578 aa15.89■□□□□ 0.13
PSEN2-201ENST00000366782 TRADDQ15628 312 aa15.89■□□□□ 0.13
PSEN2-201ENST00000366782 KIAA0753Q2KHM9 967 aa15.89■□□□□ 0.13
PSEN2-201ENST00000366782 MEI1Q5TIA1 1274 aa15.89■□□□□ 0.13
PSEN2-201ENST00000366782 C8orf74Q6P047 294 aa15.89■□□□□ 0.13
PSEN2-201ENST00000366782 IRF2BP2Q7Z5L9 587 aa15.89■□□□□ 0.13
PSEN2-201ENST00000366782 CYP2W1Q8TAV3 490 aa15.89■□□□□ 0.13
PSEN2-201ENST00000366782 SH3GL2Q99962 352 aa15.89■□□□□ 0.13
PSEN2-201ENST00000366782 REEP2Q9BRK0 252 aa15.89■□□□□ 0.13
PSEN2-201ENST00000366782 EHD4Q9H223 541 aa15.89■□□□□ 0.13
PSEN2-201ENST00000366782 PCDHGC5Q9Y5F6 944 aa15.89■□□□□ 0.13
PSEN2-201ENST00000366782 SMCHD1A6NHR9 2005 aa15.88■□□□□ 0.13
PSEN2-201ENST00000366782 ESYT3A0FGR9 886 aa15.88■□□□□ 0.13
PSEN2-201ENST00000366782 GRID2IPA4D2P6 1211 aa15.88■□□□□ 0.13
PSEN2-201ENST00000366782 RSPH10B2B2RC85 870 aa15.88■□□□□ 0.13
PSEN2-201ENST00000366782 FAM153BP0C7A2 387 aa15.88■□□□□ 0.13
PSEN2-201ENST00000366782 RSPH10BP0C881 870 aa15.88■□□□□ 0.13
PSEN2-201ENST00000366782 MYBP10242 640 aa15.88■□□□□ 0.13
PSEN2-201ENST00000366782 GTF2A1P52655 376 aaPredicted RBP15.88■□□□□ 0.13
PSEN2-201ENST00000366782 CORO7P57737 925 aa15.88■□□□□ 0.13
PSEN2-201ENST00000366782 PTK2Q05397 1052 aa15.88■□□□□ 0.13
PSEN2-201ENST00000366782 EDRF1Q3B7T1 1238 aa15.88■□□□□ 0.13
PSEN2-201ENST00000366782 FAM153CQ494X1 144 aa15.88■□□□□ 0.13
PSEN2-201ENST00000366782 TTC31Q49AM3 519 aaPredicted RBP15.88■□□□□ 0.13
PSEN2-201ENST00000366782 CFAP221Q4G0U5 840 aa15.88■□□□□ 0.13
PSEN2-201ENST00000366782 SFR1Q86XK3 245 aa15.88■□□□□ 0.13
PSEN2-201ENST00000366782 SEPT12Q8IYM1 358 aa15.88■□□□□ 0.13
PSEN2-201ENST00000366782 FAM153AQ9UHL3 310 aa15.88■□□□□ 0.13
PSEN2-201ENST00000366782 HDAC9Q9UKV0 1011 aa15.88■□□□□ 0.13
PSEN2-201ENST00000366782 PITPNM2Q9BZ72 1349 aa15.88■□□□□ 0.13
PSEN2-201ENST00000366782 CARSP49589 748 aaKnown RBP15.88■□□□□ 0.13
PSEN2-201ENST00000366782 SLC30A10Q6XR72 485 aa15.88■□□□□ 0.13
PSEN2-201ENST00000366782 EPM2AIP1Q7L775 607 aaPredicted RBP15.88■□□□□ 0.13
PSEN2-201ENST00000366782 ZNF571Q7Z3V5 609 aaPredicted RBP15.88■□□□□ 0.13
PSEN2-201ENST00000366782 GOLGA6L1Q8N7Z2 621 aa15.88■□□□□ 0.13
PSEN2-201ENST00000366782 RUBCNQ92622 972 aa15.88■□□□□ 0.13
PSEN2-201ENST00000366782 ARL8AQ96BM9 186 aa15.88■□□□□ 0.13
PSEN2-201ENST00000366782 CCDC17Q96LX7 622 aa15.88■□□□□ 0.13
PSEN2-201ENST00000366782 NAP1L4Q99733 375 aaKnown RBP15.88■□□□□ 0.13
PSEN2-201ENST00000366782 GOLPH3Q9H4A6 298 aa15.88■□□□□ 0.13
PSEN2-201ENST00000366782 YY1AP1Q9H869 796 aa15.88■□□□□ 0.13
PSEN2-201ENST00000366782 DBNDD1Q9H9R9 158 aa15.88■□□□□ 0.13
PSEN2-201ENST00000366782 FAM198AQ9UFP1 575 aa15.88■□□□□ 0.13
PSEN2-201ENST00000366782 AJAP1Q9UKB5 411 aaPredicted RBP15.88■□□□□ 0.13
PSEN2-201ENST00000366782 NRXN2Q9P2S2 1712 aa15.87■□□□□ 0.13
PSEN2-201ENST00000366782 GOLGA6CA6NDK9 693 aa15.87■□□□□ 0.13
PSEN2-201ENST00000366782 CETN3O15182 167 aa15.87■□□□□ 0.13
PSEN2-201ENST00000366782 GOLGA6DP0CG33 693 aa15.87■□□□□ 0.13
PSEN2-201ENST00000366782 EPHB4P54760 987 aa15.87■□□□□ 0.13
PSEN2-201ENST00000366782 JAG1P78504 1218 aa15.87■□□□□ 0.13
PSEN2-201ENST00000366782 KCNA1Q09470 495 aa15.87■□□□□ 0.13
PSEN2-201ENST00000366782 ASIC2Q16515 512 aa15.87■□□□□ 0.13
PSEN2-201ENST00000366782 USH1GQ495M9 461 aa15.87■□□□□ 0.13
PSEN2-201ENST00000366782 CERKLQ49MI3 558 aaPredicted RBP15.87■□□□□ 0.13
PSEN2-201ENST00000366782 SLFN12Q8IYM2 578 aa15.87■□□□□ 0.13
PSEN2-201ENST00000366782 SYT2Q8N9I0 419 aaPredicted RBP15.87■□□□□ 0.13
PSEN2-201ENST00000366782 RBM46Q8TBY0 533 aaKnown RBP15.87■□□□□ 0.13
PSEN2-201ENST00000366782 INPP4AQ96PE3 977 aaPredicted RBP15.87■□□□□ 0.13
PSEN2-201ENST00000366782 IKZF4Q9H2S9 585 aa15.87■□□□□ 0.13
PSEN2-201ENST00000366782 GDF3Q9NR23 364 aa15.87■□□□□ 0.13
PSEN2-201ENST00000366782 GOLGA6AQ9NYA3 693 aa15.87■□□□□ 0.13
PSEN2-201ENST00000366782 TRAF3IP3Q9Y228 551 aa15.87■□□□□ 0.13
PSEN2-201ENST00000366782 OPLAHO14841 1288 aa15.87■□□□□ 0.13
PSEN2-201ENST00000366782 AKAP3O75969 853 aa15.87■□□□□ 0.13
PSEN2-201ENST00000366782 TNFRSF8P28908 595 aa15.87■□□□□ 0.13
PSEN2-201ENST00000366782 KNOP1Q1ED39 458 aaKnown RBP15.87■□□□□ 0.13
PSEN2-201ENST00000366782 TTMPQ5BVD1 217 aa15.87■□□□□ 0.13
PSEN2-201ENST00000366782 KIAA0825Q8IV33 1275 aa15.87■□□□□ 0.13
PSEN2-201ENST00000366782 FAM76AQ8TAV0 307 aa15.87■□□□□ 0.13
PSEN2-201ENST00000366782 DCAF4Q8WV16 495 aa15.87■□□□□ 0.13
PSEN2-201ENST00000366782 NYAP2Q9P242 653 aa15.87■□□□□ 0.13
PSEN2-201ENST00000366782 SHOX2O60902 331 aaPredicted RBP15.86■□□□□ 0.13
PSEN2-201ENST00000366782 GDF11O95390 407 aa15.86■□□□□ 0.13
PSEN2-201ENST00000366782 UCHL3P15374 230 aa15.86■□□□□ 0.13
PSEN2-201ENST00000366782 PON1P27169 355 aa15.86■□□□□ 0.13
PSEN2-201ENST00000366782 RPA1P27694 616 aa15.86■□□□□ 0.13
PSEN2-201ENST00000366782 CASP4P49662 377 aa15.86■□□□□ 0.13
PSEN2-201ENST00000366782 CYP4A11Q02928 519 aa15.86■□□□□ 0.13
PSEN2-201ENST00000366782 KCTD19Q17RG1 926 aaPredicted RBP15.86■□□□□ 0.13
PSEN2-201ENST00000366782 SKIDA1Q1XH10 827 aa15.86■□□□□ 0.13
PSEN2-201ENST00000366782 Q4G0T1 1027 aa15.86■□□□□ 0.13
PSEN2-201ENST00000366782 PPP4R3CPQ6ZMV5 832 aa15.86■□□□□ 0.13
PSEN2-201ENST00000366782 CAVIN3Q969G5 261 aa15.86■□□□□ 0.13
PSEN2-201ENST00000366782 TSKSQ9UJT2 592 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms