RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 PPP1R37O75864 691 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 FAM8A1Q9UBU6 413 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 KIF11P52732 1056 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 ART3Q13508 389 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 MTF1Q14872 753 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 NYAP1Q6ZVC0 841 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 ING2Q9H160 280 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 CARMIL3Q8ND23 1372 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 H0YC42 278 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 STK25O00506 426 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 ARID1AO14497 2285 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 FAM95CA0A1B0GW59 222 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 ATP6V1G2O95670 118 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 CCDC85BQ15834 202 aaPredicted RBP11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 CALCRLQ16602 461 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 DYMQ7RTS9 669 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 RAB44Q7Z6P3 723 aaPredicted RBP11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 CNBD2Q96M20 576 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 RPN1P04843 607 aaKnown RBP11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 NQO1P15559 274 aaKnown RBP11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 TARSP26639 723 aaKnown RBP11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 PGM1P36871 562 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 AP1B1Q10567 949 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 STAG2Q8N3U4 1231 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 GLG1Q92896 1179 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 FUT8Q9BYC5 575 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 BTBD7Q9P203 1132 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 GPC4O75487 556 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 NDUFA10O95299 355 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 ECEL1O95672 775 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 H2AFXP16104 143 aaPredicted RBP11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 ICA1Q05084 483 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 TPH2Q8IWU9 490 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 CCDC87Q9NVE4 849 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 ALDH18A1P54886 795 aaKnown RBP11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 PREPLQ4J6C6 727 aaPredicted RBP11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 NSMFQ6X4W1 530 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 SAMSN1Q9NSI8 373 aaKnown RBP11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 DDX18Q9NVP1 670 aaKnown RBP11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 H7C0C1 242 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 RNF113AO15541 343 aaKnown RBP11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 NBNO60934 754 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 ATP5OP48047 213 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 BTNL9Q6UXG8 535 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 NOA1Q8NC60 698 aaKnown RBP11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 PRCCQ92733 491 aaPredicted RBP11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 FGGP02679 453 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 POLR3CQ9BUI4 534 aaPredicted RBP11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 CDH24Q86UP0 819 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 ATP11CQ8NB49 1132 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 RAB20Q9NX57 234 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 SASH3O75995 380 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 SLC39A6Q13433 755 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 DAB2IPQ5VWQ8 1189 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 HAUS3Q68CZ6 603 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 TLK1Q9UKI8 766 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 DNM3Q9UQ16 869 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 RARS2Q5T160 578 aaKnown RBP11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 ARHGEF18Q6ZSZ5 1173 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 ALG13Q9NP73 1137 aaKnown RBP11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 SUGT1Q9Y2Z0 365 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 NBPF26B4DH59 902 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 TSC22D2O75157 780 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 CMA1P23946 247 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 ST13P50502 369 aaKnown RBP11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 NBPF15Q8N660 670 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 MAN1B1Q9UKM7 699 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 RBM6P78332 1123 aaKnown RBP11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 P3H1Q32P28 736 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 EAPPQ56P03 285 aaPredicted RBP11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 HABP4Q5JVS0 413 aaKnown RBP11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 ADCK1Q86TW2 530 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 ARL8AQ96BM9 186 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 SNAPC4Q5SXM2 1469 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 FGFR4P22455 802 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 TLK2Q86UE8 772 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 LZICQ8WZA0 190 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 CCPG1Q9ULG6 757 aa11.86□□□□□ -0.51
CDC42BPA-205ENST00000366769 PALMO75781 387 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 GALNT4Q8N4A0 578 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 LMCD1Q9NZU5 365 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 ADCY9O60503 1353 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 P4HA2O15460 535 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 ZC3H12BQ5HYM0 836 aaKnown RBP11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 DDX17Q92841 729 aaKnown RBP11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 NYXQ9GZU5 481 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 KIF1BO60333 1816 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 PRAG1Q86YV5 1406 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 EPM2AIP1Q7L775 607 aaPredicted RBP11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 APOL6Q9BWW8 343 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 FAM107AO95990 144 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 USP4Q13107 963 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 DZIP3Q86Y13 1208 aaKnown RBP11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 DACH2Q96NX9 599 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 C19orf44Q9H6X5 657 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 PRPSAP1Q14558 356 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 FAM102BQ5T8I3 360 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 SPATA1Q5VX52 437 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms