RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 IL31RAQ8NI17 732 aa9.97□□□□□ -0.81
HMGB1P39-201ENST00000366304 NSUN6Q8TEA1 469 aaKnown RBP9.97□□□□□ -0.81
HMGB1P39-201ENST00000366304 ATP8B4Q8TF62 1192 aa9.97□□□□□ -0.81
HMGB1P39-201ENST00000366304 RMDN3Q96TC7 470 aa9.97□□□□□ -0.81
HMGB1P39-201ENST00000366304 IRF2BPLQ9H1B7 796 aa9.97□□□□□ -0.81
HMGB1P39-201ENST00000366304 S1PR5Q9H228 398 aa9.97□□□□□ -0.81
HMGB1P39-201ENST00000366304 CACNA1GO43497 2377 aa9.96□□□□□ -0.81
HMGB1P39-201ENST00000366304 CEP250Q9BV73 2442 aa9.96□□□□□ -0.81
HMGB1P39-201ENST00000366304 ACACBO00763 2458 aa9.96□□□□□ -0.81
HMGB1P39-201ENST00000366304 PPFIA4O75335 1185 aa9.96□□□□□ -0.82
HMGB1P39-201ENST00000366304 DGKIO75912 1065 aa9.96□□□□□ -0.82
HMGB1P39-201ENST00000366304 BRD1O95696 1058 aa9.96□□□□□ -0.82
HMGB1P39-201ENST00000366304 NR3C2P08235 984 aa9.96□□□□□ -0.82
HMGB1P39-201ENST00000366304 FGRP09769 529 aa9.96□□□□□ -0.82
HMGB1P39-201ENST00000366304 GATMP50440 423 aa9.96□□□□□ -0.82
HMGB1P39-201ENST00000366304 ADAM17P78536 824 aa9.96□□□□□ -0.82
HMGB1P39-201ENST00000366304 BTG3Q14201 252 aaPredicted RBP9.96□□□□□ -0.82
HMGB1P39-201ENST00000366304 LPIN1Q14693 890 aa9.96□□□□□ -0.82
HMGB1P39-201ENST00000366304 STXBP2Q15833 593 aa9.96□□□□□ -0.82
HMGB1P39-201ENST00000366304 CELF3Q5SZQ8 465 aaKnown RBP9.96□□□□□ -0.82
HMGB1P39-201ENST00000366304 RUFY4Q6ZNE9 571 aa9.96□□□□□ -0.82
HMGB1P39-201ENST00000366304 RTN4RL1Q86UN2 441 aaPredicted RBP9.96□□□□□ -0.82
HMGB1P39-201ENST00000366304 SPATA33Q96N06 139 aa9.96□□□□□ -0.82
HMGB1P39-201ENST00000366304 MPHOSPH6Q99547 160 aaKnown RBP9.96□□□□□ -0.82
HMGB1P39-201ENST00000366304 UBA5Q9GZZ9 404 aa9.96□□□□□ -0.82
HMGB1P39-201ENST00000366304 NAPBQ9H115 298 aa9.96□□□□□ -0.82
HMGB1P39-201ENST00000366304 EHMT1Q9H9B1 1298 aa9.96□□□□□ -0.82
HMGB1P39-201ENST00000366304 ECHDC1Q9NTX5 307 aa9.96□□□□□ -0.82
HMGB1P39-201ENST00000366304 ZBTB40Q9NUA8 1239 aa9.96□□□□□ -0.82
HMGB1P39-201ENST00000366304 SETD4Q9NVD3 440 aa9.96□□□□□ -0.82
HMGB1P39-201ENST00000366304 VPS9D1Q9Y2B5 631 aa9.96□□□□□ -0.82
HMGB1P39-201ENST00000366304 MRVI1Q9Y6F6 885 aa9.96□□□□□ -0.82
HMGB1P39-201ENST00000366304 TPRP12270 2363 aaKnown RBP9.96□□□□□ -0.82
HMGB1P39-201ENST00000366304 ORC4O43929 436 aa9.95□□□□□ -0.82
HMGB1P39-201ENST00000366304 EIF3JO75822 258 aaKnown RBP9.95□□□□□ -0.82
HMGB1P39-201ENST00000366304 GGPS1O95749 300 aa9.95□□□□□ -0.82
HMGB1P39-201ENST00000366304 GHRP10912 638 aa9.95□□□□□ -0.82
HMGB1P39-201ENST00000366304 TOP1P11387 765 aaKnown RBP9.95□□□□□ -0.82
HMGB1P39-201ENST00000366304 ATF7P17544 494 aaPredicted RBP9.95□□□□□ -0.82
HMGB1P39-201ENST00000366304 UBA1P22314 1058 aaKnown RBP9.95□□□□□ -0.82
HMGB1P39-201ENST00000366304 KCNC3Q14003 757 aa9.95□□□□□ -0.82
HMGB1P39-201ENST00000366304 TRIM50Q86XT4 487 aa9.95□□□□□ -0.82
HMGB1P39-201ENST00000366304 KREMEN2Q8NCW0 462 aa9.95□□□□□ -0.82
HMGB1P39-201ENST00000366304 POF1BQ8WVV4 589 aa9.95□□□□□ -0.82
HMGB1P39-201ENST00000366304 NKD2Q969F2 451 aaPredicted RBP9.95□□□□□ -0.82
HMGB1P39-201ENST00000366304 CNTNAP3BQ96NU0 1288 aa9.95□□□□□ -0.82
HMGB1P39-201ENST00000366304 IWS1Q96ST2 819 aa9.95□□□□□ -0.82
HMGB1P39-201ENST00000366304 APOL5Q9BWW9 433 aa9.95□□□□□ -0.82
HMGB1P39-201ENST00000366304 PLVAPQ9BX97 442 aa9.95□□□□□ -0.82
HMGB1P39-201ENST00000366304 CNTNAP3Q9BZ76 1288 aa9.95□□□□□ -0.82
HMGB1P39-201ENST00000366304 PXMP2Q9NR77 195 aa9.95□□□□□ -0.82
HMGB1P39-201ENST00000366304 KIAA1217Q5T5P2 1943 aa9.95□□□□□ -0.82
HMGB1P39-201ENST00000366304 KIAA1671Q9BY89 1806 aa9.94□□□□□ -0.82
HMGB1P39-201ENST00000366304 H3BRB1 525 aa9.94□□□□□ -0.82
HMGB1P39-201ENST00000366304 HRO43593 1189 aa9.94□□□□□ -0.82
HMGB1P39-201ENST00000366304 PI15O43692 258 aa9.94□□□□□ -0.82
HMGB1P39-201ENST00000366304 LGALS2P05162 132 aa9.94□□□□□ -0.82
HMGB1P39-201ENST00000366304 SLC3A2P08195 630 aaKnown RBP9.94□□□□□ -0.82
HMGB1P39-201ENST00000366304 MGAT3Q09327 533 aa9.94□□□□□ -0.82
HMGB1P39-201ENST00000366304 CDC37Q16543 378 aaPredicted RBP9.94□□□□□ -0.82
HMGB1P39-201ENST00000366304 ZMYM1Q5SVZ6 1142 aa9.94□□□□□ -0.82
HMGB1P39-201ENST00000366304 C6orf132Q5T0Z8 1188 aa9.94□□□□□ -0.82
HMGB1P39-201ENST00000366304 SYCE2Q6PIF2 218 aa9.94□□□□□ -0.82
HMGB1P39-201ENST00000366304 FEZF2Q8TBJ5 459 aa9.94□□□□□ -0.82
HMGB1P39-201ENST00000366304 LMBR1Q8WVP7 490 aa9.94□□□□□ -0.82
HMGB1P39-201ENST00000366304 APBB2Q92870 758 aa9.94□□□□□ -0.82
HMGB1P39-201ENST00000366304 P2RX5Q93086 422 aa9.94□□□□□ -0.82
HMGB1P39-201ENST00000366304 NACAP1Q9BZK3 213 aa9.94□□□□□ -0.82
HMGB1P39-201ENST00000366304 TUT1Q9H6E5 874 aaKnown RBP9.94□□□□□ -0.82
HMGB1P39-201ENST00000366304 AGO3Q9H9G7 860 aaKnown RBP9.94□□□□□ -0.82
HMGB1P39-201ENST00000366304 HCSTQ9UBK5 93 aa9.94□□□□□ -0.82
HMGB1P39-201ENST00000366304 ANAPC4Q9UJX5 808 aa9.94□□□□□ -0.82
HMGB1P39-201ENST00000366304 RWDD3Q9Y3V2 267 aa9.94□□□□□ -0.82
HMGB1P39-201ENST00000366304 CHD8Q9HCK8 2581 aa9.93□□□□□ -0.82
HMGB1P39-201ENST00000366304 CFAP47Q6ZTR5 3102 aa9.93□□□□□ -0.82
HMGB1P39-201ENST00000366304 B4DLN1 442 aa9.93□□□□□ -0.82
HMGB1P39-201ENST00000366304 PPP1R3GB7ZBB8 358 aa9.93□□□□□ -0.82
HMGB1P39-201ENST00000366304 MAP3K7O43318 606 aa9.93□□□□□ -0.82
HMGB1P39-201ENST00000366304 PPFIA3O75145 1194 aa9.93□□□□□ -0.82
HMGB1P39-201ENST00000366304 CAND2O75155 1236 aa9.93□□□□□ -0.82
HMGB1P39-201ENST00000366304 ZFYP08048 801 aaPredicted RBP9.93□□□□□ -0.82
HMGB1P39-201ENST00000366304 MRPL12P52815 198 aaKnown RBP9.93□□□□□ -0.82
HMGB1P39-201ENST00000366304 ERVFC1P60507 584 aa9.93□□□□□ -0.82
HMGB1P39-201ENST00000366304 PAN2Q504Q3 1202 aaKnown RBP9.93□□□□□ -0.82
HMGB1P39-201ENST00000366304 ARHGEF16Q5VV41 709 aa9.93□□□□□ -0.82
HMGB1P39-201ENST00000366304 CWF19L1Q69YN2 538 aaKnown RBP9.93□□□□□ -0.82
HMGB1P39-201ENST00000366304 ZBTB10Q96DT7 871 aa9.93□□□□□ -0.82
HMGB1P39-201ENST00000366304 PDCD2LQ9BRP1 358 aa9.93□□□□□ -0.82
HMGB1P39-201ENST00000366304 LRRCC1Q9C099 1032 aa9.93□□□□□ -0.82
HMGB1P39-201ENST00000366304 TLE6Q9H808 572 aa9.93□□□□□ -0.82
HMGB1P39-201ENST00000366304 TCP11L1Q9NUJ3 509 aa9.93□□□□□ -0.82
HMGB1P39-201ENST00000366304 USP24Q9UPU5 2620 aa9.93□□□□□ -0.82
HMGB1P39-201ENST00000366304 ABCB11O95342 1321 aa9.92□□□□□ -0.82
HMGB1P39-201ENST00000366304 SPTBN2O15020 2390 aa9.92□□□□□ -0.82
HMGB1P39-201ENST00000366304 C2CD4DB7Z1M9 353 aa9.92□□□□□ -0.82
HMGB1P39-201ENST00000366304 PPP1R11O60927 126 aaPredicted RBP9.92□□□□□ -0.82
HMGB1P39-201ENST00000366304 HMMRO75330 724 aa9.92□□□□□ -0.82
HMGB1P39-201ENST00000366304 ASGR2P07307 311 aa9.92□□□□□ -0.82
HMGB1P39-201ENST00000366304 MYCLP12524 364 aaPredicted RBP9.92□□□□□ -0.82
HMGB1P39-201ENST00000366304 SEMA3FQ13275 785 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms