RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 ELP3Q9H9T3 547 aa10.07□□□□□ -0.8
CALD1-202ENST00000361901 POTEB2H3BUK9 544 aa10.07□□□□□ -0.8
CALD1-202ENST00000361901 NFIBO00712 420 aa10.07□□□□□ -0.8
CALD1-202ENST00000361901 CETN3O15182 167 aa10.07□□□□□ -0.8
CALD1-202ENST00000361901 TUBB4AP04350 444 aa10.07□□□□□ -0.8
CALD1-202ENST00000361901 XKR9Q5GH70 373 aa10.07□□□□□ -0.8
CALD1-202ENST00000361901 CCDC70Q6NSX1 233 aa10.07□□□□□ -0.8
CALD1-202ENST00000361901 SARM1Q6SZW1 724 aa10.07□□□□□ -0.8
CALD1-202ENST00000361901 DAGLBQ8NCG7 672 aa10.07□□□□□ -0.8
CALD1-202ENST00000361901 FAM169AQ9Y6X4 670 aa10.07□□□□□ -0.8
CALD1-202ENST00000361901 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.07□□□□□ -0.8
CALD1-202ENST00000361901 GOLGA6L10A6NI86 522 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 SKAP2O75563 359 aaPredicted RBP10.06□□□□□ -0.8
CALD1-202ENST00000361901 CCDC175P0C221 793 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 RWDD2BP57060 319 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 CNGA4Q8IV77 575 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 VSTM4Q8IW00 320 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 KIRREL3Q8IZU9 778 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 TRPM4Q8TD43 1214 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 RAD54LQ92698 747 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 SPDL1Q96EA4 605 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 SAAL1Q96ER3 474 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 NHSQ6T4R5 1651 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 SMARCA1P28370 1054 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 RANBP1P43487 201 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 ADAM9Q13443 819 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 NCAPHQ15003 741 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 ODR4Q5SWX8 454 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 PPP1R18Q6NYC8 613 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 ZBTB10Q96DT7 871 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 STK17AQ9UEE5 414 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 RWDD2AQ9UIY3 292 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.06□□□□□ -0.8
CALD1-202ENST00000361901 ESYT2A0FGR8 921 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 IPO5O00410 1097 aaKnown RBP10.06□□□□□ -0.8
CALD1-202ENST00000361901 AP1G2O75843 785 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 LMNB1P20700 586 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 BAATQ14032 418 aaPredicted RBP10.06□□□□□ -0.8
CALD1-202ENST00000361901 ZNF569Q5MCW4 686 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 FAM102BQ5T8I3 360 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 FAM178BQ8IXR5 827 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 CCDC42Q96M95 316 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 PURBQ96QR8 312 aaKnown RBP10.06□□□□□ -0.8
CALD1-202ENST00000361901 TCHPQ9BT92 498 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 PARD6BQ9BYG5 372 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 CUEDC2Q9H467 287 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 ROBO3Q96MS0 1386 aa10.06□□□□□ -0.8
CALD1-202ENST00000361901 TNRC6CQ9HCJ0 1690 aaKnown RBP10.06□□□□□ -0.8
CALD1-202ENST00000361901 ZEB2O60315 1214 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 PRPHP41219 470 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 ARMCX5Q6P1M9 558 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 TATDN1Q6P1N9 297 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 CCDC125Q86Z20 511 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 ZNF280CQ8ND82 737 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 FAM76AQ8TAV0 307 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 MRIQ9BWK5 157 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 ETAA1Q9NY74 926 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 UTRNP46939 3433 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 SNED1Q8TER0 1413 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 DCAF8L1A6NGE4 600 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 SOWAHDA6NJG2 315 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 CCNE1P24864 410 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 USP11P51784 963 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 GRB10Q13322 594 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 MAP9Q49MG5 647 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 CEP55Q53EZ4 464 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 TCP11X2Q5H9J9 407 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 C9orf131Q5VYM1 1079 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 ANKRD40Q6AI12 368 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 PDXDC2PQ6P474 469 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 RRAGAQ7L523 313 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 APOBEC3FQ8IUX4 373 aaKnown RBP10.05□□□□□ -0.8
CALD1-202ENST00000361901 EMILIN3Q9NT22 766 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 PSD3Q9NYI0 1048 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 MACROD2A1Z1Q3 448 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 FKBP1AP62942 108 aaKnown RBP10.05□□□□□ -0.8
CALD1-202ENST00000361901 STXBP4Q6ZWJ1 553 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 KCNK18Q7Z418 384 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 GMCL1Q96IK5 515 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 EIF2AK1Q9BQI3 630 aaKnown RBP10.05□□□□□ -0.8
CALD1-202ENST00000361901 GINS2Q9Y248 185 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 DUOX1Q9NRD9 1551 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 PPP1R3GB7ZBB8 358 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 ADM5C9JUS6 153 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 FAM86B1E9PN63 330 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 PEX10O60683 326 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 FAM86B2P0C5J1 330 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 MTMR1Q13613 665 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 ARMC3Q5W041 872 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 FAM83AQ86UY5 434 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 SFR1Q86XK3 245 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 BPIFA3Q9BQP9 254 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 PCIF1Q9H4Z3 704 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 KIF9Q9HAQ2 790 aa10.05□□□□□ -0.8
CALD1-202ENST00000361901 MSH4O15457 936 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 ARHGAP6O43182 974 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 EXOC3O60645 756 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 KCNA3P22001 575 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 NR2F2P24468 414 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 RPS12P25398 132 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms