RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 OSBPL5Q9H0X9 879 aaPredicted RBP14.6□□□□□ -0.07
LDB3-202ENST00000361373 C19orf81C9J6K1 198 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 QARSP47897 775 aaKnown RBP14.6□□□□□ -0.07
LDB3-202ENST00000361373 PEX3P56589 373 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 C11orf57Q6ZUT1 292 aaPredicted RBP14.6□□□□□ -0.07
LDB3-202ENST00000361373 GRAMD1CQ8IYS0 662 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 UBE2TQ9NPD8 197 aaPredicted RBP14.6□□□□□ -0.07
LDB3-202ENST00000361373 USP32Q8NFA0 1604 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 CEMIPQ8WUJ3 1361 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 H7C0C1 242 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 RNF40O75150 1001 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 ATP5OP48047 213 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 RBL2Q08999 1139 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 CCDC62Q6P9F0 684 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 VSTM4Q8IW00 320 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 CCHCR1Q8TD31 782 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 PSPC1Q8WXF1 523 aaKnown RBP14.6□□□□□ -0.07
LDB3-202ENST00000361373 CCDC68Q9H2F9 335 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 DONSONQ9NYP3 566 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 DAGLAQ9Y4D2 1042 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 MYO3AQ8NEV4 1616 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 NTSR2O95665 410 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 SRGAP2CP0DJJ0 459 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 FCER1AP12319 257 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 TKFCQ3LXA3 575 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 TTC39CQ8N584 583 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 ZNF526Q8TF50 670 aaPredicted RBP14.6□□□□□ -0.07
LDB3-202ENST00000361373 EEF2KMTQ96G04 330 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 SERPINA10Q9UK55 444 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 ARL4AP40617 200 aa14.59□□□□□ -0.07
LDB3-202ENST00000361373 PADI6Q6TGC4 694 aa14.59□□□□□ -0.07
LDB3-202ENST00000361373 NLRP4Q96MN2 994 aa14.59□□□□□ -0.07
LDB3-202ENST00000361373 FAM114A2Q9NRY5 505 aa14.59□□□□□ -0.07
LDB3-202ENST00000361373 NYAP2Q9P242 653 aa14.59□□□□□ -0.07
LDB3-202ENST00000361373 NXF1Q9UBU9 619 aaKnown RBP14.59□□□□□ -0.07
LDB3-202ENST00000361373 KDM6AO15550 1401 aaPredicted RBP14.59□□□□□ -0.07
LDB3-202ENST00000361373 RPS12P25398 132 aaKnown RBP14.59□□□□□ -0.07
LDB3-202ENST00000361373 XXYLT1Q8NBI6 393 aa14.59□□□□□ -0.07
LDB3-202ENST00000361373 LINC00116Q8NCU8 138 aa14.59□□□□□ -0.07
LDB3-202ENST00000361373 PIK3C2BO00750 1634 aa14.59□□□□□ -0.07
LDB3-202ENST00000361373 USP17L6PQ6QN14 398 aa14.59□□□□□ -0.07
LDB3-202ENST00000361373 ADGRF4Q8IZF3 695 aa14.59□□□□□ -0.07
LDB3-202ENST00000361373 GTF3C2Q8WUA4 911 aaPredicted RBP14.59□□□□□ -0.07
LDB3-202ENST00000361373 RAD54LQ92698 747 aa14.59□□□□□ -0.07
LDB3-202ENST00000361373 PBKQ96KB5 322 aa14.59□□□□□ -0.07
LDB3-202ENST00000361373 PFDN4Q9NQP4 134 aa14.59□□□□□ -0.07
LDB3-202ENST00000361373 SETD1BQ9UPS6 1966 aaKnown RBP14.59□□□□□ -0.07
LDB3-202ENST00000361373 SLC26A4O43511 780 aa14.59□□□□□ -0.07
LDB3-202ENST00000361373 PSMC5P62195 406 aa14.59□□□□□ -0.07
LDB3-202ENST00000361373 TCP11X2Q5H9J9 407 aa14.59□□□□□ -0.07
LDB3-202ENST00000361373 GINM1Q9NU53 330 aa14.59□□□□□ -0.07
LDB3-202ENST00000361373 WDR46O15213 610 aaKnown RBP14.58□□□□□ -0.07
LDB3-202ENST00000361373 CLDN3O15551 220 aa14.58□□□□□ -0.07
LDB3-202ENST00000361373 KRT10P13645 584 aa14.58□□□□□ -0.07
LDB3-202ENST00000361373 GARSP41250 739 aaKnown RBP14.58□□□□□ -0.07
LDB3-202ENST00000361373 IFRD2Q12894 506 aaPredicted RBP14.58□□□□□ -0.07
LDB3-202ENST00000361373 ZNF667Q5HYK9 610 aa14.58□□□□□ -0.07
LDB3-202ENST00000361373 VSIG1Q86XK7 387 aa14.58□□□□□ -0.07
LDB3-202ENST00000361373 RABGGTAQ92696 567 aa14.58□□□□□ -0.07
LDB3-202ENST00000361373 AFG3L2Q9Y4W6 797 aa14.58□□□□□ -0.07
LDB3-202ENST00000361373 SCINQ9Y6U3 715 aa14.58□□□□□ -0.07
LDB3-202ENST00000361373 TROVE2P10155 538 aaKnown RBP eCLIP14.58□□□□□ -0.08
LDB3-202ENST00000361373 Q3C1V9 767 aa14.58□□□□□ -0.08
LDB3-202ENST00000361373 MAGOHBQ96A72 148 aaKnown RBP14.58□□□□□ -0.08
LDB3-202ENST00000361373 DDX23Q9BUQ8 820 aaKnown RBP14.58□□□□□ -0.08
LDB3-202ENST00000361373 SLC38A10Q9HBR0 1119 aa14.58□□□□□ -0.08
LDB3-202ENST00000361373 AKR1B1P15121 316 aa14.58□□□□□ -0.08
LDB3-202ENST00000361373 MMP14P50281 582 aa14.58□□□□□ -0.08
LDB3-202ENST00000361373 SCARF1Q14162 830 aa14.58□□□□□ -0.08
LDB3-202ENST00000361373 ANKRD20A3Q5VUR7 823 aa14.58□□□□□ -0.08
LDB3-202ENST00000361373 SDCCAG8Q86SQ7 713 aaPredicted RBP14.58□□□□□ -0.08
LDB3-202ENST00000361373 ZBTB33Q86T24 672 aa14.58□□□□□ -0.08
LDB3-202ENST00000361373 SIX6OS1Q8N1H7 587 aa14.58□□□□□ -0.08
LDB3-202ENST00000361373 MICALL1Q8N3F8 863 aa14.58□□□□□ -0.08
LDB3-202ENST00000361373 HDLBPQ00341 1268 aaKnown RBP14.58□□□□□ -0.08
LDB3-202ENST00000361373 ITKQ08881 620 aa14.58□□□□□ -0.08
LDB3-202ENST00000361373 RHOT2Q8IXI1 618 aa14.58□□□□□ -0.08
LDB3-202ENST00000361373 ANKRD13CQ8N6S4 541 aa14.58□□□□□ -0.08
LDB3-202ENST00000361373 ZNF302Q9NR11 478 aa14.58□□□□□ -0.08
LDB3-202ENST00000361373 SAMSN1Q9NSI8 373 aaKnown RBP14.58□□□□□ -0.08
LDB3-202ENST00000361373 GOLGA8KD6RF30 607 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 PGRMC1O00264 195 aaKnown RBP14.57□□□□□ -0.08
LDB3-202ENST00000361373 LRRN2O75325 713 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 STX2P32856 288 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 SNAP25P60880 206 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 PLCB4Q15147 1175 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 CABS1Q96KC9 395 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 MTMR4Q9NYA4 1195 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 ANXA13P27216 316 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 MKRN3Q13064 507 aaKnown RBP14.57□□□□□ -0.08
LDB3-202ENST00000361373 FBXO33Q7Z6M2 555 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 RFX6Q8HWS3 928 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 PPP4R1Q8TF05 950 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 TIPINQ9BVW5 301 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 BCAP29Q9UHQ4 241 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 UBN2Q6ZU65 1347 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 IPO5O00410 1097 aaKnown RBP14.57□□□□□ -0.08
LDB3-202ENST00000361373 GFPT2O94808 682 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 CHRNA5P30532 468 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 ARHGAP25P42331 645 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms