RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 ERLIN1O75477 346 aa24.95■■□□□ 1.58
LDB1-201ENST00000361198 RSPH10BP0C881 870 aa24.95■■□□□ 1.58
LDB1-201ENST00000361198 CDK17Q00537 523 aa24.95■■□□□ 1.58
LDB1-201ENST00000361198 TRAPPC11Q7Z392 1133 aa24.95■■□□□ 1.58
LDB1-201ENST00000361198 CCDC170Q8IYT3 715 aa24.95■■□□□ 1.58
LDB1-201ENST00000361198 SLC5A5Q92911 643 aa24.95■■□□□ 1.58
LDB1-201ENST00000361198 RUSC1Q9BVN2 902 aa24.95■■□□□ 1.58
LDB1-201ENST00000361198 POLD4Q9HCU8 107 aa24.95■■□□□ 1.58
LDB1-201ENST00000361198 ZNF536O15090 1300 aa24.94■■□□□ 1.58
LDB1-201ENST00000361198 SLITRK3O94933 977 aa24.94■■□□□ 1.58
LDB1-201ENST00000361198 EYA4O95677 639 aa24.94■■□□□ 1.58
LDB1-201ENST00000361198 HNRNPH3P31942 346 aaKnown RBP24.94■■□□□ 1.58
LDB1-201ENST00000361198 KRT83P78385 493 aa24.94■■□□□ 1.58
LDB1-201ENST00000361198 KCNMA1Q12791 1236 aa24.94■■□□□ 1.58
LDB1-201ENST00000361198 TNIP1Q15025 636 aa24.94■■□□□ 1.58
LDB1-201ENST00000361198 HDXQ7Z353 690 aa24.94■■□□□ 1.58
LDB1-201ENST00000361198 PIGOQ8TEQ8 1089 aa24.94■■□□□ 1.58
LDB1-201ENST00000361198 SMCR8Q8TEV9 937 aaPredicted RBP24.94■■□□□ 1.58
LDB1-201ENST00000361198 BCAS3Q9H6U6 928 aa24.94■■□□□ 1.58
LDB1-201ENST00000361198 ZNF280AP59817 542 aaPredicted RBP24.93■■□□□ 1.58
LDB1-201ENST00000361198 PPP2R5CQ13362 524 aa24.93■■□□□ 1.58
LDB1-201ENST00000361198 EHMT1Q9H9B1 1298 aa24.93■■□□□ 1.58
LDB1-201ENST00000361198 EIF3CLB5ME19 914 aaKnown RBP24.93■■□□□ 1.58
LDB1-201ENST00000361198 ICAM1P05362 532 aa24.93■■□□□ 1.58
LDB1-201ENST00000361198 PLEKP08567 350 aaPredicted RBP24.93■■□□□ 1.58
LDB1-201ENST00000361198 MARSP56192 900 aaKnown RBP24.93■■□□□ 1.58
LDB1-201ENST00000361198 ADAM9Q13443 819 aa24.93■■□□□ 1.58
LDB1-201ENST00000361198 TPH2Q8IWU9 490 aa24.93■■□□□ 1.58
LDB1-201ENST00000361198 ZC3H3Q8IXZ2 948 aaKnown RBP24.93■■□□□ 1.58
LDB1-201ENST00000361198 DYDC2Q96IM9 177 aa24.93■■□□□ 1.58
LDB1-201ENST00000361198 EIF3CQ99613 913 aaKnown RBP24.93■■□□□ 1.58
LDB1-201ENST00000361198 PPP1R1BQ9UD71 204 aaPredicted RBP24.93■■□□□ 1.58
LDB1-201ENST00000361198 CCPG1Q9ULG6 757 aa24.93■■□□□ 1.58
LDB1-201ENST00000361198 ERICH4A6NGS2 130 aa24.92■■□□□ 1.58
LDB1-201ENST00000361198 GNA14O95837 355 aa24.92■■□□□ 1.58
LDB1-201ENST00000361198 ARP10275 920 aa24.92■■□□□ 1.58
LDB1-201ENST00000361198 DGKZQ13574 1117 aa24.92■■□□□ 1.58
LDB1-201ENST00000361198 EPM2AIP1Q7L775 607 aaPredicted RBP24.92■■□□□ 1.58
LDB1-201ENST00000361198 TRIM59Q8IWR1 403 aa24.92■■□□□ 1.58
LDB1-201ENST00000361198 GAS7O60861 476 aa24.92■■□□□ 1.58
LDB1-201ENST00000361198 HOXD13P35453 343 aa24.92■■□□□ 1.58
LDB1-201ENST00000361198 EDRF1Q3B7T1 1238 aa24.92■■□□□ 1.58
LDB1-201ENST00000361198 CCDC122Q5T0U0 273 aa24.92■■□□□ 1.58
LDB1-201ENST00000361198 PPP4R3CPQ6ZMV5 832 aa24.92■■□□□ 1.58
LDB1-201ENST00000361198 DEFB129Q9H1M3 183 aa24.92■■□□□ 1.58
LDB1-201ENST00000361198 TUFT1Q9NNX1 390 aa24.92■■□□□ 1.58
LDB1-201ENST00000361198 ABCB6Q9NP58 842 aa24.92■■□□□ 1.58
LDB1-201ENST00000361198 ARHGAP20Q9P2F6 1191 aa24.92■■□□□ 1.58
LDB1-201ENST00000361198 BRCA1P38398 1863 aaKnown RBP24.92■■□□□ 1.58
LDB1-201ENST00000361198 RCCD1A6NED2 376 aa24.91■■□□□ 1.58
LDB1-201ENST00000361198 ZBTB39O15060 712 aa24.91■■□□□ 1.58
LDB1-201ENST00000361198 MYBP10242 640 aa24.91■■□□□ 1.58
LDB1-201ENST00000361198 VSNL1P62760 191 aa24.91■■□□□ 1.58
LDB1-201ENST00000361198 CYP27A1Q02318 531 aa24.91■■□□□ 1.58
LDB1-201ENST00000361198 TNFAIP1Q13829 316 aa24.91■■□□□ 1.58
LDB1-201ENST00000361198 PAPD7Q5XG87 772 aaKnown RBP24.91■■□□□ 1.58
LDB1-201ENST00000361198 RINT1Q6NUQ1 792 aa24.91■■□□□ 1.58
LDB1-201ENST00000361198 PRPF38AQ8NAV1 312 aaKnown RBP24.91■■□□□ 1.58
LDB1-201ENST00000361198 BAP1Q92560 729 aa24.91■■□□□ 1.58
LDB1-201ENST00000361198 ZNF577Q9BSK1 485 aa24.91■■□□□ 1.58
LDB1-201ENST00000361198 ASTN2O75129 1339 aaPredicted RBP24.91■■□□□ 1.58
LDB1-201ENST00000361198 LRRC53A6NM62 1247 aa24.91■■□□□ 1.58
LDB1-201ENST00000361198 H3BQF6 201 aa24.91■■□□□ 1.58
LDB1-201ENST00000361198 PRELPP51888 382 aa24.91■■□□□ 1.58
LDB1-201ENST00000361198 KNOP1Q1ED39 458 aaKnown RBP24.91■■□□□ 1.58
LDB1-201ENST00000361198 WDR93Q6P2C0 686 aa24.91■■□□□ 1.58
LDB1-201ENST00000361198 RRAGAQ7L523 313 aa24.91■■□□□ 1.58
LDB1-201ENST00000361198 SAMD7Q7Z3H4 446 aa24.91■■□□□ 1.58
LDB1-201ENST00000361198 KIAA1328Q86T90 577 aa24.91■■□□□ 1.58
LDB1-201ENST00000361198 KCTD17Q8N5Z5 321 aa24.91■■□□□ 1.58
LDB1-201ENST00000361198 NOA1Q8NC60 698 aaKnown RBP24.91■■□□□ 1.58
LDB1-201ENST00000361198 NEK11Q8NG66 645 aa24.91■■□□□ 1.58
LDB1-201ENST00000361198 CCDC42Q96M95 316 aa24.91■■□□□ 1.58
LDB1-201ENST00000361198 LACRTQ9GZZ8 138 aa24.91■■□□□ 1.58
LDB1-201ENST00000361198 GBP3Q9H0R5 595 aa24.91■■□□□ 1.58
LDB1-201ENST00000361198 NFIBO00712 420 aa24.9■■□□□ 1.58
LDB1-201ENST00000361198 ZNF263O14978 683 aa24.9■■□□□ 1.58
LDB1-201ENST00000361198 PRPF6O94906 941 aaKnown RBP24.9■■□□□ 1.58
LDB1-201ENST00000361198 RHOXF2BP0C7M4 288 aa24.9■■□□□ 1.58
LDB1-201ENST00000361198 NR2F2P24468 414 aa24.9■■□□□ 1.58
LDB1-201ENST00000361198 HSD17B4P51659 736 aa24.9■■□□□ 1.58
LDB1-201ENST00000361198 EHBP1Q8NDI1 1231 aa24.9■■□□□ 1.58
LDB1-201ENST00000361198 RHOXF2Q9BQY4 288 aa24.9■■□□□ 1.58
LDB1-201ENST00000361198 COL20A1Q9P218 1284 aa24.9■■□□□ 1.58
LDB1-201ENST00000361198 TRAF3IP3Q9Y228 551 aa24.9■■□□□ 1.58
LDB1-201ENST00000361198 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.9■■□□□ 1.586e-17■□□□□ 8.1
LDB1-201ENST00000361198 RBBP6Q7Z6E9 1792 aaKnown RBP24.9■■□□□ 1.58
LDB1-201ENST00000361198 WDR46O15213 610 aaKnown RBP24.89■■□□□ 1.58
LDB1-201ENST00000361198 IPO7O95373 1038 aaKnown RBP24.89■■□□□ 1.58
LDB1-201ENST00000361198 POLD1P28340 1107 aa24.89■■□□□ 1.58
LDB1-201ENST00000361198 JAKMIP2Q96AA8 810 aa24.89■■□□□ 1.58
LDB1-201ENST00000361198 HOOK2Q96ED9 719 aa24.89■■□□□ 1.58
LDB1-201ENST00000361198 CALCOCO1Q9P1Z2 691 aa24.89■■□□□ 1.58
LDB1-201ENST00000361198 SFI1A8K8P3 1242 aa24.89■■□□□ 1.57
LDB1-201ENST00000361198 CETN3O15182 167 aa24.89■■□□□ 1.57
LDB1-201ENST00000361198 TBCAO75347 108 aaKnown RBP24.89■■□□□ 1.57
LDB1-201ENST00000361198 KRT26Q7Z3Y9 468 aa24.89■■□□□ 1.57
LDB1-201ENST00000361198 GPIHBP1Q8IV16 184 aa24.89■■□□□ 1.57
LDB1-201ENST00000361198 UNC45AQ9H3U1 944 aa24.89■■□□□ 1.57
LDB1-201ENST00000361198 KRT86O43790 486 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms