RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 DCP1AQ9NPI6 582 aaPredicted RBP8.26□□□□□ -1.09
CLCN3-202ENST00000360642 NARFQ9UHQ1 456 aa8.26□□□□□ -1.09
CLCN3-202ENST00000360642 TRIM75PA6NK02 468 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 TMEM232C9JQI7 657 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 PRDM1O75626 825 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 ASMTLO95671 621 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 TUBB4AP04350 444 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 PTPN21Q16825 1174 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 CFAP100Q494V2 611 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 SBK1Q52WX2 424 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 SMARCE1Q969G3 411 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 NYXQ9GZU5 481 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 RASSF4Q9H2L5 321 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 ZDHHC3Q9NYG2 299 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 LAMB1P07942 1786 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 CNTNAP5Q8WYK1 1306 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 A0A087X0B3 334 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 ECEL1O95672 775 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 TM4SF1P30408 202 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 CT47A1Q5JQC4 288 aaPredicted RBP8.25□□□□□ -1.09
CLCN3-202ENST00000360642 TXNDC11Q6PKC3 985 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 TRIM67Q6ZTA4 783 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 TMEM139Q8IV31 216 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 FMNL3Q8IVF7 1028 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 GRAMD1CQ8IYS0 662 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 LACRTQ9GZZ8 138 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 L2HGDHQ9H9P8 463 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 ATP8A2Q9NTI2 1148 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 DACH1Q9UI36 760 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 KIAA1551Q9HCM1 1747 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 RPLP1P05386 114 aaKnown RBP8.25□□□□□ -1.09
CLCN3-202ENST00000360642 HIBADHP31937 336 aaKnown RBP8.25□□□□□ -1.09
CLCN3-202ENST00000360642 RNF144AP50876 292 aaPredicted RBP8.25□□□□□ -1.09
CLCN3-202ENST00000360642 CCDC93Q567U6 631 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 ODR4Q5SWX8 454 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 CYP4X1Q8N118 509 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 SRBD1Q8N5C6 995 aaKnown RBP8.25□□□□□ -1.09
CLCN3-202ENST00000360642 FERMT2Q96AC1 680 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 NECAB3Q96P71 396 aaPredicted RBP8.25□□□□□ -1.09
CLCN3-202ENST00000360642 TSEN34Q9BSV6 310 aaKnown RBP8.25□□□□□ -1.09
CLCN3-202ENST00000360642 NT5C1AQ9BXI3 368 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 ANKRD2Q9GZV1 360 aa8.25□□□□□ -1.09
CLCN3-202ENST00000360642 ZNF215Q9UL58 517 aaPredicted RBP8.25□□□□□ -1.09
CLCN3-202ENST00000360642 MAST2Q6P0Q8 1798 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 hCG_1642624A0A1W2PR95 340 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 NRDCO43847 1150 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 RPS6KA4O75676 772 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 BMP15O95972 392 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 SLFN14P0C7P3 912 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 WDR75Q8IWA0 830 aaKnown RBP8.24□□□□□ -1.09
CLCN3-202ENST00000360642 EPSTI1Q96J88 318 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 NFE2L3Q9Y4A8 694 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 MYH13Q9UKX3 1938 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 PDPK1O15530 556 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 NMT2O60551 498 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 S100BP04271 92 aaPredicted RBP8.24□□□□□ -1.09
CLCN3-202ENST00000360642 TOP1P11387 765 aaKnown RBP8.24□□□□□ -1.09
CLCN3-202ENST00000360642 PRDX5P30044 214 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 PLCD1P51178 756 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 LRRC41Q15345 812 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 SOGA3Q5TF21 947 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 YOD1Q5VVQ6 348 aaPredicted RBP8.24□□□□□ -1.09
CLCN3-202ENST00000360642 PTF1AQ7RTS3 328 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 FCHSD1Q86WN1 690 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 TRIM42Q8IWZ5 723 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 PDILTQ8N807 584 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 ERO1AQ96HE7 468 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 CRNKL1Q9BZJ0 848 aaKnown RBP8.24□□□□□ -1.09
CLCN3-202ENST00000360642 ARPP21Q9UBL0 812 aaPredicted RBP8.24□□□□□ -1.09
CLCN3-202ENST00000360642 DNMT3LQ9UJW3 386 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 CCP110O43303 1012 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 EIF6P56537 245 aaKnown RBP8.24□□□□□ -1.09
CLCN3-202ENST00000360642 ATP2C1P98194 919 aaPredicted RBP8.24□□□□□ -1.09
CLCN3-202ENST00000360642 NR1I3Q14994 352 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 ZNF827Q17R98 1081 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 HGSNATQ68CP4 663 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 RCSD1Q6JBY9 416 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 TRIM65Q6PJ69 517 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 APTXQ7Z2E3 356 aaKnown RBP8.24□□□□□ -1.09
CLCN3-202ENST00000360642 SLC51AQ86UW1 340 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 LSRQ86X29 649 aaPredicted RBP8.24□□□□□ -1.09
CLCN3-202ENST00000360642 REXO1L1PQ8IX06 675 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 SNIP1Q8TAD8 396 aaKnown RBP8.24□□□□□ -1.09
CLCN3-202ENST00000360642 PAGE5Q96GU1 130 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 PNMA5Q96PV4 448 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 ACTR10Q9NZ32 417 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 TFCP2L1Q9NZI6 479 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 PTCH2Q9Y6C5 1203 aa8.24□□□□□ -1.09
CLCN3-202ENST00000360642 TTLL8A6PVC2 850 aa8.23□□□□□ -1.09
CLCN3-202ENST00000360642 GPR25O00155 361 aa8.23□□□□□ -1.09
CLCN3-202ENST00000360642 ENPP3O14638 875 aa8.23□□□□□ -1.09
CLCN3-202ENST00000360642 PSAPP07602 524 aa8.23□□□□□ -1.09
CLCN3-202ENST00000360642 CNGA1P29973 690 aa8.23□□□□□ -1.09
CLCN3-202ENST00000360642 SYT10Q6XYQ8 523 aa8.23□□□□□ -1.09
CLCN3-202ENST00000360642 TXNRD3Q86VQ6 643 aa8.23□□□□□ -1.09
CLCN3-202ENST00000360642 FEZ1Q99689 392 aa8.23□□□□□ -1.09
CLCN3-202ENST00000360642 GSX2Q9BZM3 304 aa8.23□□□□□ -1.09
CLCN3-202ENST00000360642 SIRPGQ9P1W8 387 aa8.23□□□□□ -1.09
CLCN3-202ENST00000360642 CGNQ9P2M7 1197 aaKnown RBP8.23□□□□□ -1.09
CLCN3-202ENST00000360642 SRP68Q9UHB9 627 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms