RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 GPR101Q96P66 508 aaPredicted RBP16.33■□□□□ 0.2
UBAP1-202ENST00000359544 ZSCAN10Q96SZ4 725 aaPredicted RBP16.33■□□□□ 0.2
UBAP1-202ENST00000359544 PSMD1Q99460 953 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.33■□□□□ 0.2
UBAP1-202ENST00000359544 NOP53Q9NZM5 478 aaKnown RBP16.33■□□□□ 0.2
UBAP1-202ENST00000359544 PCDHGC5Q9Y5F6 944 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 PHF20L1A8MW92 1017 aa16.32■□□□□ 0.2
UBAP1-202ENST00000359544 EPHB6O15197 1021 aa16.32■□□□□ 0.2
UBAP1-202ENST00000359544 PDE8BO95263 885 aa16.32■□□□□ 0.2
UBAP1-202ENST00000359544 FGFR1OPO95684 399 aaKnown RBP16.32■□□□□ 0.2
UBAP1-202ENST00000359544 TRADDQ15628 312 aa16.32■□□□□ 0.2
UBAP1-202ENST00000359544 TDRD12Q587J7 1177 aaKnown RBP16.32■□□□□ 0.2
UBAP1-202ENST00000359544 AP1ARQ63HQ0 302 aa16.32■□□□□ 0.2
UBAP1-202ENST00000359544 CDCA2Q69YH5 1023 aaPredicted RBP16.32■□□□□ 0.2
UBAP1-202ENST00000359544 BZW1Q7L1Q6 419 aaKnown RBP16.32■□□□□ 0.2
UBAP1-202ENST00000359544 CACNA2D4Q7Z3S7 1137 aa16.32■□□□□ 0.2
UBAP1-202ENST00000359544 SPATA5Q8NB90 893 aa16.32■□□□□ 0.2
UBAP1-202ENST00000359544 SAAL1Q96ER3 474 aa16.32■□□□□ 0.2
UBAP1-202ENST00000359544 CNTNAP5Q8WYK1 1306 aa16.32■□□□□ 0.2
UBAP1-202ENST00000359544 ANP32DO95626 131 aa16.32■□□□□ 0.2
UBAP1-202ENST00000359544 FTCDO95954 541 aa16.32■□□□□ 0.2
UBAP1-202ENST00000359544 CALML3P27482 149 aa16.32■□□□□ 0.2
UBAP1-202ENST00000359544 MAGOHP61326 146 aaKnown RBP16.32■□□□□ 0.2
UBAP1-202ENST00000359544 SLC9C1Q4G0N8 1177 aa16.32■□□□□ 0.2
UBAP1-202ENST00000359544 LCORLQ8N3X6 602 aa16.32■□□□□ 0.2
UBAP1-202ENST00000359544 ENAHQ8N8S7 591 aaPredicted RBP16.32■□□□□ 0.2
UBAP1-202ENST00000359544 BAP1Q92560 729 aa16.32■□□□□ 0.2
UBAP1-202ENST00000359544 MAGOHBQ96A72 148 aaKnown RBP16.32■□□□□ 0.2
UBAP1-202ENST00000359544 EEF2KMTQ96G04 330 aa16.32■□□□□ 0.2
UBAP1-202ENST00000359544 XPO6Q96QU8 1125 aaKnown RBP16.32■□□□□ 0.2
UBAP1-202ENST00000359544 FAM129AQ9BZQ8 928 aa16.32■□□□□ 0.2
UBAP1-202ENST00000359544 TAOK3Q9H2K8 898 aa16.32■□□□□ 0.2
UBAP1-202ENST00000359544 LIN7AO14910 233 aaPredicted RBP16.31■□□□□ 0.2
UBAP1-202ENST00000359544 ASAP2O43150 1006 aa16.31■□□□□ 0.2
UBAP1-202ENST00000359544 SCG2P13521 617 aa16.31■□□□□ 0.2
UBAP1-202ENST00000359544 ITGA6P23229 1130 aa16.31■□□□□ 0.2
UBAP1-202ENST00000359544 DNA2P51530 1060 aa16.31■□□□□ 0.2
UBAP1-202ENST00000359544 CCDC152Q4G0S7 254 aa16.31■□□□□ 0.2
UBAP1-202ENST00000359544 ERMARDQ5T6L9 678 aa16.31■□□□□ 0.2
UBAP1-202ENST00000359544 CNNM4Q6P4Q7 775 aa16.31■□□□□ 0.2
UBAP1-202ENST00000359544 THOC1Q96FV9 657 aaKnown RBP16.31■□□□□ 0.2
UBAP1-202ENST00000359544 SKAP2O75563 359 aaPredicted RBP16.3■□□□□ 0.2
UBAP1-202ENST00000359544 CCDC178Q5BJE1 867 aa16.3■□□□□ 0.2
UBAP1-202ENST00000359544 STAG2Q8N3U4 1231 aa16.3■□□□□ 0.2
UBAP1-202ENST00000359544 RNF217Q8TC41 542 aa16.3■□□□□ 0.2
UBAP1-202ENST00000359544 TCP11Q8WWU5 503 aa16.3■□□□□ 0.2
UBAP1-202ENST00000359544 PBKQ96KB5 322 aa16.3■□□□□ 0.2
UBAP1-202ENST00000359544 CALR3Q96L12 384 aaKnown RBP16.3■□□□□ 0.2
UBAP1-202ENST00000359544 ANAPC4Q9UJX5 808 aa16.3■□□□□ 0.2
UBAP1-202ENST00000359544 FBXL5Q9UKA1 691 aa16.3■□□□□ 0.2
UBAP1-202ENST00000359544 F8W031 263 aaPredicted RBP16.3■□□□□ 0.2
UBAP1-202ENST00000359544 EIF3BP55884 814 aaKnown RBP16.3■□□□□ 0.2
UBAP1-202ENST00000359544 EHHADHQ08426 723 aa16.3■□□□□ 0.2
UBAP1-202ENST00000359544 ADCY2Q08462 1091 aa16.3■□□□□ 0.2
UBAP1-202ENST00000359544 KRT71Q3SY84 523 aa16.3■□□□□ 0.2
UBAP1-202ENST00000359544 CAPRIN2Q6IMN6 1127 aaKnown RBP16.3■□□□□ 0.2
UBAP1-202ENST00000359544 SYN2Q92777 582 aaPredicted RBP16.3■□□□□ 0.2
UBAP1-202ENST00000359544 ATP6V0A2Q9Y487 856 aa16.3■□□□□ 0.2
UBAP1-202ENST00000359544 BHMG1C9JSJ3 638 aaPredicted RBP16.29■□□□□ 0.2
UBAP1-202ENST00000359544 BACH1O14867 736 aa16.29■□□□□ 0.2
UBAP1-202ENST00000359544 CLTAP09496 248 aa16.29■□□□□ 0.2
UBAP1-202ENST00000359544 RPS8P62241 208 aaKnown RBP16.29■□□□□ 0.2
UBAP1-202ENST00000359544 ZNF784Q8NCA9 323 aaPredicted RBP16.29■□□□□ 0.2
UBAP1-202ENST00000359544 KIF9Q9HAQ2 790 aa16.29■□□□□ 0.2
UBAP1-202ENST00000359544 GOLGA6L10A0A0M3HER8 536 aa16.29■□□□□ 0.2
UBAP1-202ENST00000359544 SERPING1P05155 500 aa16.29■□□□□ 0.2
UBAP1-202ENST00000359544 ASIC1P78348 528 aa16.29■□□□□ 0.2
UBAP1-202ENST00000359544 TROAPQ12815 778 aa16.29■□□□□ 0.2
UBAP1-202ENST00000359544 STK4Q13043 487 aa16.29■□□□□ 0.2
UBAP1-202ENST00000359544 ZNF268Q14587 947 aaPredicted RBP16.29■□□□□ 0.2
UBAP1-202ENST00000359544 PUM3Q15397 648 aaKnown RBP16.29■□□□□ 0.2
UBAP1-202ENST00000359544 SPDYCQ5MJ68 293 aa16.29■□□□□ 0.2
UBAP1-202ENST00000359544 HGSNATQ68CP4 663 aa16.29■□□□□ 0.2
UBAP1-202ENST00000359544 PNMA8AQ86V59 439 aaPredicted RBP16.29■□□□□ 0.2
UBAP1-202ENST00000359544 L3MBTL3Q96JM7 780 aaPredicted RBP16.29■□□□□ 0.2
UBAP1-202ENST00000359544 C7orf25Q9BPX7 421 aa16.29■□□□□ 0.2
UBAP1-202ENST00000359544 TRIM9Q9C026 710 aa16.29■□□□□ 0.2
UBAP1-202ENST00000359544 SLC39A2Q9NP94 309 aa16.29■□□□□ 0.2
UBAP1-202ENST00000359544 CTNND1O60716 968 aaKnown RBP16.28■□□□□ 0.2
UBAP1-202ENST00000359544 ALADP13716 330 aa16.28■□□□□ 0.2
UBAP1-202ENST00000359544 LMNB1P20700 586 aa16.28■□□□□ 0.2
UBAP1-202ENST00000359544 AMPD3Q01432 767 aa16.28■□□□□ 0.2
UBAP1-202ENST00000359544 RPS6KA1Q15418 735 aa16.28■□□□□ 0.2
UBAP1-202ENST00000359544 HOOK3Q86VS8 718 aa16.28■□□□□ 0.2
UBAP1-202ENST00000359544 ACTRT1Q8TDG2 376 aa16.28■□□□□ 0.2
UBAP1-202ENST00000359544 SCFD2Q8WU76 684 aa16.28■□□□□ 0.2
UBAP1-202ENST00000359544 TLCD1Q96CP7 247 aa16.28■□□□□ 0.2
UBAP1-202ENST00000359544 MOV10L1Q9BXT6 1211 aaKnown RBP16.28■□□□□ 0.2
UBAP1-202ENST00000359544 SAMD15Q9P1V8 674 aa16.28■□□□□ 0.2
UBAP1-202ENST00000359544 ARAP2Q8WZ64 1704 aa16.28■□□□□ 0.2
UBAP1-202ENST00000359544 ANKRD33BA6NCL7 494 aa16.28■□□□□ 0.2
UBAP1-202ENST00000359544 MINDY4BA8MYZ0 360 aa16.28■□□□□ 0.2
UBAP1-202ENST00000359544 LAD1O00515 517 aa16.28■□□□□ 0.2
UBAP1-202ENST00000359544 BBOX1O75936 387 aa16.28■□□□□ 0.2
UBAP1-202ENST00000359544 SMNDC1O75940 238 aaKnown RBP eCLIP16.28■□□□□ 0.2
UBAP1-202ENST00000359544 RNASE9P60153 205 aaKnown RBP16.28■□□□□ 0.2
UBAP1-202ENST00000359544 PFKFB3Q16875 520 aaPredicted RBP16.28■□□□□ 0.2
UBAP1-202ENST00000359544 SFMBT2Q5VUG0 894 aa16.28■□□□□ 0.2
UBAP1-202ENST00000359544 CENPPQ6IPU0 288 aa16.28■□□□□ 0.2
UBAP1-202ENST00000359544 BLIDQ8IZY5 108 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms