RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 HOXD10P28358 340 aa15.02■□□□□ -0
CCDC197-201ENST00000359253 ICAM3P32942 547 aa15.02■□□□□ -0
CCDC197-201ENST00000359253 PRMT2P55345 433 aa15.02■□□□□ -0
CCDC197-201ENST00000359253 UBASH3AP57075 661 aa15.02■□□□□ -0
CCDC197-201ENST00000359253 CCNA1P78396 465 aa15.02■□□□□ -0
CCDC197-201ENST00000359253 LACTBP83111 547 aaPredicted RBP15.02■□□□□ -0
CCDC197-201ENST00000359253 EHHADHQ08426 723 aa15.02■□□□□ -0
CCDC197-201ENST00000359253 ZNF746Q6NUN9 644 aaPredicted RBP15.02■□□□□ -0
CCDC197-201ENST00000359253 KCNK18Q7Z418 384 aa15.02■□□□□ -0
CCDC197-201ENST00000359253 GUF1Q8N442 669 aaKnown RBP15.02■□□□□ -0
CCDC197-201ENST00000359253 GPRC5AQ8NFJ5 357 aa15.02■□□□□ -0
CCDC197-201ENST00000359253 IL31RAQ8NI17 732 aa15.02■□□□□ -0
CCDC197-201ENST00000359253 NELFBQ8WX92 580 aa15.02■□□□□ -0
CCDC197-201ENST00000359253 DNAJC19Q96DA6 116 aa15.02■□□□□ -0
CCDC197-201ENST00000359253 UNC45AQ9H3U1 944 aa15.02■□□□□ -0
CCDC197-201ENST00000359253 ZSWIM4Q9H7M6 989 aa15.02■□□□□ -0
CCDC197-201ENST00000359253 RBPJLQ9UBG7 517 aa15.02■□□□□ -0
CCDC197-201ENST00000359253 CPA4Q9UI42 421 aa15.02■□□□□ -0
CCDC197-201ENST00000359253 FRMD3A2A2Y4 597 aa15.01□□□□□ -0.01
CCDC197-201ENST00000359253 POTEFA5A3E0 1075 aa15.01□□□□□ -0.01
CCDC197-201ENST00000359253 LRRC10BA6NIK2 292 aa15.01□□□□□ -0.01
CCDC197-201ENST00000359253 POTEB2H3BUK9 544 aa15.01□□□□□ -0.01
CCDC197-201ENST00000359253 CNMDO75829 334 aa15.01□□□□□ -0.01
CCDC197-201ENST00000359253 KRT18P05783 430 aaKnown RBP15.01□□□□□ -0.01
CCDC197-201ENST00000359253 GSDMDP57764 484 aa15.01□□□□□ -0.01
CCDC197-201ENST00000359253 FILIP1LQ4L180 1135 aa15.01□□□□□ -0.01
CCDC197-201ENST00000359253 CDKAL1Q5VV42 579 aa15.01□□□□□ -0.01
CCDC197-201ENST00000359253 KLHL10Q6JEL2 608 aa15.01□□□□□ -0.01
CCDC197-201ENST00000359253 POTEGQ6S5H5 508 aa15.01□□□□□ -0.01
CCDC197-201ENST00000359253 POTEEQ6S8J3 1075 aa15.01□□□□□ -0.01
CCDC197-201ENST00000359253 ZSCAN30Q86W11 494 aa15.01□□□□□ -0.01
CCDC197-201ENST00000359253 GPBP1Q86WP2 473 aa15.01□□□□□ -0.01
CCDC197-201ENST00000359253 NCAPG2Q86XI2 1143 aa15.01□□□□□ -0.01
CCDC197-201ENST00000359253 SMAP1Q8IYB5 467 aaPredicted RBP15.01□□□□□ -0.01
CCDC197-201ENST00000359253 DYDC2Q96IM9 177 aa15.01□□□□□ -0.01
CCDC197-201ENST00000359253 MOV10L1Q9BXT6 1211 aaKnown RBP15.01□□□□□ -0.01
CCDC197-201ENST00000359253 PANK4Q9NVE7 773 aa15.01□□□□□ -0.01
CCDC197-201ENST00000359253 WDR64B1ANS9 1081 aa15□□□□□ -0.01
CCDC197-201ENST00000359253 SPATA31C2B4DYI2 1134 aa15□□□□□ -0.01
CCDC197-201ENST00000359253 SSBP05455 408 aaKnown RBP eCLIP15□□□□□ -0.01
CCDC197-201ENST00000359253 IDEP14735 1019 aa15□□□□□ -0.01
CCDC197-201ENST00000359253 GAP43P17677 238 aa15□□□□□ -0.01
CCDC197-201ENST00000359253 KCNV1Q6PIU1 500 aa15□□□□□ -0.01
CCDC197-201ENST00000359253 CTU1Q7Z7A3 348 aaKnown RBP15□□□□□ -0.01
CCDC197-201ENST00000359253 FAM114A1Q8IWE2 563 aa15□□□□□ -0.01
CCDC197-201ENST00000359253 TPH2Q8IWU9 490 aa15□□□□□ -0.01
CCDC197-201ENST00000359253 ANKRD13CQ8N6S4 541 aa15□□□□□ -0.01
CCDC197-201ENST00000359253 P2RX5Q93086 422 aa15□□□□□ -0.01
CCDC197-201ENST00000359253 TIPINQ9BVW5 301 aa15□□□□□ -0.01
CCDC197-201ENST00000359253 THAP9Q9H5L6 903 aa15□□□□□ -0.01
CCDC197-201ENST00000359253 IFNKQ9P0W0 207 aa15□□□□□ -0.01
CCDC197-201ENST00000359253 SEL1LQ9UBV2 794 aa15□□□□□ -0.01
CCDC197-201ENST00000359253 DBR1Q9UK59 544 aaKnown RBP15□□□□□ -0.01
CCDC197-201ENST00000359253 CTNND2Q9UQB3 1225 aa15□□□□□ -0.01
CCDC197-201ENST00000359253 GDAQ9Y2T3 454 aa15□□□□□ -0.01
CCDC197-201ENST00000359253 LOXHD1Q8IVV2 1947 aa15□□□□□ -0.01
CCDC197-201ENST00000359253 TGFB3P10600 412 aa14.99□□□□□ -0.01
CCDC197-201ENST00000359253 ERCC3P19447 782 aa14.99□□□□□ -0.01
CCDC197-201ENST00000359253 EDNRBP24530 442 aa14.99□□□□□ -0.01
CCDC197-201ENST00000359253 EEF1GP26641 437 aaKnown RBP14.99□□□□□ -0.01
CCDC197-201ENST00000359253 QARSP47897 775 aaKnown RBP14.99□□□□□ -0.01
CCDC197-201ENST00000359253 ALDH5A1P51649 535 aaPredicted RBP14.99□□□□□ -0.01
CCDC197-201ENST00000359253 LRRC63Q05C16 580 aa14.99□□□□□ -0.01
CCDC197-201ENST00000359253 STK4Q13043 487 aa14.99□□□□□ -0.01
CCDC197-201ENST00000359253 ITGB3BPQ13352 177 aaPredicted RBP14.99□□□□□ -0.01
CCDC197-201ENST00000359253 KCTD2Q14681 263 aa14.99□□□□□ -0.01
CCDC197-201ENST00000359253 FAM26FQ5R3K3 315 aa14.99□□□□□ -0.01
CCDC197-201ENST00000359253 CENPPQ6IPU0 288 aa14.99□□□□□ -0.01
CCDC197-201ENST00000359253 DYMQ7RTS9 669 aa14.99□□□□□ -0.01
CCDC197-201ENST00000359253 C4orf19Q8IY42 314 aa14.99□□□□□ -0.01
CCDC197-201ENST00000359253 SMYD4Q8IYR2 804 aaPredicted RBP14.99□□□□□ -0.01
CCDC197-201ENST00000359253 FAM133AQ8N9E0 248 aa14.99□□□□□ -0.01
CCDC197-201ENST00000359253 MED15Q96RN5 788 aa14.99□□□□□ -0.01
CCDC197-201ENST00000359253 PAGR1Q9BTK6 254 aa14.99□□□□□ -0.01
CCDC197-201ENST00000359253 XPO4Q9C0E2 1151 aaKnown RBP14.99□□□□□ -0.01
CCDC197-201ENST00000359253 EFCC1Q9HA90 598 aa14.99□□□□□ -0.01
CCDC197-201ENST00000359253 RGL1Q9NZL6 768 aa14.99□□□□□ -0.01
CCDC197-201ENST00000359253 ODF2LQ9ULJ1 636 aa14.99□□□□□ -0.01
CCDC197-201ENST00000359253 COL4A3BPQ9Y5P4 624 aa14.99□□□□□ -0.01
CCDC197-201ENST00000359253 ESPNB1AK53 854 aa14.98□□□□□ -0.01
CCDC197-201ENST00000359253 CHMP2AO43633 222 aa14.98□□□□□ -0.01
CCDC197-201ENST00000359253 FCER1AP12319 257 aa14.98□□□□□ -0.01
CCDC197-201ENST00000359253 MSNP26038 577 aaKnown RBP14.98□□□□□ -0.01
CCDC197-201ENST00000359253 MAPK4P31152 587 aa14.98□□□□□ -0.01
CCDC197-201ENST00000359253 PSMC4P43686 418 aa14.98□□□□□ -0.01
CCDC197-201ENST00000359253 FCGRTP55899 365 aa14.98□□□□□ -0.01
CCDC197-201ENST00000359253 PSMC5P62195 406 aa14.98□□□□□ -0.01
CCDC197-201ENST00000359253 ERVK-9P63128 1117 aa14.98□□□□□ -0.01
CCDC197-201ENST00000359253 ERVK-24P63145 666 aa14.98□□□□□ -0.01
CCDC197-201ENST00000359253 CYP4A11Q02928 519 aa14.98□□□□□ -0.01
CCDC197-201ENST00000359253 COASYQ13057 564 aa14.98□□□□□ -0.01
CCDC197-201ENST00000359253 GIT2Q14161 759 aa14.98□□□□□ -0.01
CCDC197-201ENST00000359253 Q3C1V9 767 aa14.98□□□□□ -0.01
CCDC197-201ENST00000359253 ARSHQ5FYA8 562 aa14.98□□□□□ -0.01
CCDC197-201ENST00000359253 TRMT44Q8IYL2 757 aaKnown RBP14.98□□□□□ -0.01
CCDC197-201ENST00000359253 MYOCDQ8IZQ8 938 aa14.98□□□□□ -0.01
CCDC197-201ENST00000359253 ABRAQ8N0Z2 381 aa14.98□□□□□ -0.01
CCDC197-201ENST00000359253 TSG101Q99816 390 aa14.98□□□□□ -0.01
CCDC197-201ENST00000359253 LXNQ9BS40 222 aa14.98□□□□□ -0.01
CCDC197-201ENST00000359253 BHMT2Q9H2M3 363 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms