RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 CCDC124Q96CT7 223 aaKnown RBP19.8■□□□□ 0.76
SHANK1-202ENST00000359082 EMILIN3Q9NT22 766 aa19.8■□□□□ 0.76
SHANK1-202ENST00000359082 PSAPP07602 524 aa19.8■□□□□ 0.76
SHANK1-202ENST00000359082 PMLP29590 882 aa19.8■□□□□ 0.76
SHANK1-202ENST00000359082 USP17L2Q6R6M4 530 aa19.8■□□□□ 0.76
SHANK1-202ENST00000359082 MIGA2Q7L4E1 593 aa19.8■□□□□ 0.76
SHANK1-202ENST00000359082 MAP4K1Q92918 833 aa19.8■□□□□ 0.76
SHANK1-202ENST00000359082 CCDC17Q96LX7 622 aa19.8■□□□□ 0.76
SHANK1-202ENST00000359082 DBNLQ9UJU6 430 aaKnown RBP19.8■□□□□ 0.76
SHANK1-202ENST00000359082 BMP3P12645 472 aa19.8■□□□□ 0.76
SHANK1-202ENST00000359082 ESRRGP62508 458 aa19.8■□□□□ 0.76
SHANK1-202ENST00000359082 NR5A1Q13285 461 aa19.8■□□□□ 0.76
SHANK1-202ENST00000359082 PROSER3Q2NL68 480 aa19.8■□□□□ 0.76
SHANK1-202ENST00000359082 THAP9Q9H5L6 903 aa19.8■□□□□ 0.76
SHANK1-202ENST00000359082 ANTXR1Q9H6X2 564 aa19.8■□□□□ 0.76
SHANK1-202ENST00000359082 PLA2G4BP0C869 781 aa19.8■□□□□ 0.76
SHANK1-202ENST00000359082 BBS9Q3SYG4 887 aa19.8■□□□□ 0.76
SHANK1-202ENST00000359082 GANCQ8TET4 914 aa19.8■□□□□ 0.76
SHANK1-202ENST00000359082 RNF139Q8WU17 664 aa19.8■□□□□ 0.76
SHANK1-202ENST00000359082 TXLNGQ9NUQ3 528 aa19.8■□□□□ 0.76
SHANK1-202ENST00000359082 ATG16L1Q676U5 607 aa19.8■□□□□ 0.76
SHANK1-202ENST00000359082 CEP19Q96LK0 163 aa19.8■□□□□ 0.76
SHANK1-202ENST00000359082 RPF1Q9H9Y2 349 aaKnown RBP19.8■□□□□ 0.76
SHANK1-202ENST00000359082 POLR3EQ9NVU0 708 aa19.8■□□□□ 0.76
SHANK1-202ENST00000359082 CCHCR1Q8TD31 782 aa19.79■□□□□ 0.76
SHANK1-202ENST00000359082 KLHL29Q96CT2 875 aa19.79■□□□□ 0.76
SHANK1-202ENST00000359082 FAM81BQ96LP2 452 aa19.79■□□□□ 0.76
SHANK1-202ENST00000359082 HOXA13P31271 388 aaPredicted RBP19.79■□□□□ 0.76
SHANK1-202ENST00000359082 UNC5CLQ8IV45 518 aa19.79■□□□□ 0.76
SHANK1-202ENST00000359082 EFCAB13Q8IY85 973 aa19.79■□□□□ 0.76
SHANK1-202ENST00000359082 LEMD3Q9Y2U8 911 aa19.79■□□□□ 0.76
SHANK1-202ENST00000359082 PLCG1P19174 1290 aa19.79■□□□□ 0.76
SHANK1-202ENST00000359082 TAF11Q15544 211 aa19.79■□□□□ 0.76
SHANK1-202ENST00000359082 RNF207Q6ZRF8 634 aa19.79■□□□□ 0.76
SHANK1-202ENST00000359082 WDR64B1ANS9 1081 aa19.79■□□□□ 0.76
SHANK1-202ENST00000359082 HMGB1P1B2RPK0 211 aaPredicted RBP19.79■□□□□ 0.76
SHANK1-202ENST00000359082 ADD2P35612 726 aa19.79■□□□□ 0.76
SHANK1-202ENST00000359082 HDLBPQ00341 1268 aaKnown RBP19.79■□□□□ 0.76
SHANK1-202ENST00000359082 EXOC8Q8IYI6 725 aa19.79■□□□□ 0.76
SHANK1-202ENST00000359082 PACSIN2Q9UNF0 486 aaPredicted RBP19.79■□□□□ 0.76
SHANK1-202ENST00000359082 DMTNQ08495 405 aa19.79■□□□□ 0.76
SHANK1-202ENST00000359082 TTC30AQ86WT1 665 aa19.79■□□□□ 0.76
SHANK1-202ENST00000359082 THOC1Q96FV9 657 aaKnown RBP19.79■□□□□ 0.76
SHANK1-202ENST00000359082 ZMYND12Q9H0C1 365 aa19.79■□□□□ 0.76
SHANK1-202ENST00000359082 USP17L8P0C7I0 530 aa19.78■□□□□ 0.76
SHANK1-202ENST00000359082 EEF1DP29692 281 aaKnown RBP19.78■□□□□ 0.76
SHANK1-202ENST00000359082 KRT80Q6KB66 452 aa19.78■□□□□ 0.76
SHANK1-202ENST00000359082 FAF2Q96CS3 445 aa19.78■□□□□ 0.76
SHANK1-202ENST00000359082 TRAIPQ9BWF2 469 aa19.78■□□□□ 0.76
SHANK1-202ENST00000359082 PARVGQ9HBI0 331 aa19.78■□□□□ 0.76
SHANK1-202ENST00000359082 KIF23Q02241 960 aaPredicted RBP19.78■□□□□ 0.76
SHANK1-202ENST00000359082 TMED1Q13445 227 aa19.78■□□□□ 0.76
SHANK1-202ENST00000359082 PAGE5Q96GU1 130 aa19.78■□□□□ 0.76
SHANK1-202ENST00000359082 MSTO1Q9BUK6 570 aa19.78■□□□□ 0.76
SHANK1-202ENST00000359082 SLC13A4Q9UKG4 626 aa19.78■□□□□ 0.76
SHANK1-202ENST00000359082 ZBED1O96006 694 aa19.78■□□□□ 0.76
SHANK1-202ENST00000359082 ARHGDIAP52565 204 aa19.78■□□□□ 0.76
SHANK1-202ENST00000359082 KLC3Q6P597 504 aa19.78■□□□□ 0.76
SHANK1-202ENST00000359082 DSTYKQ6XUX3 929 aa19.78■□□□□ 0.76
SHANK1-202ENST00000359082 LOC102724428A0A0B4J2F2 783 aa19.78■□□□□ 0.76
SHANK1-202ENST00000359082 RASGRF2O14827 1237 aa19.78■□□□□ 0.76
SHANK1-202ENST00000359082 CYP21A2P08686 494 aa19.78■□□□□ 0.76
SHANK1-202ENST00000359082 NPR1P16066 1061 aa19.78■□□□□ 0.76
SHANK1-202ENST00000359082 SIK1P57059 783 aa19.78■□□□□ 0.76
SHANK1-202ENST00000359082 NOP14P78316 857 aaKnown RBP19.78■□□□□ 0.76
SHANK1-202ENST00000359082 KRT27Q7Z3Y8 459 aa19.78■□□□□ 0.76
SHANK1-202ENST00000359082 MTRQ99707 1265 aa19.78■□□□□ 0.76
SHANK1-202ENST00000359082 PRKAG2Q9UGJ0 569 aa19.78■□□□□ 0.76
SHANK1-202ENST00000359082 ANGPTL2Q9UKU9 493 aa19.78■□□□□ 0.76
SHANK1-202ENST00000359082 SH2B2O14492 632 aaPredicted RBP19.77■□□□□ 0.76
SHANK1-202ENST00000359082 IKBKBO14920 756 aa19.77■□□□□ 0.76
SHANK1-202ENST00000359082 MYL3P08590 195 aa19.77■□□□□ 0.76
SHANK1-202ENST00000359082 HSPA8P11142 646 aaKnown RBP19.77■□□□□ 0.76
SHANK1-202ENST00000359082 GCFC2P16383 781 aaKnown RBP19.77■□□□□ 0.76
SHANK1-202ENST00000359082 PSMA2P25787 234 aa19.77■□□□□ 0.76
SHANK1-202ENST00000359082 OCRLQ01968 901 aa19.77■□□□□ 0.76
SHANK1-202ENST00000359082 PYROXD1Q8WU10 500 aa19.77■□□□□ 0.76
SHANK1-202ENST00000359082 CNOT10Q9H9A5 744 aaKnown RBP19.77■□□□□ 0.76
SHANK1-202ENST00000359082 CYP2D7A0A087X1C5 515 aa19.77■□□□□ 0.76
SHANK1-202ENST00000359082 IQANK1A0A1B0GTG1 560 aa19.77■□□□□ 0.76
SHANK1-202ENST00000359082 CDC37Q16543 378 aaPredicted RBP19.77■□□□□ 0.76
SHANK1-202ENST00000359082 PPP1R2P3Q6NXS1 205 aa19.77■□□□□ 0.76
SHANK1-202ENST00000359082 NLRP4Q96MN2 994 aa19.77■□□□□ 0.76
SHANK1-202ENST00000359082 CYTH2Q99418 400 aa19.77■□□□□ 0.76
SHANK1-202ENST00000359082 SFI1A8K8P3 1242 aa19.77■□□□□ 0.75
SHANK1-202ENST00000359082 FKBP3Q00688 224 aaKnown RBP19.77■□□□□ 0.75
SHANK1-202ENST00000359082 GCNAQ96QF7 691 aa19.77■□□□□ 0.75
SHANK1-202ENST00000359082 PUS7LQ9H0K6 701 aaKnown RBP19.77■□□□□ 0.75
SHANK1-202ENST00000359082 ASAP1Q9ULH1 1129 aa19.77■□□□□ 0.75
SHANK1-202ENST00000359082 ACSL3O95573 720 aa19.76■□□□□ 0.75
SHANK1-202ENST00000359082 TMEM259Q4ZIN3 620 aa19.76■□□□□ 0.75
SHANK1-202ENST00000359082 PCDHB6Q9Y5E3 794 aa19.76■□□□□ 0.75
SHANK1-202ENST00000359082 USP17L3A6NCW0 530 aa19.76■□□□□ 0.75
SHANK1-202ENST00000359082 USP17L4A6NCW7 530 aa19.76■□□□□ 0.75
SHANK1-202ENST00000359082 H3BRJ5 948 aa19.76■□□□□ 0.75
SHANK1-202ENST00000359082 CHEK2O96017 543 aa19.76■□□□□ 0.75
SHANK1-202ENST00000359082 USP17L1Q7RTZ2 530 aa19.76■□□□□ 0.75
SHANK1-202ENST00000359082 TRIM59Q8IWR1 403 aa19.76■□□□□ 0.75
SHANK1-202ENST00000359082 MXI1P50539 228 aa19.76■□□□□ 0.75
SHANK1-202ENST00000359082 ARL13BQ3SXY8 428 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms