RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 GPR101Q96P66 508 aaPredicted RBP10.5□□□□□ -0.73
CHD3-202ENST00000358181 KIAA1468Q9P260 1216 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 ZBTB7BO15156 539 aaPredicted RBP10.5□□□□□ -0.73
CHD3-202ENST00000358181 CLTAP09496 248 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 MEI1Q5TIA1 1274 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 PDXDC1Q6P996 788 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 BTN2A1Q7KYR7 527 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 MAP7D3Q8IWC1 876 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 RASEFQ8IZ41 740 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 MAML1Q92585 1016 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 CYTH2Q99418 400 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 EXO5Q9H790 373 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 WARS2Q9UGM6 360 aaKnown RBP10.5□□□□□ -0.73
CHD3-202ENST00000358181 KIF21AQ7Z4S6 1674 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 PRAMEF22A3QJZ6 481 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 DEXIO95424 95 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 FAM178BQ8IXR5 827 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 PPP1R36Q96LQ0 422 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 N6AMT1Q9Y5N5 214 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 GOLGA8QA0A0J9YX86 632 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 GOLGA8OA6NCC3 632 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 GOLGA8NF8WBI6 632 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 TEX28O15482 410 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 MYO1EQ12965 1108 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 KLHL40Q2TBA0 621 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 SNX14Q9Y5W7 946 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 GDF11O95390 407 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 KCTD1Q719H9 257 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 SH3BP5LQ7L8J4 393 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 NUP58Q9BVL2 599 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 KMT5AQ9NQR1 393 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 TTC41PQ6P2S7 1318 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 MCF2LO15068 1137 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 RAD17O75943 681 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 KRT14P02533 472 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 FOXR1Q6PIV2 292 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 MMS22LQ6ZRQ5 1243 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 EXD1Q8NHP7 514 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 TRPV6Q9H1D0 765 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 CCDC195A0A1B0GUA6 201 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 HSPA6P17066 643 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 SOX11P35716 441 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 PSMC5P62195 406 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 ESRRGP62508 458 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 DMC1Q14565 340 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 USE1Q9NZ43 259 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 CNOT7Q9UIV1 285 aaKnown RBP10.49□□□□□ -0.73
CHD3-202ENST00000358181 UGGT2Q9NYU1 1516 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 KRT8P05787 483 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 PAK2Q13177 524 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 KRT72Q14CN4 511 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 KRT25Q7Z3Z0 450 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 OPTNQ96CV9 577 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 MIS12Q9H081 205 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 KLC2Q9H0B6 622 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 POLR2FP61218 127 aaKnown RBP10.49□□□□□ -0.73
CHD3-202ENST00000358181 NME3Q13232 169 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 MTMR3Q13615 1198 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 ZKSCAN8Q15776 578 aaPredicted RBP10.49□□□□□ -0.73
CHD3-202ENST00000358181 ARL13BQ3SXY8 428 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 IRAK1BP1Q5VVH5 260 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 C16orf87Q6PH81 154 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 FGD2Q7Z6J4 655 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 SCG3Q8WXD2 468 aaKnown RBP10.49□□□□□ -0.73
CHD3-202ENST00000358181 EEF2KMTQ96G04 330 aa10.49□□□□□ -0.73
CHD3-202ENST00000358181 MAPKBP1O60336 1514 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 EFCAB8A8MWE9 144 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 DDX5P17844 614 aaKnown RBP10.48□□□□□ -0.73
CHD3-202ENST00000358181 IFNAR2P48551 515 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 CACNB1Q02641 598 aaPredicted RBP10.48□□□□□ -0.73
CHD3-202ENST00000358181 LRRC24Q50LG9 513 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 MIIPQ5JXC2 388 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 GPKOWQ92917 476 aaPredicted RBP eCLIP10.48□□□□□ -0.73
CHD3-202ENST00000358181 SPON2Q9BUD6 331 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 CAB39Q9Y376 341 aaPredicted RBP10.48□□□□□ -0.73
CHD3-202ENST00000358181 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.48□□□□□ -0.73
CHD3-202ENST00000358181 HSPA8P11142 646 aaKnown RBP10.48□□□□□ -0.73
CHD3-202ENST00000358181 DARSP14868 501 aaKnown RBP10.48□□□□□ -0.73
CHD3-202ENST00000358181 ATXN3P54252 364 aaPredicted RBP10.48□□□□□ -0.73
CHD3-202ENST00000358181 GJC2Q5T442 439 aaPredicted RBP10.48□□□□□ -0.73
CHD3-202ENST00000358181 CYP4F22Q6NT55 531 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 THOC1Q96FV9 657 aaKnown RBP10.48□□□□□ -0.73
CHD3-202ENST00000358181 TESK2Q96S53 571 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 ZNF577Q9BSK1 485 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 FGFR1OP2Q9NVK5 253 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 POU5F1BQ06416 359 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 PASD1Q8IV76 773 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 POMGNT2Q8NAT1 580 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 TRIM15Q9C019 465 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 RPAP3Q9H6T3 665 aaPredicted RBP10.48□□□□□ -0.73
CHD3-202ENST00000358181 MAN1A2O60476 641 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 ANKS6Q68DC2 871 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 COA7Q96BR5 231 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 PALMDQ9NP74 551 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 SEL1LQ9UBV2 794 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 HMBSP08397 361 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 MSH2P43246 934 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 TWF2Q6IBS0 349 aaKnown RBP10.48□□□□□ -0.73
CHD3-202ENST00000358181 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.48□□□□□ -0.73
CHD3-202ENST00000358181 OTUB1Q96FW1 271 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms