RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 PHACTR2O75167 634 aa10.2□□□□□ -0.78
UPF2-202ENST00000357604 FKBP15Q5T1M5 1219 aa10.2□□□□□ -0.78
UPF2-202ENST00000357604 ANO10Q9NW15 660 aa10.2□□□□□ -0.78
UPF2-202ENST00000357604 DUSP28Q4G0W2 176 aa10.2□□□□□ -0.78
UPF2-202ENST00000357604 PSPC1Q8WXF1 523 aaKnown RBP10.2□□□□□ -0.78
UPF2-202ENST00000357604 COL1A2P08123 1366 aa10.2□□□□□ -0.78
UPF2-202ENST00000357604 PSMA7O14818 248 aa10.2□□□□□ -0.78
UPF2-202ENST00000357604 OATP04181 439 aa10.2□□□□□ -0.78
UPF2-202ENST00000357604 HTRA3P83110 453 aa10.2□□□□□ -0.78
UPF2-202ENST00000357604 CCDC144BQ3MJ40 725 aa10.2□□□□□ -0.78
UPF2-202ENST00000357604 PPTC7Q8NI37 304 aa10.2□□□□□ -0.78
UPF2-202ENST00000357604 KIAA1024Q9UPX6 916 aa10.2□□□□□ -0.78
UPF2-202ENST00000357604 GPR182O15218 404 aa10.2□□□□□ -0.78
UPF2-202ENST00000357604 AMHP03971 560 aa10.2□□□□□ -0.78
UPF2-202ENST00000357604 SURF1Q15526 300 aa10.2□□□□□ -0.78
UPF2-202ENST00000357604 CEP89Q96ST8 783 aa10.2□□□□□ -0.78
UPF2-202ENST00000357604 PORCNQ9H237 461 aa10.2□□□□□ -0.78
UPF2-202ENST00000357604 MRPL44Q9H9J2 332 aaKnown RBP10.2□□□□□ -0.78
UPF2-202ENST00000357604 KMT5AQ9NQR1 393 aa10.2□□□□□ -0.78
UPF2-202ENST00000357604 AAASQ9NRG9 546 aa10.2□□□□□ -0.78
UPF2-202ENST00000357604 LRRIQ4A6NIV6 560 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 K7ENM7 598 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 P4HA1P13674 534 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 PAK2Q13177 524 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 CCDC40Q4G0X9 1142 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 TAF2Q6P1X5 1199 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 MCOLN1Q9GZU1 580 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 TMEM206Q9H813 350 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 ANKEF1Q9NU02 776 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 KCNH3Q9ULD8 1083 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 LTBP1Q14766 1721 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 EMSYQ7Z589 1322 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 USO1O60763 962 aaKnown RBP10.19□□□□□ -0.78
UPF2-202ENST00000357604 PPIGQ13427 754 aaKnown RBP eCLIP10.19□□□□□ -0.781e-6■■■■□ 24.4
UPF2-202ENST00000357604 NME8Q8N427 588 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 PDILTQ8N807 584 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 FAM49AQ9H0Q0 323 aaPredicted RBP10.19□□□□□ -0.78
UPF2-202ENST00000357604 TSPYL2Q9H2G4 693 aaPredicted RBP10.19□□□□□ -0.78
UPF2-202ENST00000357604 SENP2Q9HC62 589 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 SRGAP2BP0DMP2 458 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 ADCYAP1R1P41586 468 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 EFNA5P52803 228 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 ACTR2P61160 394 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 ZNF792Q3KQV3 632 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 MORN1Q5T089 497 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 CCDC183Q5T5S1 534 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 SLFN12LQ6IEE8 588 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 CAGE1Q8TC20 777 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 DYDC2Q96IM9 177 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 ACCSQ96QU6 501 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 FNBP1Q96RU3 617 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 IL25Q9H293 177 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 DNM1LO00429 736 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 DNM1Q05193 864 aaKnown RBP10.19□□□□□ -0.78
UPF2-202ENST00000357604 TXLNBQ8N3L3 684 aa10.19□□□□□ -0.78
UPF2-202ENST00000357604 BRCA1P38398 1863 aaKnown RBP10.18□□□□□ -0.78
UPF2-202ENST00000357604 EPB41P11171 864 aaKnown RBP10.18□□□□□ -0.78
UPF2-202ENST00000357604 CYP2C9P11712 490 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 RAG1P15918 1043 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 RFC2P35250 354 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 AFMP43652 599 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 PTGISQ16647 500 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 CATSPER4Q7RTX7 472 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 LARP4BQ92615 738 aaKnown RBP10.18□□□□□ -0.78
UPF2-202ENST00000357604 LXNQ9BS40 222 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 N4BP3O15049 544 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 XRCC6P12956 609 aaKnown RBP eCLIP10.18□□□□□ -0.783e-6■□□□□ 11
UPF2-202ENST00000357604 ICAM3P32942 547 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 CNTN2Q02246 1040 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 Q3C1V9 767 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 POTEDQ86YR6 584 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 BANK1Q8NDB2 785 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 EIF2AK1Q9BQI3 630 aaKnown RBP10.18□□□□□ -0.78
UPF2-202ENST00000357604 DACT1Q9NYF0 836 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 FOXN1O15353 648 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 DGAT1O75907 488 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 YWHABP31946 246 aaKnown RBP10.18□□□□□ -0.78
UPF2-202ENST00000357604 CTTNQ14247 550 aaKnown RBP10.18□□□□□ -0.78
UPF2-202ENST00000357604 FMNL3Q8IVF7 1028 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 SRPRBQ9Y5M8 271 aaKnown RBP10.18□□□□□ -0.78
UPF2-202ENST00000357604 ADGRA2Q96PE1 1338 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 GJB1P08034 283 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 YWHAEP62258 255 aaKnown RBP10.18□□□□□ -0.78
UPF2-202ENST00000357604 SLC39A14Q15043 492 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 VSIG10LQ86VR7 867 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 SH3TC2Q8TF17 1288 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 AFG1LQ8WV93 481 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 APBB2Q92870 758 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 IL17RAQ96F46 866 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 POLR3CQ9BUI4 534 aaPredicted RBP10.18□□□□□ -0.78
UPF2-202ENST00000357604 PANK4Q9NVE7 773 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 UBIAD1Q9Y5Z9 338 aa10.18□□□□□ -0.78
UPF2-202ENST00000357604 SPATA31C2B4DYI2 1134 aa10.17□□□□□ -0.78
UPF2-202ENST00000357604 RNASELQ05823 741 aaKnown RBP10.17□□□□□ -0.78
UPF2-202ENST00000357604 PDCL3Q9H2J4 239 aa10.17□□□□□ -0.78
UPF2-202ENST00000357604 CAND2O75155 1236 aa10.17□□□□□ -0.78
UPF2-202ENST00000357604 GCNT3O95395 438 aa10.17□□□□□ -0.78
UPF2-202ENST00000357604 FAM160A1Q05DH4 1040 aa10.17□□□□□ -0.78
UPF2-202ENST00000357604 NR5A1Q13285 461 aa10.17□□□□□ -0.78
UPF2-202ENST00000357604 GJC2Q5T442 439 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms