RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 BLOC1S4Q9NUP1 217 aa9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 UBR2Q8IWV8 1755 aa9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 SLIT2O94813 1529 aa9□□□□□ -0.97
CDC42SE1-201ENST00000357235 BUB1BO60566 1050 aaPredicted RBP9□□□□□ -0.97
CDC42SE1-201ENST00000357235 PYGLP06737 847 aa9□□□□□ -0.97
CDC42SE1-201ENST00000357235 ACTN1P12814 892 aa9□□□□□ -0.97
CDC42SE1-201ENST00000357235 KCNMA1Q12791 1236 aa9□□□□□ -0.97
CDC42SE1-201ENST00000357235 PRPF4BQ13523 1007 aaKnown RBP9□□□□□ -0.97
CDC42SE1-201ENST00000357235 SLC30A9Q6PML9 568 aa9□□□□□ -0.97
CDC42SE1-201ENST00000357235 ADAT2Q7Z6V5 191 aaKnown RBP9□□□□□ -0.97
CDC42SE1-201ENST00000357235 ZNF473Q8WTR7 871 aaKnown RBP9□□□□□ -0.97
CDC42SE1-201ENST00000357235 NSMCE1Q8WV22 266 aa9□□□□□ -0.97
CDC42SE1-201ENST00000357235 PSMD1Q99460 953 aa9□□□□□ -0.97
CDC42SE1-201ENST00000357235 ZMYND12Q9H0C1 365 aa9□□□□□ -0.97
CDC42SE1-201ENST00000357235 DDX47Q9H0S4 455 aaKnown RBP9□□□□□ -0.97
CDC42SE1-201ENST00000357235 EPN3Q9H201 632 aa9□□□□□ -0.97
CDC42SE1-201ENST00000357235 MAGEF1Q9HAY2 307 aa9□□□□□ -0.97
CDC42SE1-201ENST00000357235 GPCPD1Q9NPB8 672 aa9□□□□□ -0.97
CDC42SE1-201ENST00000357235 NPHP3-ACAD11A0A0J9YXS1 232 aa9□□□□□ -0.97
CDC42SE1-201ENST00000357235 GCOM1H8Y6P7 765 aaPredicted RBP9□□□□□ -0.97
CDC42SE1-201ENST00000357235 TLR2O60603 784 aa9□□□□□ -0.97
CDC42SE1-201ENST00000357235 MYZAPP0CAP1 466 aa9□□□□□ -0.97
CDC42SE1-201ENST00000357235 PPP1R2P41236 205 aa9□□□□□ -0.97
CDC42SE1-201ENST00000357235 TNNC1P63316 161 aa9□□□□□ -0.97
CDC42SE1-201ENST00000357235 RPS6KA1Q15418 735 aa9□□□□□ -0.97
CDC42SE1-201ENST00000357235 UBE2SQ16763 222 aa9□□□□□ -0.97
CDC42SE1-201ENST00000357235 HERC4Q5GLZ8 1057 aaPredicted RBP9□□□□□ -0.97
CDC42SE1-201ENST00000357235 C1QTNF12Q5T7M4 302 aa9□□□□□ -0.97
CDC42SE1-201ENST00000357235 MEX3CQ5U5Q3 659 aaKnown RBP9□□□□□ -0.97
CDC42SE1-201ENST00000357235 BZW1Q7L1Q6 419 aaKnown RBP9□□□□□ -0.97
CDC42SE1-201ENST00000357235 CLEC10AQ8IUN9 316 aa9□□□□□ -0.97
CDC42SE1-201ENST00000357235 IQCKQ8N0W5 287 aa9□□□□□ -0.97
CDC42SE1-201ENST00000357235 LRRC47Q8N1G4 583 aaKnown RBP9□□□□□ -0.97
CDC42SE1-201ENST00000357235 CAVIN3Q969G5 261 aa9□□□□□ -0.97
CDC42SE1-201ENST00000357235 TBC1D31Q96DN5 1066 aa9□□□□□ -0.97
CDC42SE1-201ENST00000357235 FGFBP2Q9BYJ0 223 aa9□□□□□ -0.97
CDC42SE1-201ENST00000357235 HAUS2Q9NVX0 235 aa9□□□□□ -0.97
CDC42SE1-201ENST00000357235 COL4A3BPQ9Y5P4 624 aa9□□□□□ -0.97
CDC42SE1-201ENST00000357235 MYH3P11055 1940 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 SMIM23A6NLE4 172 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 USP17L5A8MUK1 530 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 SERPING1P05155 500 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 HNRNPH3P31942 346 aaKnown RBP8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 FKBP3Q00688 224 aaKnown RBP8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 LAMB3Q13751 1172 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 GRIK5Q16478 980 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 ACCSLQ4AC99 568 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 DCAF17Q5H9S7 520 aaPredicted RBP8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 HGSNATQ68CP4 663 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 GALNT17Q6IS24 598 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 MIS18BP1Q6P0N0 1132 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 FBXO33Q7Z6M2 555 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 ANKRD23Q86SG2 305 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 NLRP14Q86W24 1093 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 GUF1Q8N442 669 aaKnown RBP8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 ATP6V1G3Q96LB4 118 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 NLRP3Q96P20 1036 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 RAB34Q9BZG1 259 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 DPH5Q9H2P9 285 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 GOPCQ9HD26 462 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 BMP2KQ9NSY1 1161 aaPredicted RBP8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 PANK4Q9NVE7 773 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 TRPC6Q9Y210 931 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 PARP4Q9UKK3 1724 aaKnown RBP8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 CICQ96RK0 1608 aaPredicted RBP8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 AHCYL1O43865 530 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 EPB41P11171 864 aaKnown RBP8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 MDH1P40925 334 aaKnown RBP8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 LRRC63Q05C16 580 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 ITIH3Q06033 890 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 MYO1EQ12965 1108 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 ASIC2Q16515 512 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 PTGISQ16647 500 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 FAM26FQ5R3K3 315 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 SPTY2D1Q68D10 685 aaPredicted RBP8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 LRRC55Q6ZSA7 311 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 MYCBPAPQ8TBZ2 947 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 PNMA5Q96PV4 448 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 TSKSQ9UJT2 592 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 GGA2Q9UJY4 613 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 PALM3A6NDB9 673 aaPredicted RBP8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 E9PMD0 336 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 BAG3O95817 575 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 FESP07332 822 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 COASYQ13057 564 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 SBK1Q52WX2 424 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 GLE1Q53GS7 698 aaKnown RBP8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 RNF10Q8N5U6 811 aaKnown RBP8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 EZH1Q92800 747 aaPredicted RBP8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 CEP95Q96GE4 821 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 GDF3Q9NR23 364 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 AMACRQ9UHK6 382 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 ATP6V0A2Q9Y487 856 aa8.99□□□□□ -0.97
CDC42SE1-201ENST00000357235 KCNQ2O43526 872 aa8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 ADAM9Q13443 819 aa8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 PICALMQ13492 652 aa8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 DDB1Q16531 1140 aa8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 SLC18A3Q16572 532 aa8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 KDM7AQ6ZMT4 941 aa8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 RAD54LQ92698 747 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms