RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 PIGOQ8TEQ8 1089 aa20.26■□□□□ 0.83
SMARCD3-202ENST00000356800 ANP32BQ92688 251 aaKnown RBP20.26■□□□□ 0.83
SMARCD3-202ENST00000356800 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.26■□□□□ 0.83
SMARCD3-202ENST00000356800 GJD2Q9UKL4 321 aa20.26■□□□□ 0.83
SMARCD3-202ENST00000356800 MYH9P35579 1960 aaKnown RBP20.26■□□□□ 0.83
SMARCD3-202ENST00000356800 FARP2O94887 1054 aaPredicted RBP20.26■□□□□ 0.83
SMARCD3-202ENST00000356800 EYA4O95677 639 aa20.26■□□□□ 0.83
SMARCD3-202ENST00000356800 SSBP05455 408 aaKnown RBP eCLIP20.26■□□□□ 0.83
SMARCD3-202ENST00000356800 SP4Q02446 784 aa20.26■□□□□ 0.83
SMARCD3-202ENST00000356800 IQCB1Q15051 598 aa20.26■□□□□ 0.83
SMARCD3-202ENST00000356800 TMEM63BQ5T3F8 832 aa20.26■□□□□ 0.83
SMARCD3-202ENST00000356800 TAPT1Q6NXT6 567 aa20.26■□□□□ 0.83
SMARCD3-202ENST00000356800 SMAP1Q8IYB5 467 aaPredicted RBP20.26■□□□□ 0.83
SMARCD3-202ENST00000356800 TCEAL9Q9UHQ7 104 aa20.26■□□□□ 0.83
SMARCD3-202ENST00000356800 PCDHA10Q9Y5I2 948 aa20.26■□□□□ 0.83
SMARCD3-202ENST00000356800 THSD7BQ9C0I4 1608 aa20.25■□□□□ 0.83
SMARCD3-202ENST00000356800 HOXC6P09630 235 aa20.25■□□□□ 0.83
SMARCD3-202ENST00000356800 CYP11B2P19099 503 aa20.25■□□□□ 0.83
SMARCD3-202ENST00000356800 QARSP47897 775 aaKnown RBP20.25■□□□□ 0.83
SMARCD3-202ENST00000356800 ASIC1P78348 528 aa20.25■□□□□ 0.83
SMARCD3-202ENST00000356800 KMT5BQ4FZB7 885 aa20.25■□□□□ 0.83
SMARCD3-202ENST00000356800 ARSHQ5FYA8 562 aa20.25■□□□□ 0.83
SMARCD3-202ENST00000356800 KCNV1Q6PIU1 500 aa20.25■□□□□ 0.83
SMARCD3-202ENST00000356800 ABHD15Q6UXT9 468 aa20.25■□□□□ 0.83
SMARCD3-202ENST00000356800 DYMQ7RTS9 669 aa20.25■□□□□ 0.83
SMARCD3-202ENST00000356800 LUZP1Q86V48 1076 aa20.25■□□□□ 0.83
SMARCD3-202ENST00000356800 SYT2Q8N9I0 419 aaPredicted RBP20.25■□□□□ 0.83
SMARCD3-202ENST00000356800 DDX12PQ92771 950 aa20.25■□□□□ 0.83
SMARCD3-202ENST00000356800 DNAJC19Q96DA6 116 aa20.25■□□□□ 0.83
SMARCD3-202ENST00000356800 TINF2Q9BSI4 451 aa20.25■□□□□ 0.83
SMARCD3-202ENST00000356800 ARHGAP39Q9C0H5 1083 aa20.25■□□□□ 0.83
SMARCD3-202ENST00000356800 BHMT2Q9H2M3 363 aa20.25■□□□□ 0.83
SMARCD3-202ENST00000356800 ZSWIM4Q9H7M6 989 aa20.25■□□□□ 0.83
SMARCD3-202ENST00000356800 TNPO2O14787 897 aaKnown RBP20.24■□□□□ 0.83
SMARCD3-202ENST00000356800 LYPLA2O95372 231 aa20.24■□□□□ 0.83
SMARCD3-202ENST00000356800 GGPS1O95749 300 aa20.24■□□□□ 0.83
SMARCD3-202ENST00000356800 TBC1D8O95759 1140 aa20.24■□□□□ 0.83
SMARCD3-202ENST00000356800 NEDD9Q14511 834 aa20.24■□□□□ 0.83
SMARCD3-202ENST00000356800 GPBP1Q86WP2 473 aa20.24■□□□□ 0.83
SMARCD3-202ENST00000356800 GIMAP8Q8ND71 665 aaPredicted RBP20.24■□□□□ 0.83
SMARCD3-202ENST00000356800 NACC1Q96RE7 527 aa20.24■□□□□ 0.83
SMARCD3-202ENST00000356800 VTA1Q9NP79 307 aa20.24■□□□□ 0.83
SMARCD3-202ENST00000356800 FLRT1Q9NZU1 646 aa20.24■□□□□ 0.83
SMARCD3-202ENST00000356800 SYNGAP1Q96PV0 1343 aa20.24■□□□□ 0.83
SMARCD3-202ENST00000356800 RBM47A0AV96 593 aaKnown RBP20.23■□□□□ 0.83
SMARCD3-202ENST00000356800 ATG7O95352 703 aa20.23■□□□□ 0.83
SMARCD3-202ENST00000356800 MAP2K2P36507 400 aa20.23■□□□□ 0.83
SMARCD3-202ENST00000356800 KCNB1Q14721 858 aa20.23■□□□□ 0.83
SMARCD3-202ENST00000356800 LRRC27Q9C0I9 530 aa20.23■□□□□ 0.83
SMARCD3-202ENST00000356800 SLC5A4Q9NY91 659 aa20.23■□□□□ 0.83
SMARCD3-202ENST00000356800 NPHP3-ACAD11A0A0J9YXS1 232 aa20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 RHOBTB3O94955 611 aa20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 PSAPP07602 524 aa20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 SUPT20HL2P0C7V6 817 aa20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 PTGS1P23219 599 aa20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 PSMC5P62195 406 aa20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 LACTBP83111 547 aaPredicted RBP20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 CAP1Q01518 475 aa20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 CELF3Q5SZQ8 465 aaKnown RBP20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 METTL7BQ6UX53 244 aa20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 CCDC60Q8IWA6 550 aaPredicted RBP20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 SMYD4Q8IYR2 804 aaPredicted RBP20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 MLKLQ8NB16 471 aa20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 SCFD2Q8WU76 684 aa20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 COPS5Q92905 334 aa20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 TRIM47Q96LD4 638 aa20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 RUSC1Q9BVN2 902 aa20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 CFHR5Q9BXR6 569 aa20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 RMND1Q9NWS8 449 aa20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 ARID2Q68CP9 1835 aa20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 GSTTP1A0A1W2PQM5 241 aa20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 ZNF862O60290 1169 aa20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 TXNP10599 105 aaKnown RBP20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 TTLL4Q14679 1199 aa20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 CCL14Q16627 93 aa20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 CT47A1Q5JQC4 288 aaPredicted RBP20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 SWSAP1Q6NVH7 229 aa20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 DHX40Q8IX18 779 aaKnown RBP20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 C4orf19Q8IY42 314 aa20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 MSL3Q8N5Y2 521 aaKnown RBP20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 SOCS4Q8WXH5 440 aa20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 RNF186Q9NXI6 227 aa20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 GABBR1Q9UBS5 961 aa20.22■□□□□ 0.83
SMARCD3-202ENST00000356800 PVALEFA0A1B0GWK0 134 aa20.21■□□□□ 0.83
SMARCD3-202ENST00000356800 STBD1O95210 358 aa20.21■□□□□ 0.83
SMARCD3-202ENST00000356800 IGHA2P01877 340 aa20.21■□□□□ 0.83
SMARCD3-202ENST00000356800 CD44P16070 742 aaKnown RBP20.21■□□□□ 0.83
SMARCD3-202ENST00000356800 CYP2B6P20813 491 aa20.21■□□□□ 0.83
SMARCD3-202ENST00000356800 RGS2P41220 211 aa20.21■□□□□ 0.83
SMARCD3-202ENST00000356800 PSMC4P43686 418 aa20.21■□□□□ 0.83
SMARCD3-202ENST00000356800 ZNF658Q5TYW1 1059 aaPredicted RBP20.21■□□□□ 0.83
SMARCD3-202ENST00000356800 MIS18BP1Q6P0N0 1132 aa20.21■□□□□ 0.83
SMARCD3-202ENST00000356800 UNC13DQ70J99 1090 aa20.21■□□□□ 0.83
SMARCD3-202ENST00000356800 DACH1Q9UI36 760 aa20.21■□□□□ 0.83
SMARCD3-202ENST00000356800 GDAQ9Y2T3 454 aa20.21■□□□□ 0.83
SMARCD3-202ENST00000356800 IGKV6D-21A0A0A0MT36 114 aa20.2■□□□□ 0.82
SMARCD3-202ENST00000356800 TMEM150BA6NC51 233 aa20.2■□□□□ 0.82
SMARCD3-202ENST00000356800 TRPA1O75762 1119 aa20.2■□□□□ 0.82
SMARCD3-202ENST00000356800 FCGRTP55899 365 aa20.2■□□□□ 0.82
SMARCD3-202ENST00000356800 EHHADHQ08426 723 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms