RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 CAV1Q03135 178 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 FSCBQ5H9T9 825 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 KIAA1755Q5JYT7 1200 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 HP1BP3Q5SSJ5 553 aaPredicted RBP6.95□□□□□ -1.3
UPF2-201ENST00000356352 NAA35Q5VZE5 725 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 APOA5Q6Q788 366 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 ARHGEF25Q86VW2 580 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 SLC35F6Q8N357 371 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 UHMK1Q8TAS1 419 aaKnown RBP6.95□□□□□ -1.3
UPF2-201ENST00000356352 CFAP36Q96G28 342 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 MAGEB5Q9BZ81 275 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 GCOM2Q9BZD3 368 aaPredicted RBP6.95□□□□□ -1.3
UPF2-201ENST00000356352 GREM2Q9H772 168 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 EPB41L5Q9HCM4 733 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 FBXO40Q9UH90 709 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 CCDC151A5D8V7 595 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 KPNA7A9QM74 516 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 ERVV-1B6SEH8 477 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 PODXLO00592 558 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 ADD2P35612 726 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 RECQLP46063 649 aaPredicted RBP6.95□□□□□ -1.3
UPF2-201ENST00000356352 PLTPP55058 493 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 RWDD2BP57060 319 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 SF3A3Q12874 501 aaKnown RBP eCLIP6.95□□□□□ -1.3
UPF2-201ENST00000356352 LRRC24Q50LG9 513 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 TCP11X2Q5H9J9 407 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 MTBPQ96DY7 904 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 PANX2Q96RD6 677 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 MMTAG2Q9BU76 263 aaKnown RBP6.95□□□□□ -1.3
UPF2-201ENST00000356352 MSTO1Q9BUK6 570 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 TRAIPQ9BWF2 469 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 CALN1Q9BXU9 219 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 PDE11AQ9HCR9 933 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 HMGB3O15347 200 aaKnown RBP6.95□□□□□ -1.3
UPF2-201ENST00000356352 EFCAB14O75071 495 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 DCTN3O75935 186 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 KRT37O76014 449 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 PLS3P13797 630 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 ORC2Q13416 577 aaPredicted RBP6.95□□□□□ -1.3
UPF2-201ENST00000356352 SLC12A1Q13621 1099 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 KCTD1Q719H9 257 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 FOXP4Q8IVH2 680 aaPredicted RBP6.95□□□□□ -1.3
UPF2-201ENST00000356352 TRIM62Q9BVG3 475 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 MXD3Q9BW11 206 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 EDEM3Q9BZQ6 932 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 STRIP2Q9ULQ0 834 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 TPX2Q9ULW0 747 aaKnown RBP6.95□□□□□ -1.3
UPF2-201ENST00000356352 CCDC188H7C350 402 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 PLA2G4BP0C869 781 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 EEF1DP29692 281 aaKnown RBP6.95□□□□□ -1.3
UPF2-201ENST00000356352 PHKA1P46020 1223 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 DRP2Q13474 957 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 PPP1R18Q6NYC8 613 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 ERICH1Q86X53 443 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 CRLF3Q8IUI8 442 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 ENOX1Q8TC92 643 aaKnown RBP6.95□□□□□ -1.3
UPF2-201ENST00000356352 PIGSQ96S52 555 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 MYO3BQ8WXR4 1341 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 MAPK13O15264 365 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 SNX2O60749 519 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 GFPT2O94808 682 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 GSPT1P15170 499 aaKnown RBP6.95□□□□□ -1.3
UPF2-201ENST00000356352 ARPP19P56211 112 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 MTERF2Q49AM1 385 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 AP1ARQ63HQ0 302 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 RNF207Q6ZRF8 634 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 FAM133AQ8N9E0 248 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.95□□□□□ -1.3
UPF2-201ENST00000356352 TRPV6Q9H1D0 765 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 NHEJ1Q9H9Q4 299 aaPredicted RBP6.95□□□□□ -1.3
UPF2-201ENST00000356352 TOPORSQ9NS56 1045 aaPredicted RBP6.95□□□□□ -1.3
UPF2-201ENST00000356352 MAN1B1Q9UKM7 699 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 HPCAL4Q9UM19 191 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.95□□□□□ -1.3
UPF2-201ENST00000356352 ATP8A1Q9Y2Q0 1164 aa6.95□□□□□ -1.3
UPF2-201ENST00000356352 MIF4GDA9UHW6 222 aaKnown RBP6.94□□□□□ -1.3
UPF2-201ENST00000356352 GOLGA8MH3BSY2 632 aa6.94□□□□□ -1.3
UPF2-201ENST00000356352 SH2B2O14492 632 aaPredicted RBP6.94□□□□□ -1.3
UPF2-201ENST00000356352 SERPINB2P05120 415 aa6.94□□□□□ -1.3
UPF2-201ENST00000356352 DHX9Q08211 1270 aaKnown RBP6.94□□□□□ -1.3
UPF2-201ENST00000356352 TFDP2Q14188 446 aa6.94□□□□□ -1.3
UPF2-201ENST00000356352 PTPROQ16827 1216 aa6.94□□□□□ -1.3
UPF2-201ENST00000356352 FASTKD5Q7L8L6 764 aaKnown RBP6.94□□□□□ -1.3
UPF2-201ENST00000356352 ZBTB33Q86T24 672 aa6.94□□□□□ -1.3
UPF2-201ENST00000356352 C7orf31Q8N865 590 aa6.94□□□□□ -1.3
UPF2-201ENST00000356352 PYROXD1Q8WU10 500 aa6.94□□□□□ -1.3
UPF2-201ENST00000356352 SNX19Q92543 992 aa6.94□□□□□ -1.3
UPF2-201ENST00000356352 KIF2CQ99661 725 aa6.94□□□□□ -1.3
UPF2-201ENST00000356352 ZMYND12Q9H0C1 365 aa6.94□□□□□ -1.3
UPF2-201ENST00000356352 ATP6V0A4Q9HBG4 840 aa6.94□□□□□ -1.3
UPF2-201ENST00000356352 ASNSD1Q9NWL6 643 aa6.94□□□□□ -1.3
UPF2-201ENST00000356352 NXF1Q9UBU9 619 aaKnown RBP6.94□□□□□ -1.3
UPF2-201ENST00000356352 PCDHA13Q9Y5I0 950 aa6.94□□□□□ -1.3
UPF2-201ENST00000356352 SRPRBQ9Y5M8 271 aaKnown RBP6.94□□□□□ -1.3
UPF2-201ENST00000356352 NEO1Q92859 1461 aa6.94□□□□□ -1.3
UPF2-201ENST00000356352 ATP5HO75947 161 aa6.94□□□□□ -1.3
UPF2-201ENST00000356352 HSPA4LO95757 839 aa6.94□□□□□ -1.3
UPF2-201ENST00000356352 CALB1P05937 261 aa6.94□□□□□ -1.3
UPF2-201ENST00000356352 LIG3P49916 1009 aa6.94□□□□□ -1.3
UPF2-201ENST00000356352 DYNLT1P63172 113 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms