RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 POLR3EQ9NVU0 708 aa4.53□□□□□ -1.68
CNOT4-202ENST00000356162 DDX49Q9Y6V7 483 aaKnown RBP4.53□□□□□ -1.68
CNOT4-202ENST00000356162 DOCK5Q9H7D0 1870 aa4.53□□□□□ -1.69
CNOT4-202ENST00000356162 LTBP2Q14767 1821 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 MYADML2A6NDP7 307 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 J3QL48 77 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 M0R2N6 131 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 CTAGE5O15320 804 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 KPNA6O60684 536 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 LILRB3O75022 631 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 PPFIA3O75145 1194 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 CABYRO75952 493 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 PGK1P00558 417 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 C6orf222P0C671 652 aaPredicted RBP4.52□□□□□ -1.69
CNOT4-202ENST00000356162 TXNP10599 105 aaKnown RBP4.52□□□□□ -1.69
CNOT4-202ENST00000356162 TGFB3P10600 412 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 FDPSP14324 419 aaKnown RBP4.52□□□□□ -1.69
CNOT4-202ENST00000356162 UBA1P22314 1058 aaKnown RBP4.52□□□□□ -1.69
CNOT4-202ENST00000356162 KRT2P35908 639 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 SMCPP49901 116 aaPredicted RBP4.52□□□□□ -1.69
CNOT4-202ENST00000356162 CPT1AP50416 773 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 SH3BP2P78314 561 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 ARHGAP1Q07960 439 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 SEMA3FQ13275 785 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 TRIM29Q14134 588 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 SNX17Q15036 470 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 FSCN1Q16658 493 aaKnown RBP4.52□□□□□ -1.69
CNOT4-202ENST00000356162 CTC1Q2NKJ3 1217 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 BRDTQ58F21 947 aaPredicted RBP4.52□□□□□ -1.69
CNOT4-202ENST00000356162 JAKMIP3Q5VZ66 844 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 CCSAPQ6IQ19 270 aaPredicted RBP4.52□□□□□ -1.69
CNOT4-202ENST00000356162 MOXD1Q6UVY6 613 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 CRYGNQ8WXF5 182 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 TMX3Q96JJ7 454 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 PGBD1Q96JS3 809 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 MXRA8Q9BRK3 442 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 SEZ6LQ9BYH1 1024 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 JADE2Q9NQC1 790 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 TMEM260Q9NX78 707 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 DDX41Q9UJV9 622 aaKnown RBP4.52□□□□□ -1.69
CNOT4-202ENST00000356162 KIAA0100Q14667 2235 aaKnown RBP4.52□□□□□ -1.69
CNOT4-202ENST00000356162 NFASCO94856 1347 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 A0A1W2PQ45 241 aaPredicted RBP4.52□□□□□ -1.69
CNOT4-202ENST00000356162 A0A1W2PQY0 241 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 SPATA31C2B4DYI2 1134 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 MAFGO15525 162 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 SIAH2O43255 324 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 MMP1P03956 469 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 HOXD8P13378 290 aaPredicted RBP4.52□□□□□ -1.69
CNOT4-202ENST00000356162 CIITAP33076 1130 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 CUL4AQ13619 759 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 LAMC2Q13753 1193 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 NEDD9Q14511 834 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 NONOQ15233 471 aaKnown RBP eCLIP4.52□□□□□ -1.69
CNOT4-202ENST00000356162 CELF3Q5SZQ8 465 aaKnown RBP4.52□□□□□ -1.69
CNOT4-202ENST00000356162 GJC2Q5T442 439 aaPredicted RBP4.52□□□□□ -1.69
CNOT4-202ENST00000356162 C1orf53Q5VUE5 145 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 GIMAP8Q8ND71 665 aaPredicted RBP4.52□□□□□ -1.69
CNOT4-202ENST00000356162 PPTC7Q8NI37 304 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 RASGRP4Q8TDF6 673 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 SNX21Q969T3 373 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 PAWRQ96IZ0 340 aaKnown RBP4.52□□□□□ -1.69
CNOT4-202ENST00000356162 NAP1L4Q99733 375 aaKnown RBP4.52□□□□□ -1.69
CNOT4-202ENST00000356162 SENP7Q9BQF6 1050 aa4.52□□□□□ -1.69
CNOT4-202ENST00000356162 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.52□□□□□ -1.69
CNOT4-202ENST00000356162 HTTP42858 3142 aa4.51□□□□□ -1.69
CNOT4-202ENST00000356162 ELP1O95163 1332 aa4.51□□□□□ -1.69
CNOT4-202ENST00000356162 MROH7Q68CQ1 1323 aa4.51□□□□□ -1.69
CNOT4-202ENST00000356162 TANC1Q9C0D5 1861 aa4.51□□□□□ -1.69
CNOT4-202ENST00000356162 A0A0U1RQG5 324 aaPredicted RBP4.51□□□□□ -1.69
CNOT4-202ENST00000356162 CCDC194A0A1B0GVG4 234 aa4.51□□□□□ -1.69
CNOT4-202ENST00000356162 DYNC1LI2O43237 492 aaPredicted RBP4.51□□□□□ -1.69
CNOT4-202ENST00000356162 GGPS1O95749 300 aa4.51□□□□□ -1.69
CNOT4-202ENST00000356162 F12P00748 615 aaPredicted RBP4.51□□□□□ -1.69
CNOT4-202ENST00000356162 MMP3P08254 477 aa4.51□□□□□ -1.69
CNOT4-202ENST00000356162 GCFC2P16383 781 aaKnown RBP4.51□□□□□ -1.69
CNOT4-202ENST00000356162 ACLYP53396 1101 aa4.51□□□□□ -1.69
CNOT4-202ENST00000356162 MLLT1Q03111 559 aaPredicted RBP4.51□□□□□ -1.69
CNOT4-202ENST00000356162 MTMR1Q13613 665 aa4.51□□□□□ -1.69
CNOT4-202ENST00000356162 SAFBQ15424 915 aaKnown RBP eCLIP4.51□□□□□ -1.69
CNOT4-202ENST00000356162 LY6KQ17RY6 165 aa4.51□□□□□ -1.69
CNOT4-202ENST00000356162 CEP55Q53EZ4 464 aa4.51□□□□□ -1.69
CNOT4-202ENST00000356162 KRT40Q6A162 431 aa4.51□□□□□ -1.69
CNOT4-202ENST00000356162 METTL7BQ6UX53 244 aa4.51□□□□□ -1.69
CNOT4-202ENST00000356162 HSCBQ8IWL3 235 aa4.51□□□□□ -1.69
CNOT4-202ENST00000356162 FAM184AQ8NB25 1140 aa4.51□□□□□ -1.69
CNOT4-202ENST00000356162 COPS5Q92905 334 aa4.51□□□□□ -1.69
CNOT4-202ENST00000356162 TNFRSF25Q93038 417 aa4.51□□□□□ -1.69
CNOT4-202ENST00000356162 C8orf76Q96K31 380 aa4.51□□□□□ -1.69
CNOT4-202ENST00000356162 MBOAT7Q96N66 472 aa4.51□□□□□ -1.69
CNOT4-202ENST00000356162 MTG1Q9BT17 334 aaPredicted RBP4.51□□□□□ -1.69
CNOT4-202ENST00000356162 KDM4CQ9H3R0 1056 aa4.51□□□□□ -1.69
CNOT4-202ENST00000356162 KCNJ14Q9UNX9 436 aa4.51□□□□□ -1.69
CNOT4-202ENST00000356162 PCNTO95613 3336 aa4.51□□□□□ -1.69
CNOT4-202ENST00000356162 MYH15Q9Y2K3 1946 aa4.51□□□□□ -1.69
CNOT4-202ENST00000356162 IGLV3-22A0A075B6J6 115 aa4.51□□□□□ -1.69
CNOT4-202ENST00000356162 A6NJR5 290 aa4.51□□□□□ -1.69
CNOT4-202ENST00000356162 K7ELQ4 463 aaPredicted RBP4.51□□□□□ -1.69
CNOT4-202ENST00000356162 ADAMTS3O15072 1205 aa4.51□□□□□ -1.69
CNOT4-202ENST00000356162 ASGR1P07306 291 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms