RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 CLEC4GQ6UXB4 293 aa14.6□□□□□ -0.07
NCDN-201ENST00000356090 NEDD1Q8NHV4 660 aa14.6□□□□□ -0.07
NCDN-201ENST00000356090 CUL5Q93034 780 aa14.6□□□□□ -0.07
NCDN-201ENST00000356090 TRIM51Q9BSJ1 452 aa14.6□□□□□ -0.07
NCDN-201ENST00000356090 A6NNZ2 444 aa14.59□□□□□ -0.07
NCDN-201ENST00000356090 PHF20L1A8MW92 1017 aa14.59□□□□□ -0.07
NCDN-201ENST00000356090 USP17L10C9JJH3 530 aa14.59□□□□□ -0.07
NCDN-201ENST00000356090 G3V3G9 751 aa14.59□□□□□ -0.07
NCDN-201ENST00000356090 PDHBP11177 359 aa14.59□□□□□ -0.07
NCDN-201ENST00000356090 SKOR1P84550 965 aa14.59□□□□□ -0.07
NCDN-201ENST00000356090 IFI16Q16666 785 aaKnown RBP14.59□□□□□ -0.07
NCDN-201ENST00000356090 TUBB8Q3ZCM7 444 aa14.59□□□□□ -0.07
NCDN-201ENST00000356090 DCAF8Q5TAQ9 597 aa14.59□□□□□ -0.07
NCDN-201ENST00000356090 MDM1Q8TC05 714 aa14.59□□□□□ -0.07
NCDN-201ENST00000356090 RPGRQ92834 1020 aaKnown RBP14.59□□□□□ -0.07
NCDN-201ENST00000356090 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.59□□□□□ -0.07
NCDN-201ENST00000356090 FLOT1O75955 427 aa14.59□□□□□ -0.07
NCDN-201ENST00000356090 H2AFZP0C0S5 128 aa14.59□□□□□ -0.07
NCDN-201ENST00000356090 AKR1B1P15121 316 aa14.59□□□□□ -0.07
NCDN-201ENST00000356090 ZNF76P36508 570 aa14.59□□□□□ -0.07
NCDN-201ENST00000356090 FLT3P36888 993 aa14.59□□□□□ -0.07
NCDN-201ENST00000356090 ARHGAP44Q17R89 818 aa14.59□□□□□ -0.07
NCDN-201ENST00000356090 KCNV1Q6PIU1 500 aa14.59□□□□□ -0.07
NCDN-201ENST00000356090 H2AFVQ71UI9 128 aa14.59□□□□□ -0.07
NCDN-201ENST00000356090 ZNF571Q7Z3V5 609 aaPredicted RBP14.59□□□□□ -0.07
NCDN-201ENST00000356090 CCDC25Q86WR0 208 aa14.59□□□□□ -0.07
NCDN-201ENST00000356090 METTL13Q8N6R0 699 aa14.59□□□□□ -0.07
NCDN-201ENST00000356090 FAM196BA6NMK8 535 aa14.59□□□□□ -0.07
NCDN-201ENST00000356090 CHMP2AO43633 222 aa14.59□□□□□ -0.07
NCDN-201ENST00000356090 FGGP02679 453 aa14.59□□□□□ -0.07
NCDN-201ENST00000356090 FAM98CQ17RN3 349 aaKnown RBP14.59□□□□□ -0.07
NCDN-201ENST00000356090 RUFY4Q6ZNE9 571 aa14.59□□□□□ -0.07
NCDN-201ENST00000356090 CYFIP2Q96F07 1278 aa14.59□□□□□ -0.07
NCDN-201ENST00000356090 MTMR9Q96QG7 549 aa14.59□□□□□ -0.07
NCDN-201ENST00000356090 UTP11Q9Y3A2 253 aaKnown RBP14.59□□□□□ -0.07
NCDN-201ENST00000356090 EPB41P11171 864 aaKnown RBP14.58□□□□□ -0.08
NCDN-201ENST00000356090 SLCO1A2P46721 670 aa14.58□□□□□ -0.08
NCDN-201ENST00000356090 IFNAR2P48551 515 aa14.58□□□□□ -0.08
NCDN-201ENST00000356090 PSMD2Q13200 908 aa14.58□□□□□ -0.08
NCDN-201ENST00000356090 INPP4AQ96PE3 977 aaPredicted RBP14.58□□□□□ -0.08
NCDN-201ENST00000356090 TOGARAM1Q9Y4F4 1720 aa14.58□□□□□ -0.08
NCDN-201ENST00000356090 TBCAO75347 108 aaKnown RBP14.58□□□□□ -0.08
NCDN-201ENST00000356090 FXR2P51116 673 aaKnown RBP eCLIP14.58□□□□□ -0.08
NCDN-201ENST00000356090 ASTE1Q2TB18 679 aaPredicted RBP14.58□□□□□ -0.08
NCDN-201ENST00000356090 SLC30A10Q6XR72 485 aa14.58□□□□□ -0.08
NCDN-201ENST00000356090 SFR1Q86XK3 245 aa14.58□□□□□ -0.08
NCDN-201ENST00000356090 ADGRF4Q8IZF3 695 aa14.58□□□□□ -0.08
NCDN-201ENST00000356090 PROM2Q8N271 834 aa14.58□□□□□ -0.08
NCDN-201ENST00000356090 CCDC26Q8TAB7 109 aa14.58□□□□□ -0.08
NCDN-201ENST00000356090 GCNT4Q9P109 453 aa14.58□□□□□ -0.08
NCDN-201ENST00000356090 GMNCA6NCL1 334 aa14.57□□□□□ -0.08
NCDN-201ENST00000356090 CLSTN1O94985 981 aa14.57□□□□□ -0.08
NCDN-201ENST00000356090 UCHL3P15374 230 aa14.57□□□□□ -0.08
NCDN-201ENST00000356090 SCNN1DP51172 638 aa14.57□□□□□ -0.08
NCDN-201ENST00000356090 CASP5P51878 434 aa14.57□□□□□ -0.08
NCDN-201ENST00000356090 GTF2IP78347 998 aa14.57□□□□□ -0.08
NCDN-201ENST00000356090 CACNA2D3Q8IZS8 1091 aa14.57□□□□□ -0.08
NCDN-201ENST00000356090 SCFD1Q8WVM8 642 aa14.57□□□□□ -0.08
NCDN-201ENST00000356090 NCAPGQ9BPX3 1015 aa14.57□□□□□ -0.08
NCDN-201ENST00000356090 NT5C3AQ9H0P0 336 aa14.57□□□□□ -0.08
NCDN-201ENST00000356090 NEUROG2Q9H2A3 272 aa14.57□□□□□ -0.08
NCDN-201ENST00000356090 COL4A1P02462 1669 aa14.57□□□□□ -0.08
NCDN-201ENST00000356090 FRMD3A2A2Y4 597 aa14.57□□□□□ -0.08
NCDN-201ENST00000356090 RFC4P35249 363 aa14.57□□□□□ -0.08
NCDN-201ENST00000356090 PLTPP55058 493 aa14.57□□□□□ -0.08
NCDN-201ENST00000356090 SEMA3FQ13275 785 aa14.57□□□□□ -0.08
NCDN-201ENST00000356090 PTF1AQ7RTS3 328 aa14.57□□□□□ -0.08
NCDN-201ENST00000356090 CCDC13Q8IYE1 715 aa14.57□□□□□ -0.08
NCDN-201ENST00000356090 CHORDC1Q9UHD1 332 aaPredicted RBP14.57□□□□□ -0.08
NCDN-201ENST00000356090 DCDC2CA8MYV0 355 aa14.57□□□□□ -0.08
NCDN-201ENST00000356090 LCA5LO95447 670 aa14.57□□□□□ -0.08
NCDN-201ENST00000356090 GNA14O95837 355 aa14.57□□□□□ -0.08
NCDN-201ENST00000356090 AFPP02771 609 aaKnown RBP14.57□□□□□ -0.08
NCDN-201ENST00000356090 PIK3R5Q8WYR1 880 aa14.57□□□□□ -0.08
NCDN-201ENST00000356090 DNAJC19Q96DA6 116 aa14.57□□□□□ -0.08
NCDN-201ENST00000356090 IKZF4Q9H2S9 585 aa14.57□□□□□ -0.08
NCDN-201ENST00000356090 CTNND1O60716 968 aaKnown RBP14.56□□□□□ -0.08
NCDN-201ENST00000356090 LRRN2O75325 713 aa14.56□□□□□ -0.08
NCDN-201ENST00000356090 FAM107AO95990 144 aa14.56□□□□□ -0.08
NCDN-201ENST00000356090 CPP00450 1065 aa14.56□□□□□ -0.08
NCDN-201ENST00000356090 TAL1P17542 331 aaPredicted RBP14.56□□□□□ -0.08
NCDN-201ENST00000356090 GLYCTKQ8IVS8 523 aa14.56□□□□□ -0.08
NCDN-201ENST00000356090 TRIM59Q8IWR1 403 aa14.56□□□□□ -0.08
NCDN-201ENST00000356090 TBC1D31Q96DN5 1066 aa14.56□□□□□ -0.08
NCDN-201ENST00000356090 NAGPAQ9UK23 515 aa14.56□□□□□ -0.08
NCDN-201ENST00000356090 PCDHA1Q9Y5I3 950 aa14.56□□□□□ -0.08
NCDN-201ENST00000356090 SPDYE3A6NKU9 549 aa14.56□□□□□ -0.08
NCDN-201ENST00000356090 BUB1BO60566 1050 aaPredicted RBP14.56□□□□□ -0.08
NCDN-201ENST00000356090 ECM2O94769 699 aaPredicted RBP14.56□□□□□ -0.08
NCDN-201ENST00000356090 VIMP08670 466 aaKnown RBP14.56□□□□□ -0.08
NCDN-201ENST00000356090 CASP4P49662 377 aa14.56□□□□□ -0.08
NCDN-201ENST00000356090 TCP10Q12799 353 aa14.56□□□□□ -0.08
NCDN-201ENST00000356090 ITGB3BPQ13352 177 aaPredicted RBP14.56□□□□□ -0.08
NCDN-201ENST00000356090 MAEAQ7L5Y9 396 aa14.56□□□□□ -0.08
NCDN-201ENST00000356090 MGARPQ8TDB4 240 aa14.56□□□□□ -0.08
NCDN-201ENST00000356090 DYDC1Q8WWB3 177 aa14.56□□□□□ -0.08
NCDN-201ENST00000356090 RUBCNQ92622 972 aa14.56□□□□□ -0.08
NCDN-201ENST00000356090 OSGEPQ9NPF4 335 aa14.56□□□□□ -0.08
NCDN-201ENST00000356090 HAUS2Q9NVX0 235 aa14.56□□□□□ -0.08
NCDN-201ENST00000356090 AMFRQ9UKV5 643 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms