RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 TTC30AQ86WT1 665 aa12.19□□□□□ -0.46
FN1-204ENST00000356005 PCDHA6Q9UN73 950 aa12.19□□□□□ -0.46
FN1-204ENST00000356005 PCDHA8Q9Y5H6 950 aa12.19□□□□□ -0.46
FN1-204ENST00000356005 KRIT1O00522 736 aa12.19□□□□□ -0.46
FN1-204ENST00000356005 SLC25A27O95847 323 aa12.19□□□□□ -0.46
FN1-204ENST00000356005 PMLP29590 882 aa12.19□□□□□ -0.46
FN1-204ENST00000356005 MAPK4P31152 587 aa12.19□□□□□ -0.46
FN1-204ENST00000356005 PTH1RQ03431 593 aa12.19□□□□□ -0.46
FN1-204ENST00000356005 NFIXQ14938 502 aa12.19□□□□□ -0.46
FN1-204ENST00000356005 MICALL2Q8IY33 904 aa12.19□□□□□ -0.46
FN1-204ENST00000356005 RILPQ96NA2 401 aa12.19□□□□□ -0.46
FN1-204ENST00000356005 PCDHB8Q9UN66 801 aa12.19□□□□□ -0.46
FN1-204ENST00000356005 PASKQ96RG2 1323 aa12.19□□□□□ -0.46
FN1-204ENST00000356005 CPT1AP50416 773 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 KAZNQ674X7 775 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 CNOT6LQ96LI5 555 aaKnown RBP12.18□□□□□ -0.46
FN1-204ENST00000356005 MTFR1LQ9H019 292 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 DYRK4Q9NR20 520 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 H2AFZP0C0S5 128 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 ERCC3P19447 782 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 ZNF568Q3ZCX4 644 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 ZNF667Q5HYK9 610 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 H2AFVQ71UI9 128 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 TSC1Q92574 1164 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.18□□□□□ -0.46
FN1-204ENST00000356005 SAR1BQ9Y6B6 198 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 NEXMIFQ5QGS0 1516 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 LMTK2Q8IWU2 1503 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 SGK1O00141 431 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 PTPN12Q05209 780 aaKnown RBP12.18□□□□□ -0.46
FN1-204ENST00000356005 SPDYE1Q8NFV5 336 aaPredicted RBP12.18□□□□□ -0.46
FN1-204ENST00000356005 STRIP2Q9ULQ0 834 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 ALDH1A1P00352 501 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 ATF2P15336 505 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 TGFB2P61812 414 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 RAPH1Q70E73 1250 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 DHX38Q92620 1227 aaKnown RBP12.18□□□□□ -0.46
FN1-204ENST00000356005 VCX3BQ9H321 246 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 POLR3EQ9NVU0 708 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 ZNF148Q9UQR1 794 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 MOCS3O95396 460 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 HOXA13P31271 388 aaPredicted RBP12.18□□□□□ -0.46
FN1-204ENST00000356005 COG7P83436 770 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 TSTA3Q13630 321 aaPredicted RBP12.18□□□□□ -0.46
FN1-204ENST00000356005 RFX6Q8HWS3 928 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 MXD3Q9BW11 206 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 RFX7Q2KHR2 1363 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 MYH10P35580 1976 aa12.18□□□□□ -0.46
FN1-204ENST00000356005 MRRFQ96E11 262 aaKnown RBP12.18□□□□□ -0.46
FN1-204ENST00000356005 SPDYE2BA6NHP3 402 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 SPDYE6P0CI01 402 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 MXI1P50539 228 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 GTF2A2P52657 109 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 ZNF658Q5TYW1 1059 aaPredicted RBP12.17□□□□□ -0.46
FN1-204ENST00000356005 TIPINQ9BVW5 301 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 INPP5FQ9Y2H2 1132 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 WDR19Q8NEZ3 1342 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 NCOA3Q9Y6Q9 1424 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 UBN2Q6ZU65 1347 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 MAN2A1Q16706 1144 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 ANKRD13AQ8IZ07 590 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 SPZ1Q9BXG8 430 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 CBX8Q9HC52 389 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 RAVER2Q9HCJ3 691 aaKnown RBP12.17□□□□□ -0.46
FN1-204ENST00000356005 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.17□□□□□ -0.46
FN1-204ENST00000356005 KCNK3O14649 394 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 TBXAS1P24557 533 aaPredicted RBP12.17□□□□□ -0.46
FN1-204ENST00000356005 CC2D1AQ6P1N0 951 aaPredicted RBP12.17□□□□□ -0.46
FN1-204ENST00000356005 TOGARAM2Q6ZUX3 1019 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 HVCN1Q96D96 273 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 SLC10A5Q5PT55 438 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 NOP9Q86U38 636 aaKnown RBP12.17□□□□□ -0.46
FN1-204ENST00000356005 DNAAF3Q8N9W5 541 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 OR6B3Q8NGW1 331 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 TRIM31Q9BZY9 425 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 MTX1Q13505 466 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 CEP85LQ5SZL2 805 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 SRRM1Q8IYB3 904 aaKnown RBP12.17□□□□□ -0.46
FN1-204ENST00000356005 DCCP43146 1447 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 SPATA31A5Q5VU36 1347 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 SPATA31A7Q8IWB4 1347 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 CCDC160A6NGH7 325 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 NEMP1O14524 444 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 TROVE2P10155 538 aaKnown RBP eCLIP12.17□□□□□ -0.46
FN1-204ENST00000356005 KLC3Q6P597 504 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 N4BP2L2Q92802 583 aaPredicted RBP12.17□□□□□ -0.46
FN1-204ENST00000356005 TUBGCP2Q9BSJ2 902 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 TEX13BQ9BXU2 312 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 MCAMP43121 646 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 ZNF75DP51815 510 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 CCNYQ8ND76 341 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 DYNLL2Q96FJ2 89 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 MTA3Q9BTC8 594 aa12.17□□□□□ -0.46
FN1-204ENST00000356005 PEX3P56589 373 aa12.16□□□□□ -0.46
FN1-204ENST00000356005 TRIM28Q13263 835 aaKnown RBP12.16□□□□□ -0.46
FN1-204ENST00000356005 THOC5Q13769 683 aaKnown RBP12.16□□□□□ -0.46
FN1-204ENST00000356005 NUDT12Q9BQG2 462 aa12.16□□□□□ -0.46
FN1-204ENST00000356005 TFRCP02786 760 aaKnown RBP12.16□□□□□ -0.46
FN1-204ENST00000356005 TCP1P17987 556 aaKnown RBP12.16□□□□□ -0.46
FN1-204ENST00000356005 MMTAG2Q9BU76 263 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms