RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 SLC16A2P36021 539 aa13.4□□□□□ -0.26
COLCA1-201ENST00000355430 EMBQ6PCB8 327 aa13.4□□□□□ -0.26
COLCA1-201ENST00000355430 MMS19Q96T76 1030 aa13.4□□□□□ -0.26
COLCA1-201ENST00000355430 AP1M1Q9BXS5 423 aa13.4□□□□□ -0.26
COLCA1-201ENST00000355430 RNF14Q9UBS8 474 aa13.4□□□□□ -0.26
COLCA1-201ENST00000355430 AKT3Q9Y243 479 aa13.4□□□□□ -0.26
COLCA1-201ENST00000355430 GNAT1P11488 350 aa13.4□□□□□ -0.26
COLCA1-201ENST00000355430 SNAPC2Q13487 334 aa13.4□□□□□ -0.26
COLCA1-201ENST00000355430 SH3RF3Q8TEJ3 882 aaPredicted RBP13.4□□□□□ -0.26
COLCA1-201ENST00000355430 PARK7Q99497 189 aaKnown RBP13.4□□□□□ -0.26
COLCA1-201ENST00000355430 MAP3K14Q99558 947 aa13.4□□□□□ -0.26
COLCA1-201ENST00000355430 PLA2G12BQ9BX93 195 aa13.4□□□□□ -0.26
COLCA1-201ENST00000355430 METTL14Q9HCE5 456 aaKnown RBP13.4□□□□□ -0.26
COLCA1-201ENST00000355430 USTQ9Y2C2 406 aa13.4□□□□□ -0.26
COLCA1-201ENST00000355430 PNPLA7Q6ZV29 1317 aa13.4□□□□□ -0.27
COLCA1-201ENST00000355430 PGRMC1O00264 195 aaKnown RBP13.39□□□□□ -0.27
COLCA1-201ENST00000355430 ZNF185O15231 689 aa13.39□□□□□ -0.27
COLCA1-201ENST00000355430 PALMO75781 387 aa13.39□□□□□ -0.27
COLCA1-201ENST00000355430 GMPSP49915 693 aaPredicted RBP13.39□□□□□ -0.27
COLCA1-201ENST00000355430 UAP1Q16222 522 aaPredicted RBP13.39□□□□□ -0.27
COLCA1-201ENST00000355430 BZW2Q9Y6E2 419 aaKnown RBP13.39□□□□□ -0.27
COLCA1-201ENST00000355430 ZNF34Q8IZ26 560 aa13.39□□□□□ -0.27
COLCA1-201ENST00000355430 SRBD1Q8N5C6 995 aaKnown RBP13.39□□□□□ -0.27
COLCA1-201ENST00000355430 FDX1P10109 184 aa13.39□□□□□ -0.27
COLCA1-201ENST00000355430 LRRC63Q05C16 580 aa13.39□□□□□ -0.27
COLCA1-201ENST00000355430 ILDR1Q86SU0 546 aaPredicted RBP13.39□□□□□ -0.27
COLCA1-201ENST00000355430 IL17RAQ96F46 866 aa13.39□□□□□ -0.27
COLCA1-201ENST00000355430 ELP3Q9H9T3 547 aa13.39□□□□□ -0.27
COLCA1-201ENST00000355430 MEIS1O00470 390 aa13.39□□□□□ -0.27
COLCA1-201ENST00000355430 GYPCP04921 128 aa13.39□□□□□ -0.27
COLCA1-201ENST00000355430 MYL3P08590 195 aa13.39□□□□□ -0.27
COLCA1-201ENST00000355430 PRDX5P30044 214 aa13.39□□□□□ -0.27
COLCA1-201ENST00000355430 LIG4P49917 911 aa13.39□□□□□ -0.27
COLCA1-201ENST00000355430 SMIM5Q71RC9 77 aa13.39□□□□□ -0.27
COLCA1-201ENST00000355430 DGKHQ86XP1 1220 aa13.39□□□□□ -0.27
COLCA1-201ENST00000355430 GTF3C2Q8WUA4 911 aaPredicted RBP13.39□□□□□ -0.27
COLCA1-201ENST00000355430 OSBPL9Q96SU4 736 aa13.39□□□□□ -0.27
COLCA1-201ENST00000355430 GGA3Q9NZ52 723 aa13.39□□□□□ -0.27
COLCA1-201ENST00000355430 CAPN11Q9UMQ6 739 aa13.39□□□□□ -0.27
COLCA1-201ENST00000355430 STK38LQ9Y2H1 464 aa13.39□□□□□ -0.27
COLCA1-201ENST00000355430 NCAPHQ15003 741 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 RBM46Q8TBY0 533 aaKnown RBP13.38□□□□□ -0.27
COLCA1-201ENST00000355430 ATP8A1Q9Y2Q0 1164 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 CLIC2O15247 247 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 ALDH3A1P30838 453 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 SPP2Q13103 211 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 SLC7A3Q8WY07 619 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 ZNF577Q9BSK1 485 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 DCP1AQ9NPI6 582 aaPredicted RBP13.38□□□□□ -0.27
COLCA1-201ENST00000355430 ADAMTS1Q9UHI8 967 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 PRDM4Q9UKN5 801 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 ITIH6Q6UXX5 1313 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 TBC1D8O95759 1140 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 MRPS9P82933 396 aaKnown RBP13.38□□□□□ -0.27
COLCA1-201ENST00000355430 PSMD2Q13200 908 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 RNF207Q6ZRF8 634 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 WHAMMQ8TF30 809 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 EMILIN3Q9NT22 766 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 PXDNQ92626 1479 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 DMP1Q13316 513 aaPredicted RBP13.38□□□□□ -0.27
COLCA1-201ENST00000355430 UNC13DQ70J99 1090 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 VSIG1Q86XK7 387 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 WDR11Q9BZH6 1224 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 FAM114A2Q9NRY5 505 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 HPSEQ9Y251 543 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.38□□□□□ -0.27
COLCA1-201ENST00000355430 SLIT1O75093 1534 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 A0A1W2PQC6 194 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 POTEMA6NI47 508 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 CSF1RP07333 972 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 FCER1AP12319 257 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 LIN9Q5TKA1 542 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 LRCH2Q5VUJ6 765 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 EFCC1Q9HA90 598 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 PLAAQ9Y263 795 aa13.38□□□□□ -0.27
COLCA1-201ENST00000355430 MYO5BQ9ULV0 1848 aa13.37□□□□□ -0.27
COLCA1-201ENST00000355430 USP17L15C9J2P7 530 aa13.37□□□□□ -0.27
COLCA1-201ENST00000355430 USP17L13C9JLJ4 530 aa13.37□□□□□ -0.27
COLCA1-201ENST00000355430 USP17L11C9JVI0 530 aa13.37□□□□□ -0.27
COLCA1-201ENST00000355430 USP17L18D6R9N7 530 aa13.37□□□□□ -0.27
COLCA1-201ENST00000355430 USP17L22D6RA61 530 aa13.37□□□□□ -0.27
COLCA1-201ENST00000355430 USP17L17D6RBQ6 530 aa13.37□□□□□ -0.27
COLCA1-201ENST00000355430 USP17L19D6RCP7 530 aa13.37□□□□□ -0.27
COLCA1-201ENST00000355430 USP17L20D6RJB6 530 aa13.37□□□□□ -0.27
COLCA1-201ENST00000355430 GFPT2O94808 682 aa13.37□□□□□ -0.27
COLCA1-201ENST00000355430 VEGFAP15692 232 aaPredicted RBP13.37□□□□□ -0.27
COLCA1-201ENST00000355430 DHX9Q08211 1270 aaKnown RBP13.37□□□□□ -0.27
COLCA1-201ENST00000355430 USP17L24Q0WX57 530 aa13.37□□□□□ -0.27
COLCA1-201ENST00000355430 SNCBQ16143 134 aa13.37□□□□□ -0.27
COLCA1-201ENST00000355430 E2F4Q16254 413 aa13.37□□□□□ -0.27
COLCA1-201ENST00000355430 ANGEL2Q5VTE6 544 aaKnown RBP13.37□□□□□ -0.27
COLCA1-201ENST00000355430 EEPD1Q7L9B9 569 aa13.37□□□□□ -0.27
COLCA1-201ENST00000355430 TADA2BQ86TJ2 420 aa13.37□□□□□ -0.27
COLCA1-201ENST00000355430 COG1Q8WTW3 980 aa13.37□□□□□ -0.27
COLCA1-201ENST00000355430 PBKQ96KB5 322 aa13.37□□□□□ -0.27
COLCA1-201ENST00000355430 SEPT9Q9UHD8 586 aaPredicted RBP13.37□□□□□ -0.27
COLCA1-201ENST00000355430 TNNC2P02585 160 aa13.37□□□□□ -0.27
COLCA1-201ENST00000355430 PLA2G4BP0C869 781 aa13.37□□□□□ -0.27
COLCA1-201ENST00000355430 FERP16591 822 aa13.37□□□□□ -0.27
COLCA1-201ENST00000355430 RNASELQ05823 741 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms