RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 PRKCSHP14314 528 aaPredicted RBP19.11■□□□□ 0.65
VPS13B-201ENST00000355155 C4orf19Q8IY42 314 aa19.11■□□□□ 0.65
VPS13B-201ENST00000355155 MAPK8IP1Q9UQF2 711 aa19.11■□□□□ 0.65
VPS13B-201ENST00000355155 GPAT2Q6NUI2 795 aa19.11■□□□□ 0.65
VPS13B-201ENST00000355155 SCFD1Q8WVM8 642 aa19.11■□□□□ 0.65
VPS13B-201ENST00000355155 ZSWIM4Q9H7M6 989 aa19.11■□□□□ 0.65
VPS13B-201ENST00000355155 ELP3Q9H9T3 547 aa19.11■□□□□ 0.65
VPS13B-201ENST00000355155 BTBD7Q9P203 1132 aa19.11■□□□□ 0.65
VPS13B-201ENST00000355155 WRAP73Q9P2S5 460 aaPredicted RBP19.11■□□□□ 0.65
VPS13B-201ENST00000355155 COL4A3BPQ9Y5P4 624 aa19.11■□□□□ 0.65
VPS13B-201ENST00000355155 SLC25A27O95847 323 aa19.1■□□□□ 0.65
VPS13B-201ENST00000355155 DNM2P50570 870 aa19.1■□□□□ 0.65
VPS13B-201ENST00000355155 PABPC4Q13310 644 aaKnown RBP eCLIP19.1■□□□□ 0.65
VPS13B-201ENST00000355155 FIGNQ5HY92 759 aa19.1■□□□□ 0.65
VPS13B-201ENST00000355155 DLK2Q6UY11 383 aa19.1■□□□□ 0.65
VPS13B-201ENST00000355155 TSG101Q99816 390 aa19.1■□□□□ 0.65
VPS13B-201ENST00000355155 STRA6Q9BX79 667 aa19.1■□□□□ 0.65
VPS13B-201ENST00000355155 NAA15Q9BXJ9 866 aaKnown RBP19.1■□□□□ 0.65
VPS13B-201ENST00000355155 SPATA31C2B4DYI2 1134 aa19.1■□□□□ 0.65
VPS13B-201ENST00000355155 GNA14O95837 355 aa19.1■□□□□ 0.65
VPS13B-201ENST00000355155 KCNA2P16389 499 aa19.1■□□□□ 0.65
VPS13B-201ENST00000355155 EIF2AK2P19525 551 aaKnown RBP19.1■□□□□ 0.65
VPS13B-201ENST00000355155 ILDR2Q71H61 639 aa19.1■□□□□ 0.65
VPS13B-201ENST00000355155 MIER3Q7Z3K6 550 aa19.1■□□□□ 0.65
VPS13B-201ENST00000355155 CNKSR2Q8WXI2 1034 aa19.1■□□□□ 0.65
VPS13B-201ENST00000355155 ERGIC2Q96RQ1 377 aa19.1■□□□□ 0.65
VPS13B-201ENST00000355155 RUSC1Q9BVN2 902 aa19.1■□□□□ 0.65
VPS13B-201ENST00000355155 HOMER2Q9NSB8 354 aa19.1■□□□□ 0.65
VPS13B-201ENST00000355155 MAGEC2Q9UBF1 373 aaPredicted RBP19.1■□□□□ 0.65
VPS13B-201ENST00000355155 NRDCO43847 1150 aa19.1■□□□□ 0.65
VPS13B-201ENST00000355155 STX10O60499 249 aa19.1■□□□□ 0.65
VPS13B-201ENST00000355155 MIIPQ5JXC2 388 aa19.1■□□□□ 0.65
VPS13B-201ENST00000355155 NSMFQ6X4W1 530 aa19.1■□□□□ 0.65
VPS13B-201ENST00000355155 HPS3Q969F9 1004 aa19.1■□□□□ 0.65
VPS13B-201ENST00000355155 LXNQ9BS40 222 aa19.1■□□□□ 0.65
VPS13B-201ENST00000355155 BHMT2Q9H2M3 363 aa19.1■□□□□ 0.65
VPS13B-201ENST00000355155 RGS20O76081 388 aa19.09■□□□□ 0.65
VPS13B-201ENST00000355155 IDEP14735 1019 aa19.09■□□□□ 0.65
VPS13B-201ENST00000355155 CTTNQ14247 550 aaKnown RBP19.09■□□□□ 0.65
VPS13B-201ENST00000355155 SAMD1Q6SPF0 538 aaPredicted RBP19.09■□□□□ 0.65
VPS13B-201ENST00000355155 SMAP1Q8IYB5 467 aaPredicted RBP19.09■□□□□ 0.65
VPS13B-201ENST00000355155 RETREG2Q8NC44 543 aa19.09■□□□□ 0.65
VPS13B-201ENST00000355155 KCNN1Q92952 543 aa19.09■□□□□ 0.65
VPS13B-201ENST00000355155 CLMNQ96JQ2 1002 aa19.09■□□□□ 0.65
VPS13B-201ENST00000355155 CNOT6LQ96LI5 555 aaKnown RBP19.09■□□□□ 0.65
VPS13B-201ENST00000355155 FIZ1Q96SL8 496 aa19.09■□□□□ 0.65
VPS13B-201ENST00000355155 SPATC1LQ9H0A9 340 aa19.09■□□□□ 0.65
VPS13B-201ENST00000355155 ANKEF1Q9NU02 776 aa19.09■□□□□ 0.65
VPS13B-201ENST00000355155 GPR162Q16538 588 aa19.09■□□□□ 0.65
VPS13B-201ENST00000355155 NPHP3-ACAD11A0A0J9YXS1 232 aa19.08■□□□□ 0.65
VPS13B-201ENST00000355155 N4BP3O15049 544 aa19.08■□□□□ 0.65
VPS13B-201ENST00000355155 MCCD1P59942 119 aaPredicted RBP19.08■□□□□ 0.65
VPS13B-201ENST00000355155 FKBP3Q00688 224 aaKnown RBP19.08■□□□□ 0.65
VPS13B-201ENST00000355155 SHCBP1Q8NEM2 672 aa19.08■□□□□ 0.65
VPS13B-201ENST00000355155 TUBGCP2Q9BSJ2 902 aa19.08■□□□□ 0.65
VPS13B-201ENST00000355155 ASCC2Q9H1I8 757 aaPredicted RBP19.08■□□□□ 0.65
VPS13B-201ENST00000355155 GOLGB1Q14789 3259 aaKnown RBP19.08■□□□□ 0.65
VPS13B-201ENST00000355155 WDR64B1ANS9 1081 aa19.08■□□□□ 0.64
VPS13B-201ENST00000355155 AKR1B15C9JRZ8 316 aaPredicted RBP19.08■□□□□ 0.64
VPS13B-201ENST00000355155 PDXKO00764 312 aa19.08■□□□□ 0.64
VPS13B-201ENST00000355155 TUBB4AP04350 444 aa19.08■□□□□ 0.64
VPS13B-201ENST00000355155 QARSP47897 775 aaKnown RBP19.08■□□□□ 0.64
VPS13B-201ENST00000355155 CYP4A11Q02928 519 aa19.08■□□□□ 0.64
VPS13B-201ENST00000355155 PRKG1Q13976 671 aa19.08■□□□□ 0.64
VPS13B-201ENST00000355155 HERC4Q5GLZ8 1057 aaPredicted RBP19.08■□□□□ 0.64
VPS13B-201ENST00000355155 MORC4Q8TE76 937 aa19.08■□□□□ 0.64
VPS13B-201ENST00000355155 OPTNQ96CV9 577 aa19.08■□□□□ 0.64
VPS13B-201ENST00000355155 TAB2Q9NYJ8 693 aa19.08■□□□□ 0.64
VPS13B-201ENST00000355155 ARHGAP6O43182 974 aa19.07■□□□□ 0.64
VPS13B-201ENST00000355155 HERVK_113P62684 666 aa19.07■□□□□ 0.64
VPS13B-201ENST00000355155 TPH2Q8IWU9 490 aa19.07■□□□□ 0.64
VPS13B-201ENST00000355155 FAM133AQ8N9E0 248 aa19.07■□□□□ 0.64
VPS13B-201ENST00000355155 FGFBP2Q9BYJ0 223 aa19.07■□□□□ 0.64
VPS13B-201ENST00000355155 TTYH3Q9C0H2 523 aa19.07■□□□□ 0.64
VPS13B-201ENST00000355155 ST6GALNAC4Q9H4F1 302 aa19.07■□□□□ 0.64
VPS13B-201ENST00000355155 MFAP3LO75121 409 aa19.07■□□□□ 0.64
VPS13B-201ENST00000355155 ATG7O95352 703 aa19.07■□□□□ 0.64
VPS13B-201ENST00000355155 GJA5P36382 358 aa19.07■□□□□ 0.64
VPS13B-201ENST00000355155 HSP90AA4PQ58FG1 418 aa19.07■□□□□ 0.64
VPS13B-201ENST00000355155 CNGA4Q8IV77 575 aa19.07■□□□□ 0.64
VPS13B-201ENST00000355155 GLIS3Q8NEA6 775 aa19.07■□□□□ 0.64
VPS13B-201ENST00000355155 OTUD5Q96G74 571 aa19.07■□□□□ 0.64
VPS13B-201ENST00000355155 NUP58Q9BVL2 599 aa19.07■□□□□ 0.64
VPS13B-201ENST00000355155 ASTN1O14525 1302 aa19.07■□□□□ 0.64
VPS13B-201ENST00000355155 A0A1W2PQJ5 194 aa19.06■□□□□ 0.64
VPS13B-201ENST00000355155 CCNE2O96020 404 aa19.06■□□□□ 0.64
VPS13B-201ENST00000355155 GYPCP04921 128 aa19.06■□□□□ 0.64
VPS13B-201ENST00000355155 OSBPP22059 807 aa19.06■□□□□ 0.64
VPS13B-201ENST00000355155 HOXD13P35453 343 aa19.06■□□□□ 0.64
VPS13B-201ENST00000355155 MAPK7Q13164 816 aa19.06■□□□□ 0.64
VPS13B-201ENST00000355155 NYAP1Q6ZVC0 841 aa19.06■□□□□ 0.64
VPS13B-201ENST00000355155 CCAR2Q8N163 923 aaKnown RBP19.06■□□□□ 0.64
VPS13B-201ENST00000355155 UIMC1Q96RL1 719 aa19.06■□□□□ 0.64
VPS13B-201ENST00000355155 MOV10L1Q9BXT6 1211 aaKnown RBP19.06■□□□□ 0.64
VPS13B-201ENST00000355155 ZNF236Q9UL36 1845 aa19.06■□□□□ 0.64
VPS13B-201ENST00000355155 CCP110O43303 1012 aa19.06■□□□□ 0.64
VPS13B-201ENST00000355155 DKC1O60832 514 aaKnown RBP eCLIP19.06■□□□□ 0.64
VPS13B-201ENST00000355155 ATP9AO75110 1047 aa19.06■□□□□ 0.64
VPS13B-201ENST00000355155 COBLO75128 1261 aa19.06■□□□□ 0.64
VPS13B-201ENST00000355155 EIF3JO75822 258 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms