RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 SAMD11Q96NU1 681 aa18.19■□□□□ 0.5
PDGFA-201ENST00000354513 FAM217BQ9NTX9 383 aaPredicted RBP18.19■□□□□ 0.5
PDGFA-201ENST00000354513 ERAP1Q9NZ08 941 aa18.19■□□□□ 0.5
PDGFA-201ENST00000354513 TUBE1Q9UJT0 475 aa18.19■□□□□ 0.5
PDGFA-201ENST00000354513 SPDYE3A6NKU9 549 aa18.18■□□□□ 0.5
PDGFA-201ENST00000354513 ADAMTS3O15072 1205 aa18.18■□□□□ 0.5
PDGFA-201ENST00000354513 ITGB3BPQ13352 177 aaPredicted RBP18.18■□□□□ 0.5
PDGFA-201ENST00000354513 COL19A1Q14993 1142 aa18.18■□□□□ 0.5
PDGFA-201ENST00000354513 BMP2KLQ5H9B9 411 aa18.18■□□□□ 0.5
PDGFA-201ENST00000354513 TAF2Q6P1X5 1199 aa18.18■□□□□ 0.5
PDGFA-201ENST00000354513 MXRA8Q9BRK3 442 aa18.18■□□□□ 0.5
PDGFA-201ENST00000354513 AGO3Q9H9G7 860 aaKnown RBP18.18■□□□□ 0.5
PDGFA-201ENST00000354513 C11orf16Q9NQ32 467 aa18.18■□□□□ 0.5
PDGFA-201ENST00000354513 CDY2AQ9Y6F7 541 aa18.18■□□□□ 0.5
PDGFA-201ENST00000354513 MYO7AQ13402 2215 aa18.17■□□□□ 0.5
PDGFA-201ENST00000354513 STXBP3O00186 592 aa18.17■□□□□ 0.5
PDGFA-201ENST00000354513 ARP10275 920 aa18.17■□□□□ 0.5
PDGFA-201ENST00000354513 CLK2P49760 499 aaKnown RBP18.17■□□□□ 0.5
PDGFA-201ENST00000354513 GPM6BQ13491 265 aa18.17■□□□□ 0.5
PDGFA-201ENST00000354513 LEXMQ3ZCV2 418 aa18.17■□□□□ 0.5
PDGFA-201ENST00000354513 TRAPPC12Q8WVT3 735 aa18.17■□□□□ 0.5
PDGFA-201ENST00000354513 SMARCAD1Q9H4L7 1026 aa18.17■□□□□ 0.5
PDGFA-201ENST00000354513 JPH1Q9HDC5 661 aaPredicted RBP18.17■□□□□ 0.5
PDGFA-201ENST00000354513 RIC8AQ9NPQ8 531 aa18.17■□□□□ 0.5
PDGFA-201ENST00000354513 KCNH7Q9NS40 1196 aa18.17■□□□□ 0.5
PDGFA-201ENST00000354513 TMEM260Q9NX78 707 aa18.17■□□□□ 0.5
PDGFA-201ENST00000354513 NFASCO94856 1347 aa18.16■□□□□ 0.5
PDGFA-201ENST00000354513 INSRRP14616 1297 aa18.16■□□□□ 0.5
PDGFA-201ENST00000354513 IL9P15248 144 aa18.16■□□□□ 0.5
PDGFA-201ENST00000354513 KCNA5P22460 613 aa18.16■□□□□ 0.5
PDGFA-201ENST00000354513 CDC27P30260 824 aa18.16■□□□□ 0.5
PDGFA-201ENST00000354513 IGBP1P78318 339 aa18.16■□□□□ 0.5
PDGFA-201ENST00000354513 PLCB4Q15147 1175 aa18.16■□□□□ 0.5
PDGFA-201ENST00000354513 PPP1R18Q6NYC8 613 aa18.16■□□□□ 0.5
PDGFA-201ENST00000354513 ADGRA3Q8IWK6 1321 aa18.16■□□□□ 0.5
PDGFA-201ENST00000354513 CRIPAKQ8N1N5 446 aa18.16■□□□□ 0.5
PDGFA-201ENST00000354513 NEK9Q8TD19 979 aa18.16■□□□□ 0.5
PDGFA-201ENST00000354513 GLG1Q92896 1179 aa18.16■□□□□ 0.5
PDGFA-201ENST00000354513 ZNF689Q96CS4 500 aaPredicted RBP18.16■□□□□ 0.5
PDGFA-201ENST00000354513 NEK1Q96PY6 1258 aa18.16■□□□□ 0.5
PDGFA-201ENST00000354513 ANO3Q9BYT9 981 aa18.16■□□□□ 0.5
PDGFA-201ENST00000354513 SLC9A2Q9UBY0 812 aa18.16■□□□□ 0.5
PDGFA-201ENST00000354513 C5orf67F2Z3F1 127 aa18.15■□□□□ 0.5
PDGFA-201ENST00000354513 ENPP3O14638 875 aa18.15■□□□□ 0.5
PDGFA-201ENST00000354513 MAFGO15525 162 aa18.15■□□□□ 0.5
PDGFA-201ENST00000354513 NAPAP54920 295 aa18.15■□□□□ 0.5
PDGFA-201ENST00000354513 ACTR2P61160 394 aa18.15■□□□□ 0.5
PDGFA-201ENST00000354513 MRPS6P82932 125 aaKnown RBP18.15■□□□□ 0.5
PDGFA-201ENST00000354513 RTN1Q16799 776 aa18.15■□□□□ 0.5
PDGFA-201ENST00000354513 TSGA10IPQ3SY00 556 aa18.15■□□□□ 0.5
PDGFA-201ENST00000354513 TCEAL5Q5H9L2 206 aa18.15■□□□□ 0.5
PDGFA-201ENST00000354513 TSHZ1Q6ZSZ6 1077 aa18.15■□□□□ 0.5
PDGFA-201ENST00000354513 RTN4RL1Q86UN2 441 aaPredicted RBP18.15■□□□□ 0.5
PDGFA-201ENST00000354513 BANK1Q8NDB2 785 aa18.15■□□□□ 0.5
PDGFA-201ENST00000354513 AGO4Q9HCK5 861 aaKnown RBP18.15■□□□□ 0.5
PDGFA-201ENST00000354513 RBM28Q9NW13 759 aaKnown RBP18.15■□□□□ 0.5
PDGFA-201ENST00000354513 ATG7O95352 703 aa18.14■□□□□ 0.49
PDGFA-201ENST00000354513 CD52P31358 61 aa18.14■□□□□ 0.49
PDGFA-201ENST00000354513 SREBF1P36956 1147 aa18.14■□□□□ 0.49
PDGFA-201ENST00000354513 TIGD5Q53EQ6 642 aa18.14■□□□□ 0.49
PDGFA-201ENST00000354513 DHX32Q7L7V1 743 aaKnown RBP18.14■□□□□ 0.49
PDGFA-201ENST00000354513 FAM178BQ8IXR5 827 aa18.14■□□□□ 0.49
PDGFA-201ENST00000354513 CRYGNQ8WXF5 182 aa18.14■□□□□ 0.49
PDGFA-201ENST00000354513 IL17RAQ96F46 866 aa18.14■□□□□ 0.49
PDGFA-201ENST00000354513 LRFN3Q9BTN0 628 aa18.14■□□□□ 0.49
PDGFA-201ENST00000354513 C1QTNF1Q9BXJ1 281 aa18.14■□□□□ 0.49
PDGFA-201ENST00000354513 FAM49AQ9H0Q0 323 aaPredicted RBP18.14■□□□□ 0.49
PDGFA-201ENST00000354513 NID2Q14112 1375 aa18.13■□□□□ 0.49
PDGFA-201ENST00000354513 IGKV6D-21A0A0A0MT36 114 aa18.13■□□□□ 0.49
PDGFA-201ENST00000354513 GRM6O15303 877 aa18.13■□□□□ 0.49
PDGFA-201ENST00000354513 ZBTB43O43298 467 aa18.13■□□□□ 0.49
PDGFA-201ENST00000354513 CCNE2O96020 404 aa18.13■□□□□ 0.49
PDGFA-201ENST00000354513 CTNNB1P35222 781 aa18.13■□□□□ 0.49
PDGFA-201ENST00000354513 ADCY7P51828 1080 aa18.13■□□□□ 0.49
PDGFA-201ENST00000354513 TMEM62Q0P6H9 643 aa18.13■□□□□ 0.49
PDGFA-201ENST00000354513 PTPROQ16827 1216 aa18.13■□□□□ 0.49
PDGFA-201ENST00000354513 CEP55Q53EZ4 464 aa18.13■□□□□ 0.49
PDGFA-201ENST00000354513 FIBCD1Q8N539 461 aa18.13■□□□□ 0.49
PDGFA-201ENST00000354513 CLP1Q92989 425 aaKnown RBP18.13■□□□□ 0.49
PDGFA-201ENST00000354513 BARHL2Q9NY43 387 aa18.13■□□□□ 0.49
PDGFA-201ENST00000354513 V9GY48 417 aaPredicted RBP18.13■□□□□ 0.49
PDGFA-201ENST00000354513 IGLV3-22A0A075B6J6 115 aa18.12■□□□□ 0.49
PDGFA-201ENST00000354513 KLF18A0A0U1RQI7 1052 aa18.12■□□□□ 0.49
PDGFA-201ENST00000354513 GRXCR2A6NFK2 248 aa18.12■□□□□ 0.49
PDGFA-201ENST00000354513 RRN3P2A6NIE6 340 aa18.12■□□□□ 0.49
PDGFA-201ENST00000354513 GOLGA8AA7E2F4 631 aa18.12■□□□□ 0.49
PDGFA-201ENST00000354513 GOLGA8BA8MQT2 603 aa18.12■□□□□ 0.49
PDGFA-201ENST00000354513 H3BQ06 376 aaPredicted RBP18.12■□□□□ 0.49
PDGFA-201ENST00000354513 MEIS1O00470 390 aa18.12■□□□□ 0.49
PDGFA-201ENST00000354513 DGKIO75912 1065 aa18.12■□□□□ 0.49
PDGFA-201ENST00000354513 CPA1P15085 419 aa18.12■□□□□ 0.49
PDGFA-201ENST00000354513 LTBRP36941 435 aa18.12■□□□□ 0.49
PDGFA-201ENST00000354513 RSPH3Q86UC2 560 aa18.12■□□□□ 0.49
PDGFA-201ENST00000354513 PABPC5Q96DU9 382 aaKnown RBP18.12■□□□□ 0.49
PDGFA-201ENST00000354513 NSUN3Q9H649 340 aaKnown RBP18.12■□□□□ 0.49
PDGFA-201ENST00000354513 PCDHA2Q9Y5H9 948 aa18.12■□□□□ 0.49
PDGFA-201ENST00000354513 TRPV2Q9Y5S1 764 aa18.12■□□□□ 0.49
PDGFA-201ENST00000354513 IGSF9BQ9UPX0 1349 aa18.11■□□□□ 0.49
PDGFA-201ENST00000354513 SMCO2A6NFE2 343 aa18.11■□□□□ 0.49
PDGFA-201ENST00000354513 FAM86B1E9PN63 330 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms