RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 MED26O95402 600 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 EFEMP2O95967 443 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 CPP00450 1065 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 VAV1P15498 845 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 RENBPP51606 427 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 ST5P78524 1137 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 SLC4A8Q2Y0W8 1093 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 UAP1L1Q3KQV9 507 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 ZBTB41Q5SVQ8 909 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 EFCAB2Q5VUJ9 269 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 ARHGAP36Q6ZRI8 547 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 FAM9BQ8IZU0 186 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 SNX27Q96L92 541 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 B3GNT5Q9BYG0 378 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 MAN1C1Q9NR34 630 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 TPSG1Q9NRR2 321 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 GJB4Q9NTQ9 266 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 CORO2BQ9UQ03 480 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 GIT1Q9Y2X7 761 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 WASHC2AQ641Q2 1341 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 SHROOM2Q13796 1616 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 NPHP3-ACAD11A0A0J9YXS1 232 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 TMEM82A0PJX8 343 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 MAN2B1O00754 1011 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 NPHP1O15259 732 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 SLC26A4O43511 780 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 FAM163BP0C2L3 166 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 FAM87AP0C7U9 286 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 SPATA31C1P0DKV0 1188 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 EDNRBP24530 442 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 MORC3Q14149 939 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 TMEM132BQ14DG7 1078 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 C3orf36Q3SXR2 165 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 LONRF3Q496Y0 759 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 TMEM240Q5SV17 173 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 GPR158Q5T848 1215 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 CCDC62Q6P9F0 684 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 LIX1LQ8IVB5 337 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 TMEM52Q8NDY8 209 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 GJA10Q969M2 543 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 CAMKK2Q96RR4 588 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 ALG1Q9BT22 464 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 CDADC1Q9BWV3 514 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 UBA5Q9GZZ9 404 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 ZNF700Q9H0M5 742 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 RRAGCQ9HB90 399 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 PDLIM7Q9NR12 457 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 KLHL11Q9NVR0 708 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 C9orf78Q9NZ63 289 aaPredicted RBP2.06□□□□□ -2.08
BRCA1-202ENST00000354071 EBF1Q9UH73 591 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 MSRAQ9UJ68 235 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 PNMA8BQ9ULN7 279 aaPredicted RBP2.06□□□□□ -2.08
BRCA1-202ENST00000354071 LZTS1Q9Y250 596 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 PPP2R3BQ9Y5P8 575 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 B4E1Z4 1266 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 NDUFS2O75306 463 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 ABCB4P21439 1286 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 PIK3CBP42338 1070 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 HTR3AP46098 478 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 GTF2A2P52657 109 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 ZNF280AP59817 542 aaPredicted RBP2.05□□□□□ -2.08
BRCA1-202ENST00000354071 KIF23Q02241 960 aaPredicted RBP2.05□□□□□ -2.08
BRCA1-202ENST00000354071 RAPGEF1Q13905 1077 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 TRIM25Q14258 630 aaKnown RBP2.05□□□□□ -2.08
BRCA1-202ENST00000354071 KIAA0753Q2KHM9 967 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 TMEM95Q3KNT9 176 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 PITRM1Q5JRX3 1037 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 C11orf74Q86VG3 221 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 CRACR2BQ8N4Y2 399 aaPredicted RBP2.05□□□□□ -2.08
BRCA1-202ENST00000354071 CAMKK1Q8N5S9 505 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 PLBD2Q8NHP8 589 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 PIP4K2CQ8TBX8 421 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 DPF2Q92785 391 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 ERCC4Q92889 916 aaPredicted RBP2.05□□□□□ -2.08
BRCA1-202ENST00000354071 GCC1Q96CN9 775 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 ASPNQ9BXN1 380 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 DUSP15Q9H1R2 295 aaPredicted RBP2.05□□□□□ -2.08
BRCA1-202ENST00000354071 NMRK2Q9NPI5 230 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 BSDC1Q9NW68 430 aaPredicted RBP2.05□□□□□ -2.08
BRCA1-202ENST00000354071 CLDND1Q9NY35 253 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 STAP2Q9UGK3 403 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 PCOLCE2Q9UKZ9 415 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 A0A087WZG4 1122 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 ABHD14A-ACY1A0A1B0GW23 586 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 KLRG2A4D1S0 409 aaPredicted RBP2.05□□□□□ -2.08
BRCA1-202ENST00000354071 ELL2O00472 640 aaPredicted RBP2.05□□□□□ -2.08
BRCA1-202ENST00000354071 SYPP08247 313 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 CELA3BP08861 270 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 CD53P19397 219 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 TACR1P25103 407 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 RNF4P78317 190 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 POU4F1Q01851 419 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 GTF2H3Q13889 308 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 HSF5Q4G112 596 aaPredicted RBP2.05□□□□□ -2.08
BRCA1-202ENST00000354071 GGT6Q6P531 493 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 LVRNQ6Q4G3 990 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 USHBP1Q8N6Y0 703 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 EFHBQ8N7U6 833 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 FBXW5Q969U6 566 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 TRMT2BQ96GJ1 504 aaKnown RBP2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms