RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 PNMA2Q9UL42 364 aa19.69■□□□□ 0.74
CTSB-202ENST00000353047 ZNF233A6NK53 670 aa19.69■□□□□ 0.74
CTSB-202ENST00000353047 UBAP1LF5GYI3 381 aa19.69■□□□□ 0.74
CTSB-202ENST00000353047 HP1BP3Q5SSJ5 553 aaPredicted RBP19.69■□□□□ 0.74
CTSB-202ENST00000353047 HS2ST1Q7LGA3 356 aa19.69■□□□□ 0.74
CTSB-202ENST00000353047 ERMNQ8TAM6 284 aa19.69■□□□□ 0.74
CTSB-202ENST00000353047 ASIC3Q9UHC3 531 aa19.69■□□□□ 0.74
CTSB-202ENST00000353047 ACSL3O95573 720 aa19.69■□□□□ 0.74
CTSB-202ENST00000353047 NKX1-1Q15270 411 aaPredicted RBP19.69■□□□□ 0.74
CTSB-202ENST00000353047 CCDC174Q6PII3 467 aa19.69■□□□□ 0.74
CTSB-202ENST00000353047 ERGIC2Q96RQ1 377 aa19.69■□□□□ 0.74
CTSB-202ENST00000353047 MDH1P40925 334 aaKnown RBP19.68■□□□□ 0.74
CTSB-202ENST00000353047 RCAN1P53805 252 aa19.68■□□□□ 0.74
CTSB-202ENST00000353047 DENND2CQ68D51 928 aa19.68■□□□□ 0.74
CTSB-202ENST00000353047 MMGT1Q8N4V1 131 aa19.68■□□□□ 0.74
CTSB-202ENST00000353047 ANKS4BQ8N8V4 417 aa19.68■□□□□ 0.74
CTSB-202ENST00000353047 LMBR1Q8WVP7 490 aa19.68■□□□□ 0.74
CTSB-202ENST00000353047 SLC24A3Q9HC58 644 aa19.68■□□□□ 0.74
CTSB-202ENST00000353047 TSKSQ9UJT2 592 aa19.68■□□□□ 0.74
CTSB-202ENST00000353047 RSPH10B2B2RC85 870 aa19.68■□□□□ 0.74
CTSB-202ENST00000353047 RSPH10BP0C881 870 aa19.68■□□□□ 0.74
CTSB-202ENST00000353047 GUF1Q8N442 669 aaKnown RBP19.68■□□□□ 0.74
CTSB-202ENST00000353047 ANAPC4Q9UJX5 808 aa19.68■□□□□ 0.74
CTSB-202ENST00000353047 ODF2LQ9ULJ1 636 aa19.68■□□□□ 0.74
CTSB-202ENST00000353047 AFDNP55196 1824 aaKnown RBP19.68■□□□□ 0.74
CTSB-202ENST00000353047 ANKRD62A6NC57 917 aa19.68■□□□□ 0.74
CTSB-202ENST00000353047 PPP1R2P41236 205 aa19.68■□□□□ 0.74
CTSB-202ENST00000353047 CUEDC2Q9H467 287 aa19.68■□□□□ 0.74
CTSB-202ENST00000353047 CASP4P49662 377 aa19.67■□□□□ 0.74
CTSB-202ENST00000353047 C7orf25Q9BPX7 421 aa19.67■□□□□ 0.74
CTSB-202ENST00000353047 OSGEPQ9NPF4 335 aa19.67■□□□□ 0.74
CTSB-202ENST00000353047 HLA-DOAP06340 250 aa19.67■□□□□ 0.74
CTSB-202ENST00000353047 GUCY2CP25092 1073 aa19.67■□□□□ 0.74
CTSB-202ENST00000353047 HSD17B3P37058 310 aa19.67■□□□□ 0.74
CTSB-202ENST00000353047 LRRC63Q05C16 580 aa19.67■□□□□ 0.74
CTSB-202ENST00000353047 FAM118BQ9BPY3 351 aa19.67■□□□□ 0.74
CTSB-202ENST00000353047 ZC3H12CQ9C0D7 883 aaKnown RBP19.67■□□□□ 0.74
CTSB-202ENST00000353047 TAF1DQ9H5J8 278 aaPredicted RBP19.67■□□□□ 0.74
CTSB-202ENST00000353047 CEP83Q9Y592 693 aa19.67■□□□□ 0.74
CTSB-202ENST00000353047 RASSF10A6NK89 507 aa19.67■□□□□ 0.74
CTSB-202ENST00000353047 EEF2P13639 858 aaKnown RBP19.67■□□□□ 0.74
CTSB-202ENST00000353047 PTF1AQ7RTS3 328 aa19.67■□□□□ 0.74
CTSB-202ENST00000353047 C4orf32Q8N8J7 132 aa19.67■□□□□ 0.74
CTSB-202ENST00000353047 MYCBPAPQ8TBZ2 947 aa19.67■□□□□ 0.74
CTSB-202ENST00000353047 BCAS3Q9H6U6 928 aa19.67■□□□□ 0.74
CTSB-202ENST00000353047 CEP72Q9P209 647 aa19.67■□□□□ 0.74
CTSB-202ENST00000353047 LAD1O00515 517 aa19.66■□□□□ 0.74
CTSB-202ENST00000353047 PDHBP11177 359 aa19.66■□□□□ 0.74
CTSB-202ENST00000353047 FGFR4P22455 802 aa19.66■□□□□ 0.74
CTSB-202ENST00000353047 CDC25CP30307 473 aa19.66■□□□□ 0.74
CTSB-202ENST00000353047 ERFP50548 548 aa19.66■□□□□ 0.74
CTSB-202ENST00000353047 MTM1Q13496 603 aa19.66■□□□□ 0.74
CTSB-202ENST00000353047 NYXQ9GZU5 481 aa19.66■□□□□ 0.74
CTSB-202ENST00000353047 GGA1Q9UJY5 639 aa19.66■□□□□ 0.74
CTSB-202ENST00000353047 NALCNQ8IZF0 1738 aa19.66■□□□□ 0.74
CTSB-202ENST00000353047 A0A1W2PRG0 241 aa19.66■□□□□ 0.74
CTSB-202ENST00000353047 MEA1Q16626 185 aa19.66■□□□□ 0.74
CTSB-202ENST00000353047 FMO2Q99518 471 aa19.66■□□□□ 0.74
CTSB-202ENST00000353047 BLOC1S4Q9NUP1 217 aa19.66■□□□□ 0.74
CTSB-202ENST00000353047 USTQ9Y2C2 406 aa19.66■□□□□ 0.74
CTSB-202ENST00000353047 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.66■□□□□ 0.746e-6■■□□□ 13.9
CTSB-202ENST00000353047 GMNCA6NCL1 334 aa19.66■□□□□ 0.74
CTSB-202ENST00000353047 NEBLO76041 1014 aa19.66■□□□□ 0.74
CTSB-202ENST00000353047 AFPP02771 609 aaKnown RBP19.66■□□□□ 0.74
CTSB-202ENST00000353047 MYBP10242 640 aa19.66■□□□□ 0.74
CTSB-202ENST00000353047 SSTR3P32745 418 aaPredicted RBP19.66■□□□□ 0.74
CTSB-202ENST00000353047 KCNJ1P48048 391 aa19.66■□□□□ 0.74
CTSB-202ENST00000353047 AARSP49588 968 aaKnown RBP eCLIP19.66■□□□□ 0.74
CTSB-202ENST00000353047 SLC18A3Q16572 532 aa19.66■□□□□ 0.74
CTSB-202ENST00000353047 EPN3Q9H201 632 aa19.66■□□□□ 0.74
CTSB-202ENST00000353047 HOMER2Q9NSB8 354 aa19.66■□□□□ 0.74
CTSB-202ENST00000353047 INTS9Q9NV88 658 aaKnown RBP19.66■□□□□ 0.74
CTSB-202ENST00000353047 ATMINO43313 823 aaPredicted RBP19.65■□□□□ 0.74
CTSB-202ENST00000353047 PCP11498 1178 aaKnown RBP19.65■□□□□ 0.74
CTSB-202ENST00000353047 ERVK-9P63128 1117 aa19.65■□□□□ 0.74
CTSB-202ENST00000353047 ZC2HC1CQ53FD0 456 aaPredicted RBP19.65■□□□□ 0.74
CTSB-202ENST00000353047 TRIM68Q6AZZ1 485 aa19.65■□□□□ 0.74
CTSB-202ENST00000353047 DAAM1Q9Y4D1 1078 aa19.65■□□□□ 0.74
CTSB-202ENST00000353047 ABCC6O95255 1503 aa19.65■□□□□ 0.74
CTSB-202ENST00000353047 CCDC172P0C7W6 258 aa19.65■□□□□ 0.74
CTSB-202ENST00000353047 FLT3P36888 993 aa19.65■□□□□ 0.74
CTSB-202ENST00000353047 KCNA1Q09470 495 aa19.65■□□□□ 0.74
CTSB-202ENST00000353047 ADGRF4Q8IZF3 695 aa19.65■□□□□ 0.74
CTSB-202ENST00000353047 METTL13Q8N6R0 699 aa19.65■□□□□ 0.74
CTSB-202ENST00000353047 PNMA5Q96PV4 448 aa19.65■□□□□ 0.74
CTSB-202ENST00000353047 KLC4Q9NSK0 619 aa19.65■□□□□ 0.74
CTSB-202ENST00000353047 STK17AQ9UEE5 414 aa19.65■□□□□ 0.74
CTSB-202ENST00000353047 LRRC37A3O60309 1634 aa19.65■□□□□ 0.74
CTSB-202ENST00000353047 RPL13P26373 211 aaKnown RBP19.65■□□□□ 0.74
CTSB-202ENST00000353047 NMT1P30419 496 aaKnown RBP19.65■□□□□ 0.74
CTSB-202ENST00000353047 PTGISQ16647 500 aa19.65■□□□□ 0.74
CTSB-202ENST00000353047 AADACL2Q6P093 401 aa19.65■□□□□ 0.74
CTSB-202ENST00000353047 ANKS1AQ92625 1134 aa19.65■□□□□ 0.74
CTSB-202ENST00000353047 CYFIP2Q96F07 1278 aa19.65■□□□□ 0.74
CTSB-202ENST00000353047 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.65■□□□□ 0.74
CTSB-202ENST00000353047 PSMC6P62333 389 aa19.64■□□□□ 0.74
CTSB-202ENST00000353047 CENPPQ6IPU0 288 aa19.64■□□□□ 0.74
CTSB-202ENST00000353047 RIC8AQ9NPQ8 531 aa19.64■□□□□ 0.74
CTSB-202ENST00000353047 DBR1Q9UK59 544 aaKnown RBP19.64■□□□□ 0.74
CTSB-202ENST00000353047 GOLGA8IPA6NC78 632 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms