RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 RSPH14Q9UHP6 348 aa13.28□□□□□ -0.28
SMAD9-201ENST00000350148 UBE4BO95155 1302 aa13.28□□□□□ -0.28
SMAD9-201ENST00000350148 IPO5O00410 1097 aaKnown RBP13.27□□□□□ -0.28
SMAD9-201ENST00000350148 SLC25A27O95847 323 aa13.27□□□□□ -0.28
SMAD9-201ENST00000350148 SNAP25P60880 206 aa13.27□□□□□ -0.28
SMAD9-201ENST00000350148 PDXDC2PQ6P474 469 aa13.27□□□□□ -0.28
SMAD9-201ENST00000350148 INTS8Q75QN2 995 aaKnown RBP13.27□□□□□ -0.28
SMAD9-201ENST00000350148 METTL16Q86W50 562 aaKnown RBP13.27□□□□□ -0.28
SMAD9-201ENST00000350148 KIAA1524Q8TCG1 905 aa13.27□□□□□ -0.28
SMAD9-201ENST00000350148 PRMT6Q96LA8 375 aaPredicted RBP13.27□□□□□ -0.28
SMAD9-201ENST00000350148 TYW1Q9NV66 732 aaKnown RBP13.27□□□□□ -0.28
SMAD9-201ENST00000350148 NRBP1Q9UHY1 535 aa13.27□□□□□ -0.28
SMAD9-201ENST00000350148 NHSL1Q5SYE7 1610 aa13.27□□□□□ -0.28
SMAD9-201ENST00000350148 A0A1W2PQC6 194 aa13.27□□□□□ -0.28
SMAD9-201ENST00000350148 ZSCAN20P17040 1043 aaPredicted RBP13.27□□□□□ -0.28
SMAD9-201ENST00000350148 DEFB132Q7Z7B7 95 aa13.27□□□□□ -0.28
SMAD9-201ENST00000350148 SMYD4Q8IYR2 804 aaPredicted RBP13.27□□□□□ -0.28
SMAD9-201ENST00000350148 CTTNBP2NLQ9P2B4 639 aa13.27□□□□□ -0.28
SMAD9-201ENST00000350148 H2AFZP0C0S5 128 aa13.27□□□□□ -0.29
SMAD9-201ENST00000350148 YARSP54577 528 aaKnown RBP13.27□□□□□ -0.29
SMAD9-201ENST00000350148 DPYDQ12882 1025 aa13.27□□□□□ -0.29
SMAD9-201ENST00000350148 CTTNQ14247 550 aaKnown RBP13.27□□□□□ -0.29
SMAD9-201ENST00000350148 H2AFVQ71UI9 128 aa13.27□□□□□ -0.29
SMAD9-201ENST00000350148 RSPH3Q86UC2 560 aa13.27□□□□□ -0.29
SMAD9-201ENST00000350148 PFASO15067 1338 aa13.27□□□□□ -0.29
SMAD9-201ENST00000350148 MEIS1O00470 390 aa13.27□□□□□ -0.29
SMAD9-201ENST00000350148 KIAA0391O15091 583 aaKnown RBP13.27□□□□□ -0.29
SMAD9-201ENST00000350148 RHOBTB3O94955 611 aa13.27□□□□□ -0.29
SMAD9-201ENST00000350148 RBL2Q08999 1139 aa13.27□□□□□ -0.29
SMAD9-201ENST00000350148 GRM1Q13255 1194 aa13.27□□□□□ -0.29
SMAD9-201ENST00000350148 SMC1AQ14683 1233 aaKnown RBP13.27□□□□□ -0.29
SMAD9-201ENST00000350148 PNMA8AQ86V59 439 aaPredicted RBP13.27□□□□□ -0.29
SMAD9-201ENST00000350148 DEFB129Q9H1M3 183 aa13.27□□□□□ -0.29
SMAD9-201ENST00000350148 PDE6CP51160 858 aa13.26□□□□□ -0.29
SMAD9-201ENST00000350148 CROCCP2Q86T23 111 aa13.26□□□□□ -0.29
SMAD9-201ENST00000350148 METTL13Q8N6R0 699 aa13.26□□□□□ -0.29
SMAD9-201ENST00000350148 AKT1S1Q96B36 256 aa13.26□□□□□ -0.29
SMAD9-201ENST00000350148 EIF2AK1Q9BQI3 630 aaKnown RBP13.26□□□□□ -0.29
SMAD9-201ENST00000350148 HYOU1Q9Y4L1 999 aa13.26□□□□□ -0.29
SMAD9-201ENST00000350148 MAP2K2P36507 400 aa13.26□□□□□ -0.29
SMAD9-201ENST00000350148 NAA25Q14CX7 972 aa13.26□□□□□ -0.29
SMAD9-201ENST00000350148 PADI6Q6TGC4 694 aa13.26□□□□□ -0.29
SMAD9-201ENST00000350148 RBM43Q6ZSC3 357 aaKnown RBP13.26□□□□□ -0.29
SMAD9-201ENST00000350148 SAR1BQ9Y6B6 198 aa13.26□□□□□ -0.29
SMAD9-201ENST00000350148 RFX1P22670 979 aa13.26□□□□□ -0.29
SMAD9-201ENST00000350148 SNRPFP62306 86 aaKnown RBP13.26□□□□□ -0.29
SMAD9-201ENST00000350148 MTMR2Q13614 643 aa13.26□□□□□ -0.29
SMAD9-201ENST00000350148 AMFRQ9UKV5 643 aa13.26□□□□□ -0.29
SMAD9-201ENST00000350148 PITPNM2Q9BZ72 1349 aa13.26□□□□□ -0.29
SMAD9-201ENST00000350148 ANGEL2Q5VTE6 544 aaKnown RBP13.26□□□□□ -0.29
SMAD9-201ENST00000350148 DHX40Q8IX18 779 aaKnown RBP13.26□□□□□ -0.29
SMAD9-201ENST00000350148 DYDC2Q96IM9 177 aa13.26□□□□□ -0.29
SMAD9-201ENST00000350148 RGPD2P0DJD1 1756 aa13.26□□□□□ -0.29
SMAD9-201ENST00000350148 PRCPP42785 496 aa13.26□□□□□ -0.29
SMAD9-201ENST00000350148 LRRC41Q15345 812 aa13.26□□□□□ -0.29
SMAD9-201ENST00000350148 CACTINQ8WUQ7 758 aaKnown RBP13.26□□□□□ -0.29
SMAD9-201ENST00000350148 TRIM9Q9C026 710 aa13.26□□□□□ -0.29
SMAD9-201ENST00000350148 TMEM110-MUSTN1A8MSY1 372 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 SERPING1P05155 500 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 ICAM1P05362 532 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 VIL1P09327 827 aaKnown RBP13.25□□□□□ -0.29
SMAD9-201ENST00000350148 SHMT1P34896 483 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 APOBEC3HQ6NTF7 200 aaKnown RBP13.25□□□□□ -0.29
SMAD9-201ENST00000350148 RPAINQ86UA6 219 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 ADARB2Q9NS39 739 aaKnown RBP13.25□□□□□ -0.29
SMAD9-201ENST00000350148 GDAQ9Y2T3 454 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 TMEM191BP0C7N4 346 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 CXCL9Q07325 125 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 KNOP1Q1ED39 458 aaKnown RBP13.25□□□□□ -0.29
SMAD9-201ENST00000350148 HDXQ7Z353 690 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 PEX26Q7Z412 305 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 CEP57Q86XR8 500 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 CAPZA3Q96KX2 299 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 POLR3CQ9BUI4 534 aaPredicted RBP13.25□□□□□ -0.29
SMAD9-201ENST00000350148 C2orf40Q9H1Z8 148 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 FEZ2Q9UHY8 353 aaPredicted RBP13.25□□□□□ -0.29
SMAD9-201ENST00000350148 MFAP3LO75121 409 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 KCNJ6P48051 423 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 TTLL4Q14679 1199 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 ARHGAP44Q17R89 818 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 IFT20Q8IY31 132 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 SUGCTQ9HAC7 445 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 PCDHA10Q9Y5I2 948 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 DUOX1Q9NRD9 1551 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 PRR29P0C7W0 189 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 RDH13Q8NBN7 331 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 U2AF1L4Q8WU68 220 aaKnown RBP13.25□□□□□ -0.29
SMAD9-201ENST00000350148 MKL1Q969V6 931 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 GGA3Q9NZ52 723 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 RNF14Q9UBS8 474 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 LIMA1Q9UHB6 759 aaKnown RBP13.25□□□□□ -0.29
SMAD9-201ENST00000350148 HPSEQ9Y251 543 aa13.25□□□□□ -0.29
SMAD9-201ENST00000350148 VIRMAQ69YN4 1812 aaKnown RBP13.25□□□□□ -0.29
SMAD9-201ENST00000350148 ACTN4O43707 911 aaKnown RBP13.24□□□□□ -0.29
SMAD9-201ENST00000350148 NFIAQ12857 509 aa13.24□□□□□ -0.29
SMAD9-201ENST00000350148 CCDC50Q8IVM0 306 aa13.24□□□□□ -0.29
SMAD9-201ENST00000350148 PPP1R13BQ96KQ4 1090 aa13.24□□□□□ -0.29
SMAD9-201ENST00000350148 MORC2Q9Y6X9 1032 aaPredicted RBP13.24□□□□□ -0.29
SMAD9-201ENST00000350148 POTEB3A0JP26 581 aa13.24□□□□□ -0.29
SMAD9-201ENST00000350148 POTECB2RU33 542 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms