RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 TCERG1LQ5VWI1 586 aa16.52■□□□□ 0.24
PTBP1-201ENST00000349038 ENAHQ8N8S7 591 aaPredicted RBP16.52■□□□□ 0.24
PTBP1-201ENST00000349038 ATP2A2P16615 1042 aaKnown RBP16.52■□□□□ 0.24
PTBP1-201ENST00000349038 CYP7A1P22680 504 aa16.52■□□□□ 0.24
PTBP1-201ENST00000349038 SLC8A3P57103 927 aa16.52■□□□□ 0.24
PTBP1-201ENST00000349038 UBE4AQ14139 1066 aa16.52■□□□□ 0.24
PTBP1-201ENST00000349038 ESR2Q92731 530 aa16.52■□□□□ 0.24
PTBP1-201ENST00000349038 THAP9Q9H5L6 903 aa16.52■□□□□ 0.24
PTBP1-201ENST00000349038 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.52■□□□□ 0.245e-7■■■■■ 80.5
PTBP1-201ENST00000349038 CHORDC1Q9UHD1 332 aaPredicted RBP16.52■□□□□ 0.24
PTBP1-201ENST00000349038 INTUQ9ULD6 942 aa16.52■□□□□ 0.24
PTBP1-201ENST00000349038 PTPN22Q9Y2R2 807 aa16.52■□□□□ 0.24
PTBP1-201ENST00000349038 TCP11X1B4DZS4 312 aa16.52■□□□□ 0.23
PTBP1-201ENST00000349038 PPIP5K2O43314 1243 aa16.52■□□□□ 0.23
PTBP1-201ENST00000349038 TXKP42681 527 aa16.52■□□□□ 0.23
PTBP1-201ENST00000349038 TUBP50607 506 aa16.52■□□□□ 0.23
PTBP1-201ENST00000349038 RAD23BP54727 409 aa16.52■□□□□ 0.23
PTBP1-201ENST00000349038 MIIPQ5JXC2 388 aa16.52■□□□□ 0.23
PTBP1-201ENST00000349038 SFMBT2Q5VUG0 894 aa16.52■□□□□ 0.23
PTBP1-201ENST00000349038 USP38Q8NB14 1042 aa16.52■□□□□ 0.23
PTBP1-201ENST00000349038 TMEM237Q96Q45 408 aa16.52■□□□□ 0.23
PTBP1-201ENST00000349038 ETNK1Q9HBU6 452 aa16.52■□□□□ 0.23
PTBP1-201ENST00000349038 DLGAP2Q9P1A6 1054 aa16.52■□□□□ 0.23
PTBP1-201ENST00000349038 SWAP70Q9UH65 585 aa16.52■□□□□ 0.23
PTBP1-201ENST00000349038 TRMT112Q9UI30 125 aaKnown RBP16.52■□□□□ 0.23
PTBP1-201ENST00000349038 ANKRD36CQ5JPF3 1778 aa16.51■□□□□ 0.23
PTBP1-201ENST00000349038 LRRD1A4D1F6 860 aa16.51■□□□□ 0.23
PTBP1-201ENST00000349038 ORC4O43929 436 aa16.51■□□□□ 0.23
PTBP1-201ENST00000349038 HIP1RO75146 1068 aa16.51■□□□□ 0.23
PTBP1-201ENST00000349038 NQO1P15559 274 aaKnown RBP16.51■□□□□ 0.23
PTBP1-201ENST00000349038 VWA3BQ502W6 1294 aa16.51■□□□□ 0.23
PTBP1-201ENST00000349038 RNF220Q5VTB9 566 aa16.51■□□□□ 0.23
PTBP1-201ENST00000349038 RPUSD2Q8IZ73 545 aaKnown RBP16.51■□□□□ 0.23
PTBP1-201ENST00000349038 CEP120Q8N960 986 aa16.51■□□□□ 0.23
PTBP1-201ENST00000349038 EPS8L3Q8TE67 593 aaKnown RBP16.51■□□□□ 0.23
PTBP1-201ENST00000349038 METTL5Q9NRN9 209 aaKnown RBP16.51■□□□□ 0.23
PTBP1-201ENST00000349038 SH3BP1Q9Y3L3 701 aa16.51■□□□□ 0.23
PTBP1-201ENST00000349038 CCNE1P24864 410 aa16.51■□□□□ 0.23
PTBP1-201ENST00000349038 PAPOLAP51003 745 aaKnown RBP16.51■□□□□ 0.23
PTBP1-201ENST00000349038 PEX26Q7Z412 305 aa16.51■□□□□ 0.23
PTBP1-201ENST00000349038 TEKT4Q8WW24 435 aa16.51■□□□□ 0.23
PTBP1-201ENST00000349038 CDK5RAP3Q96JB5 506 aa16.51■□□□□ 0.23
PTBP1-201ENST00000349038 ZSCAN10Q96SZ4 725 aaPredicted RBP16.51■□□□□ 0.23
PTBP1-201ENST00000349038 TTYH3Q9C0H2 523 aa16.51■□□□□ 0.23
PTBP1-201ENST00000349038 USH1CQ9Y6N9 552 aa16.51■□□□□ 0.23
PTBP1-201ENST00000349038 MARCH6O60337 910 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 LINGO3P0C6S8 592 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 GOLGA8HP0CJ92 632 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 ACTN1P12814 892 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 IL2RBP14784 551 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 ATP4AP20648 1035 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 ABL2P42684 1182 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 BCAMP50895 628 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 FAM114A1Q8IWE2 563 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 PURBQ96QR8 312 aaKnown RBP16.5■□□□□ 0.23
PTBP1-201ENST00000349038 PLCB1Q9NQ66 1216 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 TCP11L1Q9NUJ3 509 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 TMOD3Q9NYL9 352 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 UTP11Q9Y3A2 253 aaKnown RBP16.5■□□□□ 0.23
PTBP1-201ENST00000349038 NOC2LQ9Y3T9 749 aaKnown RBP16.5■□□□□ 0.23
PTBP1-201ENST00000349038 NR2E1Q9Y466 385 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 CREB1P16220 341 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 PECAM1P16284 738 aaPredicted RBP16.5■□□□□ 0.23
PTBP1-201ENST00000349038 HSPA9P38646 679 aaKnown RBP16.5■□□□□ 0.23
PTBP1-201ENST00000349038 LAMB3Q13751 1172 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 NAALADL2Q58DX5 795 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 GJA10Q969M2 543 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 ZFATQ9P243 1243 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 MYH2Q9UKX2 1941 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 SMNDC1O75940 238 aaKnown RBP eCLIP16.5■□□□□ 0.238e-7■■■□□ 16.3
PTBP1-201ENST00000349038 STARD3NLO95772 234 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 FGGP02679 453 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 YY1P25490 414 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 TRAPPC10P48553 1259 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 TROAPQ12815 778 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 SLC29A2Q14542 456 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 TMTC3Q6ZXV5 915 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 CABP7Q86V35 215 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 VSIG1Q86XK7 387 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 FMO2Q99518 471 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 NUCKS1Q9H1E3 243 aaKnown RBP16.5■□□□□ 0.23
PTBP1-201ENST00000349038 ASAP1Q9ULH1 1129 aa16.5■□□□□ 0.23
PTBP1-201ENST00000349038 BICDL2A1A5D9 508 aa16.49■□□□□ 0.23
PTBP1-201ENST00000349038 KLHL33A6NCF5 533 aa16.49■□□□□ 0.23
PTBP1-201ENST00000349038 RFC5P40937 340 aa16.49■□□□□ 0.23
PTBP1-201ENST00000349038 TXNRD1Q16881 649 aa16.49■□□□□ 0.23
PTBP1-201ENST00000349038 DENND2CQ68D51 928 aa16.49■□□□□ 0.23
PTBP1-201ENST00000349038 TMEM154Q6P9G4 183 aa16.49■□□□□ 0.23
PTBP1-201ENST00000349038 SRBD1Q8N5C6 995 aaKnown RBP16.49■□□□□ 0.23
PTBP1-201ENST00000349038 NAF1Q96HR8 494 aaKnown RBP16.49■□□□□ 0.23
PTBP1-201ENST00000349038 CNTNAP5Q8WYK1 1306 aa16.49■□□□□ 0.23
PTBP1-201ENST00000349038 DUOX1Q9NRD9 1551 aa16.49■□□□□ 0.23
PTBP1-201ENST00000349038 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.49■□□□□ 0.23
PTBP1-201ENST00000349038 CCNT1O60563 726 aaKnown RBP16.49■□□□□ 0.23
PTBP1-201ENST00000349038 VPS41P49754 854 aa16.49■□□□□ 0.23
PTBP1-201ENST00000349038 MIGA2Q7L4E1 593 aa16.49■□□□□ 0.23
PTBP1-201ENST00000349038 LRRC15Q8TF66 581 aa16.49■□□□□ 0.23
PTBP1-201ENST00000349038 TRIM4Q9C037 500 aa16.49■□□□□ 0.23
PTBP1-201ENST00000349038 UBA5Q9GZZ9 404 aa16.49■□□□□ 0.23
PTBP1-201ENST00000349038 ISCUQ9H1K1 167 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms