RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 TPD52P55327 224 aaPredicted RBP11.36□□□□□ -0.59
SMG7-201ENST00000347615 DDX42Q86XP3 938 aaKnown RBP eCLIP11.36□□□□□ -0.59
SMG7-201ENST00000347615 FAM118BQ9BPY3 351 aa11.36□□□□□ -0.59
SMG7-201ENST00000347615 GLT8D2Q9H1C3 349 aa11.36□□□□□ -0.59
SMG7-201ENST00000347615 METTL14Q9HCE5 456 aaKnown RBP11.36□□□□□ -0.59
SMG7-201ENST00000347615 SMYD2Q9NRG4 433 aa11.36□□□□□ -0.59
SMG7-201ENST00000347615 SCAF8Q9UPN6 1271 aaKnown RBP11.36□□□□□ -0.59
SMG7-201ENST00000347615 SH2D4AQ9H788 454 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 RIC8AQ9NPQ8 531 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 DNAJC12Q9UKB3 198 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 PTPRMP28827 1452 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 RASGRF2O14827 1237 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 ECEL1O95672 775 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 TROVE2P10155 538 aaKnown RBP eCLIP11.35□□□□□ -0.59
SMG7-201ENST00000347615 GUCY2CP25092 1073 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 REXO1L1PQ8IX06 675 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 ZNF579Q8NAF0 562 aaKnown RBP11.35□□□□□ -0.59
SMG7-201ENST00000347615 IQCDQ96DY2 449 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 CUEDC2Q9H467 287 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 LARSQ9P2J5 1176 aaKnown RBP11.35□□□□□ -0.59
SMG7-201ENST00000347615 A0A1B0GTH6 734 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 DPYDQ12882 1025 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 STK4Q13043 487 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 LRRC43Q8N309 656 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 HIPK4Q8NE63 616 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 SPATA4Q8NEY3 305 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 FAM167BQ9BTA0 163 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 TMOD4Q9NZQ9 345 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 CPSF2Q9P2I0 782 aaKnown RBP11.35□□□□□ -0.59
SMG7-201ENST00000347615 FGFR4P22455 802 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 ATP2B4P23634 1241 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 ASPRV1Q53RT3 343 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 APOL6Q9BWW8 343 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 FIS1Q9Y3D6 152 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 USP42Q9H9J4 1324 aaKnown RBP11.35□□□□□ -0.59
SMG7-201ENST00000347615 RAD17O75943 681 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 SUN1O94901 812 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 POLGP54098 1239 aaPredicted RBP11.35□□□□□ -0.59
SMG7-201ENST00000347615 PPP2R5AQ15172 486 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 ANO3Q9BYT9 981 aa11.35□□□□□ -0.59
SMG7-201ENST00000347615 H7C0C1 242 aa11.34□□□□□ -0.59
SMG7-201ENST00000347615 PPEF1O14829 653 aaPredicted RBP11.34□□□□□ -0.59
SMG7-201ENST00000347615 ATP5OP48047 213 aa11.34□□□□□ -0.59
SMG7-201ENST00000347615 BASP1P80723 227 aaKnown RBP11.34□□□□□ -0.59
SMG7-201ENST00000347615 RFX6Q8HWS3 928 aa11.34□□□□□ -0.59
SMG7-201ENST00000347615 GLYCTKQ8IVS8 523 aa11.34□□□□□ -0.59
SMG7-201ENST00000347615 RAD54LQ92698 747 aa11.34□□□□□ -0.59
SMG7-201ENST00000347615 TMEM60Q9H2L4 133 aa11.34□□□□□ -0.59
SMG7-201ENST00000347615 NXF1Q9UBU9 619 aaKnown RBP11.34□□□□□ -0.59
SMG7-201ENST00000347615 CDC42BPGQ6DT37 1551 aa11.34□□□□□ -0.59
SMG7-201ENST00000347615 EIF2AK2P19525 551 aaKnown RBP11.34□□□□□ -0.59
SMG7-201ENST00000347615 RFX5P48382 616 aaPredicted RBP11.34□□□□□ -0.59
SMG7-201ENST00000347615 YARSP54577 528 aaKnown RBP11.34□□□□□ -0.59
SMG7-201ENST00000347615 MRPS9P82933 396 aaKnown RBP11.34□□□□□ -0.59
SMG7-201ENST00000347615 ARL6IP4Q66PJ3 421 aaKnown RBP11.34□□□□□ -0.59
SMG7-201ENST00000347615 UNC13DQ70J99 1090 aa11.34□□□□□ -0.59
SMG7-201ENST00000347615 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.34□□□□□ -0.59
SMG7-201ENST00000347615 ALDH8A1Q9H2A2 487 aaPredicted RBP11.34□□□□□ -0.59
SMG7-201ENST00000347615 ZWILCHQ9H900 591 aa11.34□□□□□ -0.59
SMG7-201ENST00000347615 BSDC1Q9NW68 430 aaPredicted RBP11.34□□□□□ -0.59
SMG7-201ENST00000347615 ADD3Q9UEY8 706 aaKnown RBP11.34□□□□□ -0.59
SMG7-201ENST00000347615 APBA3O96018 575 aa11.34□□□□□ -0.59
SMG7-201ENST00000347615 SERPINB2P05120 415 aa11.34□□□□□ -0.59
SMG7-201ENST00000347615 RASSF2P50749 326 aa11.34□□□□□ -0.59
SMG7-201ENST00000347615 SEC24CP53992 1094 aa11.34□□□□□ -0.59
SMG7-201ENST00000347615 PEX3P56589 373 aa11.34□□□□□ -0.59
SMG7-201ENST00000347615 ALS2CLQ60I27 953 aa11.34□□□□□ -0.59
SMG7-201ENST00000347615 NEK9Q8TD19 979 aa11.34□□□□□ -0.59
SMG7-201ENST00000347615 CYTH2Q99418 400 aa11.34□□□□□ -0.59
SMG7-201ENST00000347615 TRIM51Q9BSJ1 452 aa11.34□□□□□ -0.59
SMG7-201ENST00000347615 MXD3Q9BW11 206 aa11.34□□□□□ -0.59
SMG7-201ENST00000347615 RBM12Q9NTZ6 932 aaKnown RBP11.34□□□□□ -0.59
SMG7-201ENST00000347615 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.34□□□□□ -0.59
SMG7-201ENST00000347615 STK17AQ9UEE5 414 aa11.34□□□□□ -0.59
SMG7-201ENST00000347615 ATP2C1P98194 919 aaPredicted RBP11.34□□□□□ -0.59
SMG7-201ENST00000347615 RPUSD2Q8IZ73 545 aaKnown RBP11.34□□□□□ -0.59
SMG7-201ENST00000347615 COG1Q8WTW3 980 aa11.34□□□□□ -0.59
SMG7-201ENST00000347615 CFAP36Q96G28 342 aa11.34□□□□□ -0.59
SMG7-201ENST00000347615 FBXL5Q9UKA1 691 aa11.34□□□□□ -0.59
SMG7-201ENST00000347615 TRPC6Q9Y210 931 aa11.34□□□□□ -0.59
SMG7-201ENST00000347615 TRIM37O94972 964 aa11.33□□□□□ -0.59
SMG7-201ENST00000347615 SERPINB6P35237 376 aa11.33□□□□□ -0.59
SMG7-201ENST00000347615 NT5C1BQ96P26 610 aa11.33□□□□□ -0.59
SMG7-201ENST00000347615 ISCA1Q9BUE6 129 aa11.33□□□□□ -0.59
SMG7-201ENST00000347615 KLHL11Q9NVR0 708 aa11.33□□□□□ -0.59
SMG7-201ENST00000347615 FHOD1Q9Y613 1164 aa11.33□□□□□ -0.59
SMG7-201ENST00000347615 STK36Q9NRP7 1315 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 CEP170BQ9Y4F5 1589 aaPredicted RBP11.33□□□□□ -0.6
SMG7-201ENST00000347615 KITP10721 976 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 CYP19A1P11511 503 aaPredicted RBP11.33□□□□□ -0.6
SMG7-201ENST00000347615 CDO1Q16878 200 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 RABL6Q3YEC7 729 aaPredicted RBP11.33□□□□□ -0.6
SMG7-201ENST00000347615 SRLQ86TD4 932 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 CHURC1Q8WUH1 139 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 MPHOSPH6Q99547 160 aaKnown RBP11.33□□□□□ -0.6
SMG7-201ENST00000347615 ALG13Q9NP73 1137 aaKnown RBP11.33□□□□□ -0.6
SMG7-201ENST00000347615 SPAG7O75391 227 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 KRT1P04264 644 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 MFAP3P55082 362 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 LMBRD2Q68DH5 695 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms