RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 RINT1Q6NUQ1 792 aa28■■■□□ 2.07
TRADD-201ENST00000345057 PPP4R3CPQ6ZMV5 832 aa28■■■□□ 2.07
TRADD-201ENST00000345057 OPTNQ96CV9 577 aa28■■■□□ 2.07
TRADD-201ENST00000345057 CNOT6LQ96LI5 555 aaKnown RBP28■■■□□ 2.07
TRADD-201ENST00000345057 INPP4AQ96PE3 977 aaPredicted RBP28■■■□□ 2.07
TRADD-201ENST00000345057 ZHX3Q9H4I2 956 aa28■■■□□ 2.07
TRADD-201ENST00000345057 NPHP3-ACAD11A0A0J9YXS1 232 aa27.99■■■□□ 2.07
TRADD-201ENST00000345057 LGALS16A8MUM7 142 aa27.99■■■□□ 2.07
TRADD-201ENST00000345057 DDX39AO00148 427 aaKnown RBP27.99■■■□□ 2.07
TRADD-201ENST00000345057 PIGOQ8TEQ8 1089 aa27.99■■■□□ 2.07
TRADD-201ENST00000345057 PKD2L1Q9P0L9 805 aa27.99■■■□□ 2.07
TRADD-201ENST00000345057 CLEC11AQ9Y240 323 aa27.99■■■□□ 2.07
TRADD-201ENST00000345057 SAMM50Q9Y512 469 aa27.99■■■□□ 2.07
TRADD-201ENST00000345057 A0A1W2PQC6 194 aa27.98■■■□□ 2.07
TRADD-201ENST00000345057 OSBPP22059 807 aa27.98■■■□□ 2.07
TRADD-201ENST00000345057 LDLRAD1Q5T700 205 aa27.98■■■□□ 2.07
TRADD-201ENST00000345057 ANKRD35Q8N283 1001 aa27.98■■■□□ 2.07
TRADD-201ENST00000345057 KCND1Q9NSA2 647 aa27.98■■■□□ 2.07
TRADD-201ENST00000345057 ODF2LQ9ULJ1 636 aa27.98■■■□□ 2.07
TRADD-201ENST00000345057 WDR64B1ANS9 1081 aa27.98■■■□□ 2.07
TRADD-201ENST00000345057 LYPLA2O95372 231 aa27.98■■■□□ 2.07
TRADD-201ENST00000345057 DNM2P50570 870 aa27.98■■■□□ 2.07
TRADD-201ENST00000345057 MOB2Q70IA6 237 aa27.98■■■□□ 2.07
TRADD-201ENST00000345057 TUBGCP2Q9BSJ2 902 aa27.98■■■□□ 2.07
TRADD-201ENST00000345057 SPATC1LQ9H0A9 340 aa27.98■■■□□ 2.07
TRADD-201ENST00000345057 ASCC2Q9H1I8 757 aaPredicted RBP27.98■■■□□ 2.07
TRADD-201ENST00000345057 OLFML3Q9NRN5 406 aa27.98■■■□□ 2.07
TRADD-201ENST00000345057 SEL1LQ9UBV2 794 aa27.98■■■□□ 2.07
TRADD-201ENST00000345057 AKR1B15C9JRZ8 316 aaPredicted RBP27.97■■■□□ 2.07
TRADD-201ENST00000345057 SLC25A27O95847 323 aa27.97■■■□□ 2.07
TRADD-201ENST00000345057 QARSP47897 775 aaKnown RBP27.97■■■□□ 2.07
TRADD-201ENST00000345057 HERVK_113P62684 666 aa27.97■■■□□ 2.07
TRADD-201ENST00000345057 FKBP3Q00688 224 aaKnown RBP27.97■■■□□ 2.07
TRADD-201ENST00000345057 CACNB1Q02641 598 aaPredicted RBP27.97■■■□□ 2.07
TRADD-201ENST00000345057 UBXN1Q04323 297 aa27.97■■■□□ 2.07
TRADD-201ENST00000345057 RAD51AP2Q09MP3 1159 aa27.97■■■□□ 2.07
TRADD-201ENST00000345057 C1orf186Q6ZWK4 172 aa27.97■■■□□ 2.07
TRADD-201ENST00000345057 RUSC1Q9BVN2 902 aa27.97■■■□□ 2.07
TRADD-201ENST00000345057 TMX1Q9H3N1 280 aa27.97■■■□□ 2.07
TRADD-201ENST00000345057 ARHGEF35A5YM69 484 aa27.96■■■□□ 2.07
TRADD-201ENST00000345057 PRKCSHP14314 528 aaPredicted RBP27.96■■■□□ 2.07
TRADD-201ENST00000345057 MTIF2P46199 727 aaKnown RBP27.96■■■□□ 2.07
TRADD-201ENST00000345057 LRRC41Q15345 812 aa27.96■■■□□ 2.07
TRADD-201ENST00000345057 ZNF746Q6NUN9 644 aaPredicted RBP27.96■■■□□ 2.07
TRADD-201ENST00000345057 CNGA4Q8IV77 575 aa27.96■■■□□ 2.07
TRADD-201ENST00000345057 BANK1Q8NDB2 785 aa27.96■■■□□ 2.07
TRADD-201ENST00000345057 CCDC51Q96ER9 411 aa27.96■■■□□ 2.07
TRADD-201ENST00000345057 SENP7Q9BQF6 1050 aa27.96■■■□□ 2.07
TRADD-201ENST00000345057 BTBD7Q9P203 1132 aa27.96■■■□□ 2.07
TRADD-201ENST00000345057 DBR1Q9UK59 544 aaKnown RBP27.96■■■□□ 2.07
TRADD-201ENST00000345057 FAM13AO94988 1023 aa27.95■■■□□ 2.07
TRADD-201ENST00000345057 SNAPC2Q13487 334 aa27.95■■■□□ 2.07
TRADD-201ENST00000345057 ZCWPW2Q504Y3 356 aa27.95■■■□□ 2.07
TRADD-201ENST00000345057 DNTTIP2Q5QJE6 756 aaKnown RBP27.95■■■□□ 2.07
TRADD-201ENST00000345057 CEP63Q96MT8 703 aa27.95■■■□□ 2.07
TRADD-201ENST00000345057 PURBQ96QR8 312 aaKnown RBP27.95■■■□□ 2.07
TRADD-201ENST00000345057 CCP110O43303 1012 aa27.95■■■□□ 2.06
TRADD-201ENST00000345057 DKC1O60832 514 aaKnown RBP eCLIP27.95■■■□□ 2.06
TRADD-201ENST00000345057 GNA14O95837 355 aa27.95■■■□□ 2.06
TRADD-201ENST00000345057 GUCY2CP25092 1073 aa27.95■■■□□ 2.06
TRADD-201ENST00000345057 SFR1Q86XK3 245 aa27.95■■■□□ 2.06
TRADD-201ENST00000345057 SMAP1Q8IYB5 467 aaPredicted RBP27.95■■■□□ 2.06
TRADD-201ENST00000345057 C17orf53Q8N3J3 647 aaPredicted RBP27.95■■■□□ 2.06
TRADD-201ENST00000345057 SCFD1Q8WVM8 642 aa27.95■■■□□ 2.06
TRADD-201ENST00000345057 PANX2Q96RD6 677 aa27.95■■■□□ 2.06
TRADD-201ENST00000345057 TBC1D7Q9P0N9 293 aa27.95■■■□□ 2.06
TRADD-201ENST00000345057 NFASCO94856 1347 aa27.95■■■□□ 2.06
TRADD-201ENST00000345057 STXBP2Q15833 593 aa27.94■■■□□ 2.06
TRADD-201ENST00000345057 STXBP4Q6ZWJ1 553 aa27.94■■■□□ 2.06
TRADD-201ENST00000345057 TC2NQ8N9U0 490 aa27.94■■■□□ 2.06
TRADD-201ENST00000345057 SLC10A4Q96EP9 437 aa27.94■■■□□ 2.06
TRADD-201ENST00000345057 PARVGQ9HBI0 331 aa27.94■■■□□ 2.06
TRADD-201ENST00000345057 B4DLN1 442 aa27.93■■■□□ 2.06
TRADD-201ENST00000345057 STX10O60499 249 aa27.93■■■□□ 2.06
TRADD-201ENST00000345057 FKBP1BP68106 108 aa27.93■■■□□ 2.06
TRADD-201ENST00000345057 EDRF1Q3B7T1 1238 aa27.93■■■□□ 2.06
TRADD-201ENST00000345057 C4orf19Q8IY42 314 aa27.93■■■□□ 2.06
TRADD-201ENST00000345057 GTF3C2Q8WUA4 911 aaPredicted RBP27.93■■■□□ 2.06
TRADD-201ENST00000345057 NOC4LQ9BVI4 516 aaKnown RBP27.93■■■□□ 2.06
TRADD-201ENST00000345057 NAA15Q9BXJ9 866 aaKnown RBP27.93■■■□□ 2.06
TRADD-201ENST00000345057 PES1O00541 588 aaKnown RBP27.93■■■□□ 2.06
TRADD-201ENST00000345057 ARHGAP6O43182 974 aa27.93■■■□□ 2.06
TRADD-201ENST00000345057 PSMC5P62195 406 aa27.93■■■□□ 2.06
TRADD-201ENST00000345057 PTPN21Q16825 1174 aa27.93■■■□□ 2.06
TRADD-201ENST00000345057 BMT2Q1RMZ1 405 aa27.93■■■□□ 2.06
TRADD-201ENST00000345057 FKBP15Q5T1M5 1219 aa27.93■■■□□ 2.06
TRADD-201ENST00000345057 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.93■■■□□ 2.06
TRADD-201ENST00000345057 EPM2AIP1Q7L775 607 aaPredicted RBP27.93■■■□□ 2.06
TRADD-201ENST00000345057 MPHOSPH6Q99547 160 aaKnown RBP27.93■■■□□ 2.06
TRADD-201ENST00000345057 BAG1Q99933 345 aaPredicted RBP27.93■■■□□ 2.06
TRADD-201ENST00000345057 MRPL44Q9H9J2 332 aaKnown RBP27.93■■■□□ 2.06
TRADD-201ENST00000345057 WRAP73Q9P2S5 460 aaPredicted RBP27.93■■■□□ 2.06
TRADD-201ENST00000345057 EIF3DO15371 548 aaKnown RBP eCLIP27.92■■■□□ 2.06
TRADD-201ENST00000345057 ATP9AO75110 1047 aa27.92■■■□□ 2.06
TRADD-201ENST00000345057 EIF3JO75822 258 aaKnown RBP27.92■■■□□ 2.06
TRADD-201ENST00000345057 LRRC55Q6ZSA7 311 aa27.92■■■□□ 2.06
TRADD-201ENST00000345057 NCAPG2Q86XI2 1143 aa27.92■■■□□ 2.06
TRADD-201ENST00000345057 GLIS3Q8NEA6 775 aa27.92■■■□□ 2.06
TRADD-201ENST00000345057 ZNF507Q8TCN5 953 aa27.92■■■□□ 2.06
TRADD-201ENST00000345057 IQCDQ96DY2 449 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms