RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 RESTQ13127 1097 aa17.89■□□□□ 0.45
SMARCA4-201ENST00000344626 SPDYE2Q495Y8 402 aa17.89■□□□□ 0.45
SMARCA4-201ENST00000344626 SCFD2Q8WU76 684 aa17.89■□□□□ 0.45
SMARCA4-201ENST00000344626 NXF1Q9UBU9 619 aaKnown RBP17.89■□□□□ 0.45
SMARCA4-201ENST00000344626 IL1R1P14778 569 aa17.88■□□□□ 0.45
SMARCA4-201ENST00000344626 EEF1GP26641 437 aaKnown RBP17.88■□□□□ 0.45
SMARCA4-201ENST00000344626 PDZD4Q76G19 769 aaPredicted RBP17.88■□□□□ 0.45
SMARCA4-201ENST00000344626 PSMC4P43686 418 aa17.88■□□□□ 0.45
SMARCA4-201ENST00000344626 MAPK6Q16659 721 aa17.88■□□□□ 0.45
SMARCA4-201ENST00000344626 CNOT6LQ96LI5 555 aaKnown RBP17.88■□□□□ 0.45
SMARCA4-201ENST00000344626 RNF208Q9H0X6 261 aa17.88■□□□□ 0.45
SMARCA4-201ENST00000344626 CCDC85CA6NKD9 419 aa17.88■□□□□ 0.45
SMARCA4-201ENST00000344626 LARGE1O95461 756 aa17.88■□□□□ 0.45
SMARCA4-201ENST00000344626 P4HBP07237 508 aaKnown RBP17.88■□□□□ 0.45
SMARCA4-201ENST00000344626 SYT10Q6XYQ8 523 aa17.88■□□□□ 0.45
SMARCA4-201ENST00000344626 TTLL3Q9Y4R7 772 aa17.88■□□□□ 0.45
SMARCA4-201ENST00000344626 ACTN4O43707 911 aaKnown RBP17.88■□□□□ 0.45
SMARCA4-201ENST00000344626 AFPP02771 609 aaKnown RBP17.88■□□□□ 0.45
SMARCA4-201ENST00000344626 STAT5BP51692 787 aa17.88■□□□□ 0.45
SMARCA4-201ENST00000344626 RGMBQ6NW40 437 aa17.88■□□□□ 0.45
SMARCA4-201ENST00000344626 PPP4R3CPQ6ZMV5 832 aa17.88■□□□□ 0.45
SMARCA4-201ENST00000344626 CEP57Q86XR8 500 aa17.88■□□□□ 0.45
SMARCA4-201ENST00000344626 IFIH1Q9BYX4 1025 aaKnown RBP17.88■□□□□ 0.45
SMARCA4-201ENST00000344626 SFI1A8K8P3 1242 aa17.87■□□□□ 0.45
SMARCA4-201ENST00000344626 GH1P01241 217 aa17.87■□□□□ 0.45
SMARCA4-201ENST00000344626 LRRC41Q15345 812 aa17.87■□□□□ 0.45
SMARCA4-201ENST00000344626 PEX26Q7Z412 305 aa17.87■□□□□ 0.45
SMARCA4-201ENST00000344626 POLD4Q9HCU8 107 aa17.87■□□□□ 0.45
SMARCA4-201ENST00000344626 KIF13AQ9H1H9 1805 aa17.87■□□□□ 0.45
SMARCA4-201ENST00000344626 XPO4Q9C0E2 1151 aaKnown RBP17.87■□□□□ 0.45
SMARCA4-201ENST00000344626 ARFGAP3Q9NP61 516 aa17.87■□□□□ 0.45
SMARCA4-201ENST00000344626 BZW2Q9Y6E2 419 aaKnown RBP17.87■□□□□ 0.45
SMARCA4-201ENST00000344626 SLC9A2Q9UBY0 812 aa17.87■□□□□ 0.45
SMARCA4-201ENST00000344626 PCDHB4Q9Y5E5 795 aa17.87■□□□□ 0.45
SMARCA4-201ENST00000344626 OPA1O60313 960 aa17.87■□□□□ 0.45
SMARCA4-201ENST00000344626 PGK2P07205 417 aa17.87■□□□□ 0.45
SMARCA4-201ENST00000344626 POLR2FP61218 127 aaKnown RBP17.87■□□□□ 0.45
SMARCA4-201ENST00000344626 CHST13Q8NET6 341 aa17.87■□□□□ 0.45
SMARCA4-201ENST00000344626 C2orf40Q9H1Z8 148 aa17.87■□□□□ 0.45
SMARCA4-201ENST00000344626 TERF1P54274 439 aa17.86■□□□□ 0.45
SMARCA4-201ENST00000344626 MOB2Q70IA6 237 aa17.86■□□□□ 0.45
SMARCA4-201ENST00000344626 MAPK4P31152 587 aa17.86■□□□□ 0.45
SMARCA4-201ENST00000344626 QARSP47897 775 aaKnown RBP17.86■□□□□ 0.45
SMARCA4-201ENST00000344626 PPFIA1Q13136 1202 aa17.86■□□□□ 0.45
SMARCA4-201ENST00000344626 RPS6KA1Q15418 735 aa17.86■□□□□ 0.45
SMARCA4-201ENST00000344626 CEP55Q53EZ4 464 aa17.86■□□□□ 0.45
SMARCA4-201ENST00000344626 ERO1AQ96HE7 468 aa17.86■□□□□ 0.45
SMARCA4-201ENST00000344626 KAZALD1Q96I82 304 aa17.86■□□□□ 0.45
SMARCA4-201ENST00000344626 MSTO1Q9BUK6 570 aa17.86■□□□□ 0.45
SMARCA4-201ENST00000344626 TOPORSQ9NS56 1045 aaPredicted RBP17.86■□□□□ 0.45
SMARCA4-201ENST00000344626 TMEM63CQ9P1W3 806 aa17.86■□□□□ 0.45
SMARCA4-201ENST00000344626 TMEM88BA6NKF7 163 aa17.86■□□□□ 0.45
SMARCA4-201ENST00000344626 NSFP46459 744 aaKnown RBP17.86■□□□□ 0.45
SMARCA4-201ENST00000344626 MICALL1Q8N3F8 863 aa17.86■□□□□ 0.45
SMARCA4-201ENST00000344626 ARRDC4Q8NCT1 418 aa17.86■□□□□ 0.45
SMARCA4-201ENST00000344626 PPP2R3CQ969Q6 453 aa17.86■□□□□ 0.45
SMARCA4-201ENST00000344626 PIDD1Q9HB75 910 aa17.86■□□□□ 0.45
SMARCA4-201ENST00000344626 CYP2C8P10632 490 aa17.86■□□□□ 0.45
SMARCA4-201ENST00000344626 RNASE9P60153 205 aaKnown RBP17.86■□□□□ 0.45
SMARCA4-201ENST00000344626 TRIM50Q86XT4 487 aa17.86■□□□□ 0.45
SMARCA4-201ENST00000344626 TUBGCP2Q9BSJ2 902 aa17.86■□□□□ 0.45
SMARCA4-201ENST00000344626 JPH1Q9HDC5 661 aaPredicted RBP17.86■□□□□ 0.45
SMARCA4-201ENST00000344626 POTEMA6NI47 508 aa17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 PSMC5P62195 406 aa17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 PKP1Q13835 747 aa17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 TRPM4Q8TD43 1214 aa17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 PFASO15067 1338 aa17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 DCDC2CA8MYV0 355 aa17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 CXCL11O14625 94 aa17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 KRT81Q14533 505 aa17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 FAM149B1Q96BN6 582 aa17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 MTRQ99707 1265 aa17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 GCOM2Q9BZD3 368 aaPredicted RBP17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 SYNJ2BP-COX16A0A087WUM0 186 aa17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 CLIC2O15247 247 aa17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 IFT122Q9HBG6 1241 aa17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 KIAA1586Q9HCI6 787 aa17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 COX16Q9P0S2 106 aa17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 FEZ2Q9UHY8 353 aaPredicted RBP17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 AMFRQ9UKV5 643 aa17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 PCDHA10Q9Y5I2 948 aa17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 KATNAL1Q9BW62 490 aa17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 FANCLQ9NW38 375 aa17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 ZNF233A6NK53 670 aa17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 MED7O43513 233 aa17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 COPB1P53618 953 aaKnown RBP17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 CCDC25Q86WR0 208 aa17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 ZNF579Q8NAF0 562 aaKnown RBP17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 RAB20Q9NX57 234 aa17.85■□□□□ 0.45
SMARCA4-201ENST00000344626 CCDC63Q8NA47 563 aa17.84■□□□□ 0.45
SMARCA4-201ENST00000344626 IFT81Q8WYA0 676 aa17.84■□□□□ 0.45
SMARCA4-201ENST00000344626 TRIM11Q96F44 468 aa17.84■□□□□ 0.45
SMARCA4-201ENST00000344626 ATP11BQ9Y2G3 1177 aa17.84■□□□□ 0.45
SMARCA4-201ENST00000344626 TYW5A2RUC4 315 aaKnown RBP17.84■□□□□ 0.45
SMARCA4-201ENST00000344626 GOLGA6CA6NDK9 693 aa17.84■□□□□ 0.45
SMARCA4-201ENST00000344626 GOLGA6BA6NDN3 693 aa17.84■□□□□ 0.45
SMARCA4-201ENST00000344626 GOLGA6DP0CG33 693 aa17.84■□□□□ 0.45
SMARCA4-201ENST00000344626 MAN2A1Q16706 1144 aa17.84■□□□□ 0.45
SMARCA4-201ENST00000344626 PADI6Q6TGC4 694 aa17.84■□□□□ 0.45
SMARCA4-201ENST00000344626 GOLGA6AQ9NYA3 693 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms