RNA–Protein interactions for RNA: ENST00000343380.5

E2F1-201, Transcript of E2F transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene E2F1, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1-201ENST00000343380 TAF4BQ92750 862 aa23.06■■□□□ 1.28
E2F1-201ENST00000343380 DDX47Q9H0S4 455 aaKnown RBP23.06■■□□□ 1.28
E2F1-201ENST00000343380 BMP2KQ9NSY1 1161 aaPredicted RBP23.06■■□□□ 1.28
E2F1-201ENST00000343380 AJAP1Q9UKB5 411 aaPredicted RBP23.06■■□□□ 1.28
E2F1-201ENST00000343380 RPS6KA4O75676 772 aa23.05■■□□□ 1.28
E2F1-201ENST00000343380 GNA14O95837 355 aa23.05■■□□□ 1.28
E2F1-201ENST00000343380 EPS15P42566 896 aa23.05■■□□□ 1.28
E2F1-201ENST00000343380 ASPRV1Q53RT3 343 aa23.05■■□□□ 1.28
E2F1-201ENST00000343380 DPP8Q6V1X1 898 aaPredicted RBP23.05■■□□□ 1.28
E2F1-201ENST00000343380 CNPY4Q8N129 248 aa23.05■■□□□ 1.28
E2F1-201ENST00000343380 SPATA31A5Q5VU36 1347 aa23.05■■□□□ 1.28
E2F1-201ENST00000343380 SPATA31A7Q8IWB4 1347 aa23.05■■□□□ 1.28
E2F1-201ENST00000343380 PNMA6FA0A0J9YX94 578 aa23.05■■□□□ 1.28
E2F1-201ENST00000343380 HMGB1P1B2RPK0 211 aaPredicted RBP23.05■■□□□ 1.28
E2F1-201ENST00000343380 ITGA4P13612 1032 aa23.05■■□□□ 1.28
E2F1-201ENST00000343380 NR2F2P24468 414 aa23.05■■□□□ 1.28
E2F1-201ENST00000343380 PICALMQ13492 652 aa23.05■■□□□ 1.28
E2F1-201ENST00000343380 HYIQ5T013 277 aa23.05■■□□□ 1.28
E2F1-201ENST00000343380 MCTP2Q6DN12 878 aa23.05■■□□□ 1.28
E2F1-201ENST00000343380 METTL13Q8N6R0 699 aa23.05■■□□□ 1.28
E2F1-201ENST00000343380 PRPF38AQ8NAV1 312 aaKnown RBP23.05■■□□□ 1.28
E2F1-201ENST00000343380 BCAS3Q9H6U6 928 aa23.05■■□□□ 1.28
E2F1-201ENST00000343380 PLCB1Q9NQ66 1216 aa23.05■■□□□ 1.28
E2F1-201ENST00000343380 HDAC9Q9UKV0 1011 aa23.05■■□□□ 1.28
E2F1-201ENST00000343380 MYH7BA7E2Y1 1941 aa23.04■■□□□ 1.28
E2F1-201ENST00000343380 USP17L15C9J2P7 530 aa23.04■■□□□ 1.28
E2F1-201ENST00000343380 USP17L13C9JLJ4 530 aa23.04■■□□□ 1.28
E2F1-201ENST00000343380 USP17L11C9JVI0 530 aa23.04■■□□□ 1.28
E2F1-201ENST00000343380 USP17L18D6R9N7 530 aa23.04■■□□□ 1.28
E2F1-201ENST00000343380 USP17L22D6RA61 530 aa23.04■■□□□ 1.28
E2F1-201ENST00000343380 USP17L17D6RBQ6 530 aa23.04■■□□□ 1.28
E2F1-201ENST00000343380 USP17L19D6RCP7 530 aa23.04■■□□□ 1.28
E2F1-201ENST00000343380 USP17L20D6RJB6 530 aa23.04■■□□□ 1.28
E2F1-201ENST00000343380 MED24O75448 989 aa23.04■■□□□ 1.28
E2F1-201ENST00000343380 SLURP2P0DP57 97 aa23.04■■□□□ 1.28
E2F1-201ENST00000343380 UCHL3P15374 230 aa23.04■■□□□ 1.28
E2F1-201ENST00000343380 USP17L24Q0WX57 530 aa23.04■■□□□ 1.28
E2F1-201ENST00000343380 USP17L6PQ6QN14 398 aa23.04■■□□□ 1.28
E2F1-201ENST00000343380 ZC3H3Q8IXZ2 948 aaKnown RBP23.04■■□□□ 1.28
E2F1-201ENST00000343380 LRRC4CQ9HCJ2 640 aa23.04■■□□□ 1.28
E2F1-201ENST00000343380 PPANQ9NQ55 473 aaKnown RBP23.04■■□□□ 1.28
E2F1-201ENST00000343380 NAGPAQ9UK23 515 aa23.04■■□□□ 1.28
E2F1-201ENST00000343380 MYH4Q9Y623 1939 aa23.04■■□□□ 1.28
E2F1-201ENST00000343380 POTEFA5A3E0 1075 aa23.04■■□□□ 1.28
E2F1-201ENST00000343380 USP17L10C9JJH3 530 aa23.04■■□□□ 1.28
E2F1-201ENST00000343380 E7EVH7 732 aa23.04■■□□□ 1.28
E2F1-201ENST00000343380 SART1O43290 800 aaKnown RBP23.04■■□□□ 1.28
E2F1-201ENST00000343380 KIAA0754O94854 1291 aa23.04■■□□□ 1.28
E2F1-201ENST00000343380 POTEIP0CG38 1075 aa23.04■■□□□ 1.28
E2F1-201ENST00000343380 HOXD13P35453 343 aa23.04■■□□□ 1.28
E2F1-201ENST00000343380 POTEGQ6S5H5 508 aa23.04■■□□□ 1.28
E2F1-201ENST00000343380 POTEEQ6S8J3 1075 aa23.04■■□□□ 1.28
E2F1-201ENST00000343380 ARHGEF1Q92888 912 aaKnown RBP23.04■■□□□ 1.28
E2F1-201ENST00000343380 CLSTN1O94985 981 aa23.03■■□□□ 1.28
E2F1-201ENST00000343380 ZNF844Q08AG5 666 aa23.03■■□□□ 1.28
E2F1-201ENST00000343380 ZNF543Q08ER8 600 aa23.03■■□□□ 1.28
E2F1-201ENST00000343380 MFSD14BQ5SR56 506 aa23.03■■□□□ 1.28
E2F1-201ENST00000343380 ATXN2Q99700 1313 aaKnown RBP23.03■■□□□ 1.28
E2F1-201ENST00000343380 FAM170AA1A519 330 aa23.03■■□□□ 1.28
E2F1-201ENST00000343380 PSMC6P62333 389 aa23.03■■□□□ 1.28
E2F1-201ENST00000343380 KCTD1Q719H9 257 aa23.03■■□□□ 1.28
E2F1-201ENST00000343380 C1orf131Q8NDD1 294 aaKnown RBP23.03■■□□□ 1.28
E2F1-201ENST00000343380 CUL5Q93034 780 aa23.03■■□□□ 1.28
E2F1-201ENST00000343380 BACH1O14867 736 aa23.02■■□□□ 1.28
E2F1-201ENST00000343380 CETN3O15182 167 aa23.02■■□□□ 1.28
E2F1-201ENST00000343380 UFL1O94874 794 aa23.02■■□□□ 1.28
E2F1-201ENST00000343380 FSBPO95073 299 aa23.02■■□□□ 1.28
E2F1-201ENST00000343380 PON1P27169 355 aa23.02■■□□□ 1.28
E2F1-201ENST00000343380 IFT88Q13099 833 aa23.02■■□□□ 1.28
E2F1-201ENST00000343380 ALKBH5Q6P6C2 394 aaKnown RBP23.02■■□□□ 1.28
E2F1-201ENST00000343380 SPAG5Q96R06 1193 aa23.02■■□□□ 1.28
E2F1-201ENST00000343380 PAGR1Q9BTK6 254 aa23.02■■□□□ 1.28
E2F1-201ENST00000343380 NT5C3AQ9H0P0 336 aa23.02■■□□□ 1.28
E2F1-201ENST00000343380 PSTPIP2Q9H939 334 aa23.02■■□□□ 1.28
E2F1-201ENST00000343380 NOC2LQ9Y3T9 749 aaKnown RBP23.02■■□□□ 1.28
E2F1-201ENST00000343380 COL24A1Q17RW2 1714 aa23.02■■□□□ 1.28
E2F1-201ENST00000343380 BTNL10A8MVZ5 291 aa23.02■■□□□ 1.27
E2F1-201ENST00000343380 TMOD1P28289 359 aa23.02■■□□□ 1.27
E2F1-201ENST00000343380 RNF187Q5TA31 235 aaPredicted RBP23.02■■□□□ 1.27
E2F1-201ENST00000343380 GJB7Q6PEY0 223 aa23.02■■□□□ 1.27
E2F1-201ENST00000343380 TPCN2Q8NHX9 752 aa23.02■■□□□ 1.27
E2F1-201ENST00000343380 ACTRT1Q8TDG2 376 aa23.02■■□□□ 1.27
E2F1-201ENST00000343380 AMACRQ9UHK6 382 aa23.02■■□□□ 1.27
E2F1-201ENST00000343380 IGKV6D-41A0A0C4DH26 115 aa23.01■■□□□ 1.27
E2F1-201ENST00000343380 DCDC2CA8MYV0 355 aa23.01■■□□□ 1.27
E2F1-201ENST00000343380 MEIS1O00470 390 aa23.01■■□□□ 1.27
E2F1-201ENST00000343380 FAM107AO95990 144 aa23.01■■□□□ 1.27
E2F1-201ENST00000343380 KRT18P05783 430 aaKnown RBP23.01■■□□□ 1.27
E2F1-201ENST00000343380 HOXA7P31268 230 aaPredicted RBP23.01■■□□□ 1.27
E2F1-201ENST00000343380 RFC4P35249 363 aa23.01■■□□□ 1.27
E2F1-201ENST00000343380 SLC12A3P55017 1021 aa23.01■■□□□ 1.27
E2F1-201ENST00000343380 BHMG1C9JSJ3 638 aaPredicted RBP23.01■■□□□ 1.27
E2F1-201ENST00000343380 GCOM1H8Y6P7 765 aaPredicted RBP23.01■■□□□ 1.27
E2F1-201ENST00000343380 DAPK3O43293 454 aa23.01■■□□□ 1.27
E2F1-201ENST00000343380 MYZAPP0CAP1 466 aa23.01■■□□□ 1.27
E2F1-201ENST00000343380 CTNNA1P35221 906 aaKnown RBP23.01■■□□□ 1.27
E2F1-201ENST00000343380 MNAT1P51948 309 aa23.01■■□□□ 1.27
E2F1-201ENST00000343380 GABPAQ06546 454 aa23.01■■□□□ 1.27
E2F1-201ENST00000343380 SLC12A6Q9UHW9 1150 aa23.01■■□□□ 1.27
E2F1-201ENST00000343380 FBXL5Q9UKA1 691 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms