RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 TMPRSS15P98073 1019 aa13.09□□□□□ -0.31
SEMA6A-202ENST00000343348 APOA5Q6Q788 366 aa13.09□□□□□ -0.31
SEMA6A-202ENST00000343348 EIF2AQ9BY44 585 aaKnown RBP13.09□□□□□ -0.31
SEMA6A-202ENST00000343348 CCDC90BQ9GZT6 254 aa13.09□□□□□ -0.31
SEMA6A-202ENST00000343348 ALDH1B1P30837 517 aa13.09□□□□□ -0.31
SEMA6A-202ENST00000343348 MTERF2Q49AM1 385 aa13.09□□□□□ -0.31
SEMA6A-202ENST00000343348 C6orf118Q5T5N4 469 aa13.09□□□□□ -0.31
SEMA6A-202ENST00000343348 USP17L2Q6R6M4 530 aa13.09□□□□□ -0.31
SEMA6A-202ENST00000343348 VSTM4Q8IW00 320 aa13.09□□□□□ -0.31
SEMA6A-202ENST00000343348 ZBTB38Q8NAP3 1195 aaPredicted RBP13.09□□□□□ -0.31
SEMA6A-202ENST00000343348 HOOK2Q96ED9 719 aa13.09□□□□□ -0.31
SEMA6A-202ENST00000343348 PAGE5Q96GU1 130 aa13.09□□□□□ -0.31
SEMA6A-202ENST00000343348 DCTN4Q9UJW0 460 aa13.09□□□□□ -0.31
SEMA6A-202ENST00000343348 STRIP2Q9ULQ0 834 aa13.09□□□□□ -0.31
SEMA6A-202ENST00000343348 A0A1W2PQ27 194 aa13.08□□□□□ -0.31
SEMA6A-202ENST00000343348 A0A1W2PQ64 194 aa13.08□□□□□ -0.31
SEMA6A-202ENST00000343348 A0A1W2PQD8 194 aa13.08□□□□□ -0.31
SEMA6A-202ENST00000343348 SYCE1LA8MT33 242 aa13.08□□□□□ -0.31
SEMA6A-202ENST00000343348 CEP170P1Q96L14 293 aa13.08□□□□□ -0.31
SEMA6A-202ENST00000343348 BEGAINQ9BUH8 593 aa13.08□□□□□ -0.31
SEMA6A-202ENST00000343348 H0YCG3 227 aa13.08□□□□□ -0.32
SEMA6A-202ENST00000343348 KCNA1Q09470 495 aa13.08□□□□□ -0.32
SEMA6A-202ENST00000343348 CCDC85BQ15834 202 aaPredicted RBP13.08□□□□□ -0.32
SEMA6A-202ENST00000343348 MTRQ99707 1265 aa13.08□□□□□ -0.32
SEMA6A-202ENST00000343348 CYP2D7A0A087X1C5 515 aa13.08□□□□□ -0.32
SEMA6A-202ENST00000343348 PTPREP23469 700 aa13.08□□□□□ -0.32
SEMA6A-202ENST00000343348 RWDD4Q6NW29 188 aaKnown RBP13.08□□□□□ -0.32
SEMA6A-202ENST00000343348 BABAM1Q9NWV8 329 aa13.08□□□□□ -0.32
SEMA6A-202ENST00000343348 ZBTB12Q9Y330 459 aaPredicted RBP13.08□□□□□ -0.32
SEMA6A-202ENST00000343348 CCDC151A5D8V7 595 aa13.08□□□□□ -0.32
SEMA6A-202ENST00000343348 IKBKBO14920 756 aa13.08□□□□□ -0.32
SEMA6A-202ENST00000343348 ZNF394Q53GI3 561 aa13.08□□□□□ -0.32
SEMA6A-202ENST00000343348 NOP53Q9NZM5 478 aaKnown RBP13.08□□□□□ -0.32
SEMA6A-202ENST00000343348 TTC7AQ9ULT0 858 aaPredicted RBP13.08□□□□□ -0.32
SEMA6A-202ENST00000343348 SNX24Q9Y343 169 aa13.08□□□□□ -0.32
SEMA6A-202ENST00000343348 SRGAP2CP0DJJ0 459 aa13.08□□□□□ -0.32
SEMA6A-202ENST00000343348 LBHD1Q9BQE6 289 aaPredicted RBP13.08□□□□□ -0.32
SEMA6A-202ENST00000343348 NOC2LQ9Y3T9 749 aaKnown RBP13.08□□□□□ -0.32
SEMA6A-202ENST00000343348 ABCC12Q96J65 1359 aa13.08□□□□□ -0.32
SEMA6A-202ENST00000343348 ABCA10Q8WWZ4 1543 aa13.08□□□□□ -0.32
SEMA6A-202ENST00000343348 EMILIN3Q9NT22 766 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 STK17AQ9UEE5 414 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 ADAMTS1Q9UHI8 967 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 E2F6O75461 281 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 MMP1P03956 469 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 SSTR3P32745 418 aaPredicted RBP13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 MAP4K1Q92918 833 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 TRIM11Q96F44 468 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 UPF3AQ9H1J1 476 aaKnown RBP13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 POLR3EQ9NVU0 708 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 COL17A1Q9UMD9 1497 aaPredicted RBP13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 IQANK1A0A1B0GTG1 560 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 ZBED1O96006 694 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 FKBP3Q00688 224 aaKnown RBP13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 C1orf146Q5VVC0 180 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 MCTP2Q6DN12 878 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 CENPUQ71F23 418 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 LINC00301Q8NCQ3 95 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 TUBB6Q9BUF5 446 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 EDC4Q6P2E9 1401 aaKnown RBP13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 HMGB1P1B2RPK0 211 aaPredicted RBP13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 TTI1O43156 1089 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 MB21D1Q8N884 522 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 MRPL47Q9HD33 250 aaKnown RBP13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 EIF4G3O43432 1585 aaKnown RBP13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 SLFN14P0C7P3 912 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 KIF23Q02241 960 aaPredicted RBP13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 CTTNQ14247 550 aaKnown RBP13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 NKX1-1Q15270 411 aaPredicted RBP13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 KRT31Q15323 416 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 ANO4Q32M45 955 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 PPP1R36Q96LQ0 422 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 DBNLQ9UJU6 430 aaKnown RBP13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 RASA4BC9J798 803 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 RASA4O43374 803 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 PMS1P54277 932 aaKnown RBP13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 MAGOHP61326 146 aaKnown RBP13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 GJB4Q9NTQ9 266 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 GTSE1Q9NYZ3 720 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 ZFP69BQ9UJL9 534 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 BCS1LQ9Y276 419 aa13.07□□□□□ -0.32
SEMA6A-202ENST00000343348 HOXA13P31271 388 aaPredicted RBP13.06□□□□□ -0.32
SEMA6A-202ENST00000343348 EPHB1P54762 984 aa13.06□□□□□ -0.32
SEMA6A-202ENST00000343348 ADCY2Q08462 1091 aa13.06□□□□□ -0.32
SEMA6A-202ENST00000343348 FLOT2Q14254 428 aa13.06□□□□□ -0.32
SEMA6A-202ENST00000343348 LRRC14Q15048 493 aa13.06□□□□□ -0.32
SEMA6A-202ENST00000343348 EPM2AIP1Q7L775 607 aaPredicted RBP13.06□□□□□ -0.32
SEMA6A-202ENST00000343348 BBS5Q8N3I7 341 aa13.06□□□□□ -0.32
SEMA6A-202ENST00000343348 PLA2G4BP0C869 781 aa13.06□□□□□ -0.32
SEMA6A-202ENST00000343348 RANBP1P43487 201 aa13.06□□□□□ -0.32
SEMA6A-202ENST00000343348 ING2Q9H160 280 aa13.06□□□□□ -0.32
SEMA6A-202ENST00000343348 LRRC4Q9HBW1 653 aa13.06□□□□□ -0.32
SEMA6A-202ENST00000343348 POLD4Q9HCU8 107 aa13.06□□□□□ -0.32
SEMA6A-202ENST00000343348 TYW5A2RUC4 315 aaKnown RBP13.06□□□□□ -0.32
SEMA6A-202ENST00000343348 MYO1CO00159 1063 aa13.06□□□□□ -0.32
SEMA6A-202ENST00000343348 HLA-DPA1P20036 260 aa13.06□□□□□ -0.32
SEMA6A-202ENST00000343348 TFDP1Q14186 410 aa13.06□□□□□ -0.32
SEMA6A-202ENST00000343348 PI16Q6UXB8 463 aa13.06□□□□□ -0.32
SEMA6A-202ENST00000343348 IL17REQ8NFR9 667 aa13.06□□□□□ -0.32
SEMA6A-202ENST00000343348 GTPBP10A4D1E9 387 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms