RNA–Protein interactions for RNA: ENST00000343258.8

VAV3-201, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene VAV3, Length 2,552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-201ENST00000343258 XIRP2A4UGR9 3374 aa5.2□□□□□ -1.58
VAV3-201ENST00000343258 REV3LO60673 3130 aa5.2□□□□□ -1.58
VAV3-201ENST00000343258 TRIM43BA6NCK2 446 aa5.2□□□□□ -1.58
VAV3-201ENST00000343258 GCOM1H8Y6P7 765 aaPredicted RBP5.2□□□□□ -1.58
VAV3-201ENST00000343258 STXBP3O00186 592 aa5.2□□□□□ -1.58
VAV3-201ENST00000343258 PQBP1O60828 265 aaKnown RBP5.2□□□□□ -1.58
VAV3-201ENST00000343258 POLR2MP0CAP2 368 aa5.2□□□□□ -1.58
VAV3-201ENST00000343258 PNMA6AP0CW24 399 aaPredicted RBP5.2□□□□□ -1.58
VAV3-201ENST00000343258 CALM1P0DP23 149 aa5.2□□□□□ -1.58
VAV3-201ENST00000343258 CALM2P0DP24 149 aa5.2□□□□□ -1.58
VAV3-201ENST00000343258 CALM3P0DP25 149 aa5.2□□□□□ -1.58
VAV3-201ENST00000343258 TXNP10599 105 aaKnown RBP5.2□□□□□ -1.58
VAV3-201ENST00000343258 LMAN1P49257 510 aa5.2□□□□□ -1.58
VAV3-201ENST00000343258 MDM2Q00987 491 aaPredicted RBP5.2□□□□□ -1.58
VAV3-201ENST00000343258 PGM5Q15124 567 aa5.2□□□□□ -1.58
VAV3-201ENST00000343258 FSCN1Q16658 493 aaKnown RBP5.2□□□□□ -1.58
VAV3-201ENST00000343258 DUSP28Q4G0W2 176 aa5.2□□□□□ -1.58
VAV3-201ENST00000343258 C1QTNF12Q5T7M4 302 aa5.2□□□□□ -1.58
VAV3-201ENST00000343258 SYNE3Q6ZMZ3 975 aa5.2□□□□□ -1.58
VAV3-201ENST00000343258 RNF180Q86T96 592 aa5.2□□□□□ -1.58
VAV3-201ENST00000343258 VSIG10LQ86VR7 867 aa5.2□□□□□ -1.58
VAV3-201ENST00000343258 NECAB1Q8N987 351 aa5.2□□□□□ -1.58
VAV3-201ENST00000343258 CYP2W1Q8TAV3 490 aa5.2□□□□□ -1.58
VAV3-201ENST00000343258 TRIM43Q96BQ3 446 aaPredicted RBP5.2□□□□□ -1.58
VAV3-201ENST00000343258 MIEF2Q96C03 454 aa5.2□□□□□ -1.58
VAV3-201ENST00000343258 FAXDC2Q96IV6 333 aa5.2□□□□□ -1.58
VAV3-201ENST00000343258 UPF3AQ9H1J1 476 aaKnown RBP5.2□□□□□ -1.58
VAV3-201ENST00000343258 VTA1Q9NP79 307 aa5.2□□□□□ -1.58
VAV3-201ENST00000343258 PDRG1Q9NUG6 133 aa5.2□□□□□ -1.58
VAV3-201ENST00000343258 SEC63Q9UGP8 760 aaKnown RBP5.2□□□□□ -1.58
VAV3-201ENST00000343258 TPCN1Q9ULQ1 816 aa5.2□□□□□ -1.58
VAV3-201ENST00000343258 LRRC37A2A6NM11 1700 aa5.2□□□□□ -1.58
VAV3-201ENST00000343258 RBM47A0AV96 593 aaKnown RBP5.19□□□□□ -1.58
VAV3-201ENST00000343258 COQ9O75208 318 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 PAX7P23759 505 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 PSMA5P28066 241 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 MAGEA10P43363 369 aaPredicted RBP5.19□□□□□ -1.58
VAV3-201ENST00000343258 GNAQP50148 359 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 AK2P54819 239 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 EVCP57679 992 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 CHMP4BP1P59074 171 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 IRX1P78414 480 aaPredicted RBP5.19□□□□□ -1.58
VAV3-201ENST00000343258 PPP2R5BQ15173 497 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 SF3A1Q15459 793 aaKnown RBP5.19□□□□□ -1.58
VAV3-201ENST00000343258 AP1ARQ63HQ0 302 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 IQSEC1Q6DN90 963 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 RASGRP4Q8TDF6 673 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 AFG1LQ8WV93 481 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 VTI1AQ96AJ9 217 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 LZTS2Q9BRK4 669 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 PSTPIP2Q9H939 334 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 PRDM5Q9NQX1 630 aaPredicted RBP5.19□□□□□ -1.58
VAV3-201ENST00000343258 ETAA1Q9NY74 926 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 CPSF2Q9P2I0 782 aaKnown RBP5.19□□□□□ -1.58
VAV3-201ENST00000343258 ANKRD33BA6NCL7 494 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 MBD3O95983 291 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 CST5P28325 142 aaPredicted RBP5.19□□□□□ -1.58
VAV3-201ENST00000343258 SMARCA1P28370 1054 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 ACTN2P35609 894 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 NAPAP54920 295 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 ARHGAP1Q07960 439 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 ST3GAL1Q11201 340 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 SCRN1Q12765 414 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 SNX17Q15036 470 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 STXBP2Q15833 593 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 TPD52L1Q16890 204 aaPredicted RBP5.19□□□□□ -1.58
VAV3-201ENST00000343258 HSDL1Q3SXM5 330 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 CEP135Q66GS9 1140 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 LEKR1Q6ZMV7 388 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 FBXL16Q8N461 479 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 OR6J1Q8NGC5 347 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 SMARCC2Q8TAQ2 1214 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 SCFD2Q8WU76 684 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 SYAP1Q96A49 352 aaPredicted RBP5.19□□□□□ -1.58
VAV3-201ENST00000343258 THOC1Q96FV9 657 aaKnown RBP5.19□□□□□ -1.58
VAV3-201ENST00000343258 SLC26A6Q9BXS9 759 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 TM6SF1Q9BZW5 370 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 TRPV6Q9H1D0 765 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 PRO3102Q9H379 93 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 STARD7Q9NQZ5 370 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 PDLIM7Q9NR12 457 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 PKD2L1Q9P0L9 805 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 VPS54Q9P1Q0 977 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 PNMA2Q9UL42 364 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 UMODL1Q5DID0 1318 aa5.19□□□□□ -1.58
VAV3-201ENST00000343258 SPTBN5Q9NRC6 3674 aaKnown RBP5.18□□□□□ -1.58
VAV3-201ENST00000343258 ATP9AO75110 1047 aa5.18□□□□□ -1.58
VAV3-201ENST00000343258 EIF3JO75822 258 aaKnown RBP5.18□□□□□ -1.58
VAV3-201ENST00000343258 CTDNEP1O95476 244 aa5.18□□□□□ -1.58
VAV3-201ENST00000343258 IVLP07476 585 aa5.18□□□□□ -1.58
VAV3-201ENST00000343258 MYL3P08590 195 aa5.18□□□□□ -1.58
VAV3-201ENST00000343258 ITGB5P18084 799 aa5.18□□□□□ -1.58
VAV3-201ENST00000343258 UBA1P22314 1058 aaKnown RBP5.18□□□□□ -1.58
VAV3-201ENST00000343258 NEK4P51957 841 aa5.18□□□□□ -1.58
VAV3-201ENST00000343258 EPHB4P54760 987 aa5.18□□□□□ -1.58
VAV3-201ENST00000343258 SP4Q02446 784 aa5.18□□□□□ -1.58
VAV3-201ENST00000343258 FAAP100Q0VG06 881 aa5.18□□□□□ -1.58
VAV3-201ENST00000343258 PSMD2Q13200 908 aa5.18□□□□□ -1.58
VAV3-201ENST00000343258 ZRSR1Q15695 479 aaKnown RBP5.18□□□□□ -1.58
VAV3-201ENST00000343258 PFKFB3Q16875 520 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms