RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 HSPA6P17066 643 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 GGCXP38435 758 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 GPSM2P81274 684 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 TTBK2Q6IQ55 1244 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 PTPN22Q9Y2R2 807 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 FAM169AQ9Y6X4 670 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 CTNND1O60716 968 aaKnown RBP7.81□□□□□ -1.16
VCAN-202ENST00000342785 GBP1P32455 592 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 CRKP46108 304 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 PPP1R18Q6NYC8 613 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 CAPN12Q6ZSI9 719 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 ADGRF4Q8IZF3 695 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 TDRD3Q9H7E2 651 aaKnown RBP7.81□□□□□ -1.16
VCAN-202ENST00000342785 PNMA2Q9UL42 364 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 NOVA2Q9UNW9 492 aaKnown RBP7.81□□□□□ -1.16
VCAN-202ENST00000342785 DIP2BQ9P265 1576 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 MROH2AA6NES4 1674 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 NOA1Q8NC60 698 aaKnown RBP7.81□□□□□ -1.16
VCAN-202ENST00000342785 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.81□□□□□ -1.16
VCAN-202ENST00000342785 RSRC1Q96IZ7 334 aaKnown RBP7.81□□□□□ -1.16
VCAN-202ENST00000342785 CEP170P1Q96L14 293 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 TRIM10Q9UDY6 481 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 DAGLAQ9Y4D2 1042 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 ADRA2BP18089 450 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 EIF2AK2P19525 551 aaKnown RBP7.81□□□□□ -1.16
VCAN-202ENST00000342785 NAA25Q14CX7 972 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 SEC23AQ15436 765 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 KNOP1Q1ED39 458 aaKnown RBP7.81□□□□□ -1.16
VCAN-202ENST00000342785 FYB2Q5VWT5 728 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 MIGA2Q7L4E1 593 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 SREK1Q8WXA9 508 aaKnown RBP7.81□□□□□ -1.16
VCAN-202ENST00000342785 SERPINA10Q9UK55 444 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 OVOS2A0A0G2JMS6 1433 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 A0A1B0GUA9 196 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 STAMBPO95630 424 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 CD44P16070 742 aaKnown RBP7.8□□□□□ -1.16
VCAN-202ENST00000342785 STAT3P40763 770 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 RCSD1Q6JBY9 416 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 PDXDC1Q6P996 788 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 NEK9Q8TD19 979 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 GRK7Q8WTQ7 553 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 KLHL14Q9P2G3 628 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 PPP1R21Q6ZMI0 780 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 CTAGE3PQ8IX95 158 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 ANKRD35Q8N283 1001 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 DCAF4Q8WV16 495 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 FMO2Q99518 471 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 C7orf25Q9BPX7 421 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 DDX47Q9H0S4 455 aaKnown RBP7.8□□□□□ -1.16
VCAN-202ENST00000342785 RAB20Q9NX57 234 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 SNX12Q9UMY4 172 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 MYMKA6NI61 221 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 NAALADL2Q58DX5 795 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 CDAN1Q8IWY9 1227 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 GOLGA8IPA6NC78 632 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 GOLGA8JA6NMD2 632 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 ATF2P15336 505 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 KLRK1P26718 216 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 SLCO1A2P46721 670 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 DCAF15Q66K64 600 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 CCDC89Q8N998 374 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 TYW1Q9NV66 732 aaKnown RBP7.8□□□□□ -1.16
VCAN-202ENST00000342785 MAPK4P31152 587 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 ZNF543Q08ER8 600 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 ZMYND12Q9H0C1 365 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 KMT5AQ9NQR1 393 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 FAM217BQ9NTX9 383 aaPredicted RBP7.8□□□□□ -1.16
VCAN-202ENST00000342785 PACSIN2Q9UNF0 486 aaPredicted RBP7.8□□□□□ -1.16
VCAN-202ENST00000342785 SNX24Q9Y343 169 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 SALL1Q9NSC2 1324 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 PLEKHG2Q9H7P9 1386 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 POLGP54098 1239 aaPredicted RBP7.8□□□□□ -1.16
VCAN-202ENST00000342785 CUL1Q13616 776 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 EFCAB13Q8IY85 973 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 TAB3Q8N5C8 712 aaPredicted RBP7.8□□□□□ -1.16
VCAN-202ENST00000342785 PPFIBP2Q8ND30 876 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 SLC7A3Q8WY07 619 aa7.8□□□□□ -1.16
VCAN-202ENST00000342785 STXBP3O00186 592 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 IRX3P78415 501 aaPredicted RBP7.79□□□□□ -1.16
VCAN-202ENST00000342785 SGO2Q562F6 1265 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 ANKRD20A3Q5VUR7 823 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 RHOT2Q8IXI1 618 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 ANKFY1Q9P2R3 1169 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 FLT1P17948 1338 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 ECEL1O95672 775 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 USP11P51784 963 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 DR1Q01658 176 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 BFSP1Q12934 665 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 P3H4Q92791 437 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 LRRC1Q9BTT6 524 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 GCLMP48507 274 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 ATP11AP98196 1134 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 FAM160B2Q86V87 743 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 GLYCTKQ8IVS8 523 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 ZBTB8OSQ8IWT0 167 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 TBC1D16Q8TBP0 767 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 MASTLQ96GX5 879 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 ZNF185O15231 689 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 TMEM191BP0C7N4 346 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 TMOD1P28289 359 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms