RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 TTLL4Q14679 1199 aa16.2■□□□□ 0.18
UBE3B-202ENST00000342494 MCPH1Q8NEM0 835 aa16.2■□□□□ 0.18
UBE3B-202ENST00000342494 STRBPQ96SI9 672 aaKnown RBP16.2■□□□□ 0.18
UBE3B-202ENST00000342494 ADGRL3Q9HAR2 1447 aa16.2■□□□□ 0.18
UBE3B-202ENST00000342494 FAM196BA6NMK8 535 aa16.2■□□□□ 0.18
UBE3B-202ENST00000342494 CCNE1P24864 410 aa16.2■□□□□ 0.18
UBE3B-202ENST00000342494 RECQLP46063 649 aaPredicted RBP16.2■□□□□ 0.18
UBE3B-202ENST00000342494 STX1BP61266 288 aa16.2■□□□□ 0.18
UBE3B-202ENST00000342494 IRX4P78413 519 aa16.2■□□□□ 0.18
UBE3B-202ENST00000342494 LRRC8AQ8IWT6 810 aa16.2■□□□□ 0.18
UBE3B-202ENST00000342494 SDCCAG3Q96C92 435 aa16.2■□□□□ 0.18
UBE3B-202ENST00000342494 HVCN1Q96D96 273 aa16.2■□□□□ 0.18
UBE3B-202ENST00000342494 TLK1Q9UKI8 766 aa16.2■□□□□ 0.18
UBE3B-202ENST00000342494 PLEKHA8P1O95397 391 aa16.2■□□□□ 0.18
UBE3B-202ENST00000342494 CYP2D6P10635 497 aa16.2■□□□□ 0.18
UBE3B-202ENST00000342494 TNFAIP2Q03169 654 aa16.2■□□□□ 0.18
UBE3B-202ENST00000342494 LLGL1Q15334 1064 aa16.2■□□□□ 0.18
UBE3B-202ENST00000342494 CLDN3O15551 220 aa16.2■□□□□ 0.18
UBE3B-202ENST00000342494 RWDD4Q6NW29 188 aaKnown RBP16.2■□□□□ 0.18
UBE3B-202ENST00000342494 PCDHB6Q9Y5E3 794 aa16.2■□□□□ 0.18
UBE3B-202ENST00000342494 ARHGEF5Q12774 1597 aa16.19■□□□□ 0.18
UBE3B-202ENST00000342494 ECEL1O95672 775 aa16.19■□□□□ 0.18
UBE3B-202ENST00000342494 CYP2E1P05181 493 aaPredicted RBP16.19■□□□□ 0.18
UBE3B-202ENST00000342494 CCDC38Q502W7 563 aa16.19■□□□□ 0.18
UBE3B-202ENST00000342494 LINC00301Q8NCQ3 95 aa16.19■□□□□ 0.18
UBE3B-202ENST00000342494 MYRIPQ8NFW9 859 aa16.19■□□□□ 0.18
UBE3B-202ENST00000342494 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.19■□□□□ 0.18
UBE3B-202ENST00000342494 NUDCD1Q96RS6 583 aa16.19■□□□□ 0.18
UBE3B-202ENST00000342494 RASSF4Q9H2L5 321 aa16.19■□□□□ 0.18
UBE3B-202ENST00000342494 DAAM1Q9Y4D1 1078 aa16.19■□□□□ 0.18
UBE3B-202ENST00000342494 KPNA2P52292 529 aaKnown RBP16.19■□□□□ 0.18
UBE3B-202ENST00000342494 TXNRD1Q16881 649 aa16.19■□□□□ 0.18
UBE3B-202ENST00000342494 URGCPQ8TCY9 931 aa16.19■□□□□ 0.18
UBE3B-202ENST00000342494 TTC25Q96NG3 672 aa16.19■□□□□ 0.18
UBE3B-202ENST00000342494 SH3GLB2Q9NR46 395 aa16.19■□□□□ 0.18
UBE3B-202ENST00000342494 MAN1B1Q9UKM7 699 aa16.19■□□□□ 0.18
UBE3B-202ENST00000342494 SRPRBQ9Y5M8 271 aaKnown RBP16.19■□□□□ 0.18
UBE3B-202ENST00000342494 HOXA7P31268 230 aaPredicted RBP16.19■□□□□ 0.18
UBE3B-202ENST00000342494 GNGT1P63211 74 aa16.19■□□□□ 0.18
UBE3B-202ENST00000342494 EN1Q05925 392 aaPredicted RBP16.19■□□□□ 0.18
UBE3B-202ENST00000342494 ERICH1Q86X53 443 aa16.19■□□□□ 0.18
UBE3B-202ENST00000342494 SCN4BQ8IWT1 228 aa16.19■□□□□ 0.18
UBE3B-202ENST00000342494 PIGOQ8TEQ8 1089 aa16.19■□□□□ 0.18
UBE3B-202ENST00000342494 RWDD2AQ9UIY3 292 aa16.19■□□□□ 0.18
UBE3B-202ENST00000342494 ERVK-7P63135 1459 aa16.19■□□□□ 0.18
UBE3B-202ENST00000342494 MYO5CQ9NQX4 1742 aa16.19■□□□□ 0.18
UBE3B-202ENST00000342494 SFI1A8K8P3 1242 aa16.19■□□□□ 0.18
UBE3B-202ENST00000342494 ATP1A2P50993 1020 aa16.19■□□□□ 0.18
UBE3B-202ENST00000342494 TMED8Q6PL24 325 aaPredicted RBP16.19■□□□□ 0.18
UBE3B-202ENST00000342494 TBC1D22BQ9NU19 505 aa16.19■□□□□ 0.18
UBE3B-202ENST00000342494 TSPY1Q01534 308 aa16.18■□□□□ 0.18
UBE3B-202ENST00000342494 RBL2Q08999 1139 aa16.18■□□□□ 0.18
UBE3B-202ENST00000342494 SLC12A1Q13621 1099 aa16.18■□□□□ 0.18
UBE3B-202ENST00000342494 CELF1Q92879 486 aaKnown RBP16.18■□□□□ 0.18
UBE3B-202ENST00000342494 FAM114A2Q9NRY5 505 aa16.18■□□□□ 0.18
UBE3B-202ENST00000342494 JRKLQ9Y4A0 524 aa16.18■□□□□ 0.18
UBE3B-202ENST00000342494 USH1CQ9Y6N9 552 aa16.18■□□□□ 0.18
UBE3B-202ENST00000342494 KIF3CO14782 793 aa16.18■□□□□ 0.18
UBE3B-202ENST00000342494 PMLP29590 882 aa16.18■□□□□ 0.18
UBE3B-202ENST00000342494 SOX5P35711 763 aa16.18■□□□□ 0.18
UBE3B-202ENST00000342494 CDO1Q16878 200 aa16.18■□□□□ 0.18
UBE3B-202ENST00000342494 FASTKD5Q7L8L6 764 aaKnown RBP16.18■□□□□ 0.18
UBE3B-202ENST00000342494 MMP19Q99542 508 aa16.18■□□□□ 0.18
UBE3B-202ENST00000342494 PHLPP2Q6ZVD8 1323 aa16.18■□□□□ 0.18
UBE3B-202ENST00000342494 GOLGA8QA0A0J9YX86 632 aa16.18■□□□□ 0.18
UBE3B-202ENST00000342494 GOLGA8OA6NCC3 632 aa16.18■□□□□ 0.18
UBE3B-202ENST00000342494 GOLGA8NF8WBI6 632 aa16.18■□□□□ 0.18
UBE3B-202ENST00000342494 ARL6IP4Q66PJ3 421 aaKnown RBP16.18■□□□□ 0.18
UBE3B-202ENST00000342494 GBP7Q8N8V2 638 aaPredicted RBP16.18■□□□□ 0.18
UBE3B-202ENST00000342494 GJD4Q96KN9 370 aaPredicted RBP16.18■□□□□ 0.18
UBE3B-202ENST00000342494 HINFPQ9BQA5 517 aa16.18■□□□□ 0.18
UBE3B-202ENST00000342494 MOSPD1Q9UJG1 213 aa16.18■□□□□ 0.18
UBE3B-202ENST00000342494 SART1O43290 800 aaKnown RBP16.18■□□□□ 0.18
UBE3B-202ENST00000342494 HUS1O60921 280 aa16.18■□□□□ 0.18
UBE3B-202ENST00000342494 PPARGP37231 505 aaPredicted RBP16.18■□□□□ 0.18
UBE3B-202ENST00000342494 DPCR1Q3MIW9 517 aa16.18■□□□□ 0.18
UBE3B-202ENST00000342494 RCSD1Q6JBY9 416 aa16.18■□□□□ 0.18
UBE3B-202ENST00000342494 CYP4F22Q6NT55 531 aa16.18■□□□□ 0.18
UBE3B-202ENST00000342494 PPP4R3CPQ6ZMV5 832 aa16.18■□□□□ 0.18
UBE3B-202ENST00000342494 FCER1AP12319 257 aa16.18■□□□□ 0.18
UBE3B-202ENST00000342494 PHLDB3Q6NSJ2 640 aa16.18■□□□□ 0.18
UBE3B-202ENST00000342494 TMEM47Q9BQJ4 181 aa16.18■□□□□ 0.18
UBE3B-202ENST00000342494 DONSONQ9NYP3 566 aa16.18■□□□□ 0.18
UBE3B-202ENST00000342494 A0A1B0GUA9 196 aa16.17■□□□□ 0.18
UBE3B-202ENST00000342494 ENC1O14682 589 aa16.17■□□□□ 0.18
UBE3B-202ENST00000342494 MSH2P43246 934 aa16.17■□□□□ 0.18
UBE3B-202ENST00000342494 PRELPP51888 382 aa16.17■□□□□ 0.18
UBE3B-202ENST00000342494 KRT76Q01546 638 aa16.17■□□□□ 0.18
UBE3B-202ENST00000342494 SKIV2LQ15477 1246 aaKnown RBP16.17■□□□□ 0.18
UBE3B-202ENST00000342494 BANK1Q8NDB2 785 aa16.17■□□□□ 0.18
UBE3B-202ENST00000342494 NGRNQ9NPE2 291 aaKnown RBP16.17■□□□□ 0.18
UBE3B-202ENST00000342494 OVOS2A0A0G2JMS6 1433 aa16.17■□□□□ 0.18
UBE3B-202ENST00000342494 OVOS2A0A0J9YW53 1432 aa16.17■□□□□ 0.18
UBE3B-202ENST00000342494 OVOS2Q6IE36 1432 aa16.17■□□□□ 0.18
UBE3B-202ENST00000342494 UTYO14607 1347 aa16.17■□□□□ 0.18
UBE3B-202ENST00000342494 GOLGA8FQ08AF8 430 aa16.17■□□□□ 0.18
UBE3B-202ENST00000342494 GOLGA8DPQ0D2H9 430 aa16.17■□□□□ 0.18
UBE3B-202ENST00000342494 ZNF568Q3ZCX4 644 aa16.17■□□□□ 0.18
UBE3B-202ENST00000342494 LRGUKQ96M69 825 aa16.17■□□□□ 0.18
UBE3B-202ENST00000342494 THAP9Q9H5L6 903 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms