RNA–Protein interactions for RNA: ENST00000341329.7

RHBDD1-201, Transcript of rhomboid domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD1, Length 4,883 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-201ENST00000341329 Q9H521 79 aa13.04□□□□□ -0.32
RHBDD1-201ENST00000341329 TAF1DQ9H5J8 278 aaPredicted RBP13.04□□□□□ -0.32
RHBDD1-201ENST00000341329 SNX12Q9UMY4 172 aa13.04□□□□□ -0.32
RHBDD1-201ENST00000341329 SCINQ9Y6U3 715 aa13.04□□□□□ -0.32
RHBDD1-201ENST00000341329 DIP2AQ14689 1571 aa13.04□□□□□ -0.32
RHBDD1-201ENST00000341329 IPO5O00410 1097 aaKnown RBP13.04□□□□□ -0.32
RHBDD1-201ENST00000341329 ATP5HO75947 161 aa13.04□□□□□ -0.32
RHBDD1-201ENST00000341329 KRT19P08727 400 aa13.04□□□□□ -0.32
RHBDD1-201ENST00000341329 USP11P51784 963 aa13.04□□□□□ -0.32
RHBDD1-201ENST00000341329 COASYQ13057 564 aa13.04□□□□□ -0.32
RHBDD1-201ENST00000341329 MAP7Q14244 749 aa13.04□□□□□ -0.32
RHBDD1-201ENST00000341329 NAA30Q147X3 362 aaPredicted RBP13.04□□□□□ -0.32
RHBDD1-201ENST00000341329 SURF1Q15526 300 aa13.04□□□□□ -0.32
RHBDD1-201ENST00000341329 TBC1D9BQ66K14 1250 aa13.04□□□□□ -0.32
RHBDD1-201ENST00000341329 TTC19Q6DKK2 380 aaPredicted RBP13.04□□□□□ -0.32
RHBDD1-201ENST00000341329 SMC1BQ8NDV3 1235 aa13.04□□□□□ -0.32
RHBDD1-201ENST00000341329 NEDD1Q8NHV4 660 aa13.04□□□□□ -0.32
RHBDD1-201ENST00000341329 FBXO41Q8TF61 875 aa13.04□□□□□ -0.32
RHBDD1-201ENST00000341329 KLHL29Q96CT2 875 aa13.04□□□□□ -0.32
RHBDD1-201ENST00000341329 PSMD1Q99460 953 aa13.04□□□□□ -0.32
RHBDD1-201ENST00000341329 UBE2TQ9NPD8 197 aaPredicted RBP13.04□□□□□ -0.32
RHBDD1-201ENST00000341329 ADAMTS13Q76LX8 1427 aa13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 PDS5AQ29RF7 1337 aaKnown RBP13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 GOLGA8QA0A0J9YX86 632 aa13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 GOLGA8OA6NCC3 632 aa13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 GOLGA8NF8WBI6 632 aa13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 KIF3CO14782 793 aa13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 SLC7A5Q01650 507 aa13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 SCARF1Q14162 830 aa13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 PDXDC1Q6P996 788 aa13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 KIAA0825Q8IV33 1275 aa13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 MICAL1Q8TDZ2 1067 aa13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 SERPINB2P05120 415 aa13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 TMEM191BP0C7N4 346 aa13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 ANTXR2P58335 489 aa13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 SH2D4BQ5SQS7 431 aa13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 FRMD5Q7Z6J6 570 aa13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 KMT5AQ9NQR1 393 aa13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 NARFQ9UHQ1 456 aa13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 MROH7-TTC4A0A0A0MT08 1334 aa13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 PREX1Q8TCU6 1659 aa13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 FGGP02679 453 aa13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 SMARCA1P28370 1054 aa13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 POLGP54098 1239 aaPredicted RBP13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 KNOP1Q1ED39 458 aaKnown RBP13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 BRINP3Q76B58 766 aa13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 SERPINA10Q9UK55 444 aa13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 ODF2LQ9ULJ1 636 aa13.03□□□□□ -0.32
RHBDD1-201ENST00000341329 CHUKO15111 745 aa13.02□□□□□ -0.32
RHBDD1-201ENST00000341329 KCNH2Q12809 1159 aa13.02□□□□□ -0.32
RHBDD1-201ENST00000341329 TACO1Q9BSH4 297 aaKnown RBP13.02□□□□□ -0.32
RHBDD1-201ENST00000341329 KIAA1586Q9HCI6 787 aa13.02□□□□□ -0.32
RHBDD1-201ENST00000341329 CLIC2O15247 247 aa13.02□□□□□ -0.32
RHBDD1-201ENST00000341329 NR3C1P04150 777 aa13.02□□□□□ -0.32
RHBDD1-201ENST00000341329 INHBAP08476 426 aa13.02□□□□□ -0.32
RHBDD1-201ENST00000341329 CHRNA3P32297 505 aa13.02□□□□□ -0.32
RHBDD1-201ENST00000341329 GARSP41250 739 aaKnown RBP13.02□□□□□ -0.32
RHBDD1-201ENST00000341329 TFDP1Q14186 410 aa13.02□□□□□ -0.32
RHBDD1-201ENST00000341329 SPATA4Q8NEY3 305 aa13.02□□□□□ -0.32
RHBDD1-201ENST00000341329 GBP5Q96PP8 586 aa13.02□□□□□ -0.32
RHBDD1-201ENST00000341329 SUGT1Q9Y2Z0 365 aa13.02□□□□□ -0.32
RHBDD1-201ENST00000341329 COL15A1P39059 1388 aa13.02□□□□□ -0.33
RHBDD1-201ENST00000341329 FOXN1O15353 648 aa13.02□□□□□ -0.33
RHBDD1-201ENST00000341329 VPS41P49754 854 aa13.02□□□□□ -0.33
RHBDD1-201ENST00000341329 CASC4Q6P4E1 433 aa13.02□□□□□ -0.33
RHBDD1-201ENST00000341329 CNPY4Q8N129 248 aa13.02□□□□□ -0.33
RHBDD1-201ENST00000341329 SH3RF3Q8TEJ3 882 aaPredicted RBP13.02□□□□□ -0.33
RHBDD1-201ENST00000341329 CCT6BQ92526 530 aa13.02□□□□□ -0.33
RHBDD1-201ENST00000341329 ATP6V1G3Q96LB4 118 aa13.02□□□□□ -0.33
RHBDD1-201ENST00000341329 AGXT2Q9BYV1 514 aa13.02□□□□□ -0.33
RHBDD1-201ENST00000341329 TRIM9Q9C026 710 aa13.02□□□□□ -0.33
RHBDD1-201ENST00000341329 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.02□□□□□ -0.33
RHBDD1-201ENST00000341329 FMR1Q06787 632 aaKnown RBP eCLIP13.02□□□□□ -0.335e-9■■■■■ 31.9
RHBDD1-201ENST00000341329 PDIA6Q15084 440 aa13.02□□□□□ -0.33
RHBDD1-201ENST00000341329 DIXDC1Q155Q3 683 aa13.02□□□□□ -0.33
RHBDD1-201ENST00000341329 HESX1Q9UBX0 185 aa13.02□□□□□ -0.33
RHBDD1-201ENST00000341329 PTPN22Q9Y2R2 807 aa13.02□□□□□ -0.33
RHBDD1-201ENST00000341329 MED7O43513 233 aa13.01□□□□□ -0.33
RHBDD1-201ENST00000341329 DHX34Q14147 1143 aaKnown RBP13.01□□□□□ -0.33
RHBDD1-201ENST00000341329 RASA3Q14644 834 aa13.01□□□□□ -0.33
RHBDD1-201ENST00000341329 PTPROQ16827 1216 aa13.01□□□□□ -0.33
RHBDD1-201ENST00000341329 BHMT2Q9H2M3 363 aa13.01□□□□□ -0.33
RHBDD1-201ENST00000341329 DNAJC12Q9UKB3 198 aa13.01□□□□□ -0.33
RHBDD1-201ENST00000341329 PCDHB4Q9Y5E5 795 aa13.01□□□□□ -0.33
RHBDD1-201ENST00000341329 GMNCA6NCL1 334 aa13.01□□□□□ -0.33
RHBDD1-201ENST00000341329 IFNAR2P48551 515 aa13.01□□□□□ -0.33
RHBDD1-201ENST00000341329 GPC5P78333 572 aa13.01□□□□□ -0.33
RHBDD1-201ENST00000341329 UBE2SQ16763 222 aa13.01□□□□□ -0.33
RHBDD1-201ENST00000341329 ICE2Q659A1 982 aa13.01□□□□□ -0.33
RHBDD1-201ENST00000341329 GLG1Q92896 1179 aa13.01□□□□□ -0.33
RHBDD1-201ENST00000341329 TRIM6Q9C030 488 aaPredicted RBP13.01□□□□□ -0.33
RHBDD1-201ENST00000341329 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.01□□□□□ -0.33
RHBDD1-201ENST00000341329 HGSO14964 777 aaPredicted RBP13.01□□□□□ -0.33
RHBDD1-201ENST00000341329 SRGAP2O75044 1071 aa13.01□□□□□ -0.33
RHBDD1-201ENST00000341329 CASP1P29466 404 aa13.01□□□□□ -0.33
RHBDD1-201ENST00000341329 SLC16A2P36021 539 aa13.01□□□□□ -0.33
RHBDD1-201ENST00000341329 VSNL1P62760 191 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms