RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 MYBP10242 640 aa22.17■■□□□ 1.14
SPG7-202ENST00000341316 POLD1P28340 1107 aa22.17■■□□□ 1.14
SPG7-202ENST00000341316 ZSCAN26Q16670 478 aa22.17■■□□□ 1.14
SPG7-202ENST00000341316 MIGA2Q7L4E1 593 aa22.17■■□□□ 1.14
SPG7-202ENST00000341316 EPM2AIP1Q7L775 607 aaPredicted RBP22.17■■□□□ 1.14
SPG7-202ENST00000341316 SECISBP2LQ93073 1101 aaKnown RBP22.17■■□□□ 1.14
SPG7-202ENST00000341316 CAPZA3Q96KX2 299 aa22.17■■□□□ 1.14
SPG7-202ENST00000341316 LSM14BQ9BX40 385 aaKnown RBP22.17■■□□□ 1.14
SPG7-202ENST00000341316 TMEM39BQ9GZU3 492 aa22.17■■□□□ 1.14
SPG7-202ENST00000341316 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.17■■□□□ 1.14
SPG7-202ENST00000341316 CAPN6Q9Y6Q1 641 aa22.17■■□□□ 1.14
SPG7-202ENST00000341316 ZNF185O15231 689 aa22.17■■□□□ 1.14
SPG7-202ENST00000341316 AKR1B10O60218 316 aa22.17■■□□□ 1.14
SPG7-202ENST00000341316 GNA14O95837 355 aa22.17■■□□□ 1.14
SPG7-202ENST00000341316 UBXN2AP68543 259 aa22.17■■□□□ 1.14
SPG7-202ENST00000341316 CASP8Q14790 479 aa22.17■■□□□ 1.14
SPG7-202ENST00000341316 MSL3Q8N5Y2 521 aaKnown RBP22.17■■□□□ 1.14
SPG7-202ENST00000341316 ZFP91Q96JP5 570 aaPredicted RBP22.17■■□□□ 1.14
SPG7-202ENST00000341316 GLIS2Q9BZE0 524 aaPredicted RBP22.17■■□□□ 1.14
SPG7-202ENST00000341316 DEF6Q9H4E7 631 aa22.17■■□□□ 1.14
SPG7-202ENST00000341316 SH2D4AQ9H788 454 aa22.17■■□□□ 1.14
SPG7-202ENST00000341316 VEZTQ9HBM0 779 aa22.17■■□□□ 1.14
SPG7-202ENST00000341316 STK32BQ9NY57 414 aa22.17■■□□□ 1.14
SPG7-202ENST00000341316 GFPT1Q06210 699 aaPredicted RBP22.16■■□□□ 1.14
SPG7-202ENST00000341316 EDRF1Q3B7T1 1238 aa22.16■■□□□ 1.14
SPG7-202ENST00000341316 SPDYE2Q495Y8 402 aa22.16■■□□□ 1.14
SPG7-202ENST00000341316 LARGE2Q8N3Y3 721 aa22.16■■□□□ 1.14
SPG7-202ENST00000341316 EDEM3Q9BZQ6 932 aa22.16■■□□□ 1.14
SPG7-202ENST00000341316 TSGA10Q9BZW7 698 aa22.16■■□□□ 1.14
SPG7-202ENST00000341316 GBP3Q9H0R5 595 aa22.16■■□□□ 1.14
SPG7-202ENST00000341316 GOPCQ9HD26 462 aa22.16■■□□□ 1.14
SPG7-202ENST00000341316 PSME4Q14997 1843 aa22.16■■□□□ 1.14
SPG7-202ENST00000341316 PRPF6O94906 941 aaKnown RBP22.15■■□□□ 1.14
SPG7-202ENST00000341316 NR2F2P24468 414 aa22.15■■□□□ 1.14
SPG7-202ENST00000341316 TTLL6Q8N841 843 aa22.15■■□□□ 1.14
SPG7-202ENST00000341316 POLR3CQ9BUI4 534 aaPredicted RBP22.15■■□□□ 1.14
SPG7-202ENST00000341316 CEP72Q9P209 647 aa22.15■■□□□ 1.14
SPG7-202ENST00000341316 PDE2AO00408 941 aaPredicted RBP22.15■■□□□ 1.14
SPG7-202ENST00000341316 MOCS3O95396 460 aa22.15■■□□□ 1.14
SPG7-202ENST00000341316 CAPN2P17655 700 aa22.15■■□□□ 1.14
SPG7-202ENST00000341316 POLR2FP61218 127 aaKnown RBP22.15■■□□□ 1.14
SPG7-202ENST00000341316 CTTNQ14247 550 aaKnown RBP22.15■■□□□ 1.14
SPG7-202ENST00000341316 OTOP1Q7RTM1 612 aa22.15■■□□□ 1.14
SPG7-202ENST00000341316 RANBP17Q9H2T7 1088 aaKnown RBP22.15■■□□□ 1.14
SPG7-202ENST00000341316 FBXO28Q9NVF7 368 aa22.15■■□□□ 1.14
SPG7-202ENST00000341316 SALL4Q9UJQ4 1053 aa22.15■■□□□ 1.14
SPG7-202ENST00000341316 RGPD3A6NKT7 1758 aaPredicted RBP22.15■■□□□ 1.14
SPG7-202ENST00000341316 RGPD4Q7Z3J3 1758 aa22.15■■□□□ 1.14
SPG7-202ENST00000341316 KNOP1Q1ED39 458 aaKnown RBP22.14■■□□□ 1.14
SPG7-202ENST00000341316 SAMD1Q6SPF0 538 aaPredicted RBP22.14■■□□□ 1.14
SPG7-202ENST00000341316 AEBP2Q6ZN18 517 aaPredicted RBP22.14■■□□□ 1.14
SPG7-202ENST00000341316 PIGOQ8TEQ8 1089 aa22.14■■□□□ 1.14
SPG7-202ENST00000341316 HSD17B14Q9BPX1 270 aa22.14■■□□□ 1.14
SPG7-202ENST00000341316 TRAF3IP3Q9Y228 551 aa22.14■■□□□ 1.14
SPG7-202ENST00000341316 FAN1Q9Y2M0 1017 aa22.14■■□□□ 1.14
SPG7-202ENST00000341316 ANO9A1A5B4 782 aa22.14■■□□□ 1.13
SPG7-202ENST00000341316 ZBTB39O15060 712 aa22.14■■□□□ 1.13
SPG7-202ENST00000341316 CETN3O15182 167 aa22.14■■□□□ 1.13
SPG7-202ENST00000341316 KCNA1Q09470 495 aa22.14■■□□□ 1.13
SPG7-202ENST00000341316 MAPK8IP2Q13387 824 aaPredicted RBP22.14■■□□□ 1.13
SPG7-202ENST00000341316 PPP4R3CPQ6ZMV5 832 aa22.14■■□□□ 1.13
SPG7-202ENST00000341316 OGFOD1Q8N543 542 aa22.14■■□□□ 1.13
SPG7-202ENST00000341316 CHMP2AO43633 222 aa22.13■■□□□ 1.13
SPG7-202ENST00000341316 USO1O60763 962 aaKnown RBP22.13■■□□□ 1.13
SPG7-202ENST00000341316 PSMD10O75832 226 aa22.13■■□□□ 1.13
SPG7-202ENST00000341316 EYA4O95677 639 aa22.13■■□□□ 1.13
SPG7-202ENST00000341316 KCNA3P22001 575 aa22.13■■□□□ 1.13
SPG7-202ENST00000341316 MAGEA1P43355 309 aa22.13■■□□□ 1.13
SPG7-202ENST00000341316 KCNH2Q12809 1159 aa22.13■■□□□ 1.13
SPG7-202ENST00000341316 ANKRD13CQ8N6S4 541 aa22.13■■□□□ 1.13
SPG7-202ENST00000341316 PSMD1Q99460 953 aa22.13■■□□□ 1.13
SPG7-202ENST00000341316 VCPKMTQ9H867 229 aa22.13■■□□□ 1.13
SPG7-202ENST00000341316 RNF216Q9NWF9 866 aaPredicted RBP22.13■■□□□ 1.13
SPG7-202ENST00000341316 HDAC9Q9UKV0 1011 aa22.13■■□□□ 1.13
SPG7-202ENST00000341316 RABGAP1Q9Y3P9 1069 aa22.13■■□□□ 1.13
SPG7-202ENST00000341316 SFI1A8K8P3 1242 aa22.13■■□□□ 1.13
SPG7-202ENST00000341316 GCOM1H8Y6P7 765 aaPredicted RBP22.13■■□□□ 1.13
SPG7-202ENST00000341316 SLITRK3O94933 977 aa22.13■■□□□ 1.13
SPG7-202ENST00000341316 TUBBP07437 444 aa22.13■■□□□ 1.13
SPG7-202ENST00000341316 POLR2MP0CAP2 368 aa22.13■■□□□ 1.13
SPG7-202ENST00000341316 WDR93Q6P2C0 686 aa22.13■■□□□ 1.13
SPG7-202ENST00000341316 RTKN2Q8IZC4 609 aa22.13■■□□□ 1.13
SPG7-202ENST00000341316 GOLGA5Q8TBA6 731 aa22.13■■□□□ 1.13
SPG7-202ENST00000341316 DRC1Q96MC2 740 aa22.13■■□□□ 1.13
SPG7-202ENST00000341316 JADE2Q9NQC1 790 aa22.13■■□□□ 1.13
SPG7-202ENST00000341316 SCAF8Q9UPN6 1271 aaKnown RBP22.13■■□□□ 1.13
SPG7-202ENST00000341316 SSU72P8A0A1W2PR75 194 aa22.12■■□□□ 1.13
SPG7-202ENST00000341316 LRRIQ3A6PVS8 624 aaPredicted RBP22.12■■□□□ 1.13
SPG7-202ENST00000341316 SFMBT2Q5VUG0 894 aa22.12■■□□□ 1.13
SPG7-202ENST00000341316 RINT1Q6NUQ1 792 aa22.12■■□□□ 1.13
SPG7-202ENST00000341316 CCDC102AQ96A19 550 aa22.12■■□□□ 1.13
SPG7-202ENST00000341316 DYDC2Q96IM9 177 aa22.12■■□□□ 1.13
SPG7-202ENST00000341316 GANQ9H2C0 597 aa22.12■■□□□ 1.13
SPG7-202ENST00000341316 IKZF4Q9H2S9 585 aa22.12■■□□□ 1.13
SPG7-202ENST00000341316 FAM184BQ9ULE4 1060 aa22.12■■□□□ 1.13
SPG7-202ENST00000341316 STK24Q9Y6E0 443 aa22.12■■□□□ 1.13
SPG7-202ENST00000341316 TDRD12Q587J7 1177 aaKnown RBP22.11■■□□□ 1.13
SPG7-202ENST00000341316 LRCH2Q5VUJ6 765 aa22.11■■□□□ 1.13
SPG7-202ENST00000341316 DPY19L2P1Q6NXN4 242 aa22.11■■□□□ 1.13
SPG7-202ENST00000341316 ARHGAP27Q6ZUM4 889 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms