RNA–Protein interactions for RNA: ENST00000340729.9

CLPB-202, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-202ENST00000340729 HLTFQ14527 1009 aaKnown RBP eCLIP22.66■■□□□ 1.22
CLPB-202ENST00000340729 MEX3CQ5U5Q3 659 aaKnown RBP22.66■■□□□ 1.22
CLPB-202ENST00000340729 PPP1R18Q6NYC8 613 aa22.66■■□□□ 1.22
CLPB-202ENST00000340729 CCDC13Q8IYE1 715 aa22.66■■□□□ 1.22
CLPB-202ENST00000340729 FAM133AQ8N9E0 248 aa22.66■■□□□ 1.22
CLPB-202ENST00000340729 NYXQ9GZU5 481 aa22.66■■□□□ 1.22
CLPB-202ENST00000340729 NT5C3AQ9H0P0 336 aa22.66■■□□□ 1.22
CLPB-202ENST00000340729 KCTD10Q9H3F6 313 aa22.66■■□□□ 1.22
CLPB-202ENST00000340729 CDK5RAP2Q96SN8 1893 aa22.65■■□□□ 1.22
CLPB-202ENST00000340729 MYH4Q9Y623 1939 aa22.65■■□□□ 1.22
CLPB-202ENST00000340729 AFF2P51816 1311 aa22.65■■□□□ 1.22
CLPB-202ENST00000340729 PGRMC1O00264 195 aaKnown RBP22.65■■□□□ 1.22
CLPB-202ENST00000340729 ERCC3P19447 782 aa22.65■■□□□ 1.22
CLPB-202ENST00000340729 DNA2P51530 1060 aa22.65■■□□□ 1.22
CLPB-202ENST00000340729 TXNRD3Q86VQ6 643 aa22.65■■□□□ 1.22
CLPB-202ENST00000340729 CCDC65Q8IXS2 484 aa22.65■■□□□ 1.22
CLPB-202ENST00000340729 SEC14L1Q92503 715 aa22.65■■□□□ 1.22
CLPB-202ENST00000340729 NLRP3Q96P20 1036 aa22.65■■□□□ 1.22
CLPB-202ENST00000340729 MAP2K2P36507 400 aa22.64■■□□□ 1.22
CLPB-202ENST00000340729 IFT88Q13099 833 aa22.64■■□□□ 1.22
CLPB-202ENST00000340729 SPDYCQ5MJ68 293 aa22.64■■□□□ 1.22
CLPB-202ENST00000340729 RASGEF1CQ8N431 466 aa22.64■■□□□ 1.22
CLPB-202ENST00000340729 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.64■■□□□ 1.224e-6■■■■□ 22.3
CLPB-202ENST00000340729 SLITRK6Q9H5Y7 841 aa22.64■■□□□ 1.22
CLPB-202ENST00000340729 ZPR1O75312 459 aa22.64■■□□□ 1.21
CLPB-202ENST00000340729 CTNNA1P35221 906 aaKnown RBP22.64■■□□□ 1.21
CLPB-202ENST00000340729 ECM1Q16610 540 aa22.64■■□□□ 1.21
CLPB-202ENST00000340729 RNF187Q5TA31 235 aaPredicted RBP22.64■■□□□ 1.21
CLPB-202ENST00000340729 DPY19L2P1Q6NXN4 242 aa22.64■■□□□ 1.21
CLPB-202ENST00000340729 IRF2BP2Q7Z5L9 587 aa22.64■■□□□ 1.21
CLPB-202ENST00000340729 TAX1BP1Q86VP1 789 aa22.64■■□□□ 1.21
CLPB-202ENST00000340729 P3H4Q92791 437 aa22.64■■□□□ 1.21
CLPB-202ENST00000340729 KLC4Q9NSK0 619 aa22.64■■□□□ 1.21
CLPB-202ENST00000340729 NENFQ9UMX5 172 aa22.64■■□□□ 1.21
CLPB-202ENST00000340729 A0A0A6YYK5 440 aaPredicted RBP22.63■■□□□ 1.21
CLPB-202ENST00000340729 PRKCIP41743 596 aa22.63■■□□□ 1.21
CLPB-202ENST00000340729 SLFN11Q7Z7L1 901 aa22.63■■□□□ 1.21
CLPB-202ENST00000340729 CCDC24Q8N4L8 307 aa22.63■■□□□ 1.21
CLPB-202ENST00000340729 SART1O43290 800 aaKnown RBP22.62■■□□□ 1.21
CLPB-202ENST00000340729 PPP2R2AP63151 447 aa22.62■■□□□ 1.21
CLPB-202ENST00000340729 PTK2Q05397 1052 aa22.62■■□□□ 1.21
CLPB-202ENST00000340729 CCDC121Q6ZUS5 278 aa22.62■■□□□ 1.21
CLPB-202ENST00000340729 POLD4Q9HCU8 107 aa22.62■■□□□ 1.21
CLPB-202ENST00000340729 PLIN4Q96Q06 1357 aa22.62■■□□□ 1.21
CLPB-202ENST00000340729 GOLGA6L7A0A1B0GV03 622 aa22.62■■□□□ 1.21
CLPB-202ENST00000340729 GCFC2P16383 781 aaKnown RBP22.62■■□□□ 1.21
CLPB-202ENST00000340729 HPDP32754 393 aaPredicted RBP22.62■■□□□ 1.21
CLPB-202ENST00000340729 HSPA1LP34931 641 aa22.62■■□□□ 1.21
CLPB-202ENST00000340729 RNASE9P60153 205 aaKnown RBP22.62■■□□□ 1.21
CLPB-202ENST00000340729 ASPRV1Q53RT3 343 aa22.62■■□□□ 1.21
CLPB-202ENST00000340729 LMBR1Q8WVP7 490 aa22.62■■□□□ 1.21
CLPB-202ENST00000340729 HAS1Q92839 578 aa22.62■■□□□ 1.21
CLPB-202ENST00000340729 CEP95Q96GE4 821 aa22.62■■□□□ 1.21
CLPB-202ENST00000340729 RTFDC1Q9BY42 306 aaPredicted RBP22.62■■□□□ 1.21
CLPB-202ENST00000340729 VAT1LQ9HCJ6 419 aa22.62■■□□□ 1.21
CLPB-202ENST00000340729 DDX20Q9UHI6 824 aaKnown RBP22.62■■□□□ 1.21
CLPB-202ENST00000340729 FBXL5Q9UKA1 691 aa22.62■■□□□ 1.21
CLPB-202ENST00000340729 INTUQ9ULD6 942 aa22.62■■□□□ 1.21
CLPB-202ENST00000340729 FRMD3A2A2Y4 597 aa22.61■■□□□ 1.21
CLPB-202ENST00000340729 CEP104O60308 925 aa22.61■■□□□ 1.21
CLPB-202ENST00000340729 EPS15P42566 896 aa22.61■■□□□ 1.21
CLPB-202ENST00000340729 NPEPPSP55786 919 aa22.61■■□□□ 1.21
CLPB-202ENST00000340729 KCNH2Q12809 1159 aa22.61■■□□□ 1.21
CLPB-202ENST00000340729 ZNF571Q7Z3V5 609 aaPredicted RBP22.61■■□□□ 1.21
CLPB-202ENST00000340729 MAPKAPK5Q8IW41 473 aa22.61■■□□□ 1.21
CLPB-202ENST00000340729 TPCN2Q8NHX9 752 aa22.61■■□□□ 1.21
CLPB-202ENST00000340729 SCFD1Q8WVM8 642 aa22.61■■□□□ 1.21
CLPB-202ENST00000340729 PPANQ9NQ55 473 aaKnown RBP22.61■■□□□ 1.21
CLPB-202ENST00000340729 SUCLA2Q9P2R7 463 aaPredicted RBP22.61■■□□□ 1.21
CLPB-202ENST00000340729 NAGPAQ9UK23 515 aa22.61■■□□□ 1.21
CLPB-202ENST00000340729 JAG2Q9Y219 1238 aa22.61■■□□□ 1.21
CLPB-202ENST00000340729 RTCBQ9Y3I0 505 aaKnown RBP22.61■■□□□ 1.21
CLPB-202ENST00000340729 NOC2LQ9Y3T9 749 aaKnown RBP22.61■■□□□ 1.21
CLPB-202ENST00000340729 MYH7BA7E2Y1 1941 aa22.61■■□□□ 1.21
CLPB-202ENST00000340729 CETN3O15182 167 aa22.61■■□□□ 1.21
CLPB-202ENST00000340729 PDHBP11177 359 aa22.61■■□□□ 1.21
CLPB-202ENST00000340729 CLK2P49760 499 aaKnown RBP22.61■■□□□ 1.21
CLPB-202ENST00000340729 ARID5AQ03989 594 aa22.61■■□□□ 1.21
CLPB-202ENST00000340729 FRMD5Q7Z6J6 570 aa22.61■■□□□ 1.21
CLPB-202ENST00000340729 ARHGEF1Q92888 912 aaKnown RBP22.61■■□□□ 1.21
CLPB-202ENST00000340729 NAP1L4Q99733 375 aaKnown RBP22.61■■□□□ 1.21
CLPB-202ENST00000340729 STXBP5LQ9Y2K9 1186 aa22.61■■□□□ 1.21
CLPB-202ENST00000340729 PITPNM2Q9BZ72 1349 aa22.6■■□□□ 1.21
CLPB-202ENST00000340729 UBR3Q6ZT12 1888 aa22.6■■□□□ 1.21
CLPB-202ENST00000340729 USP17L5A8MUK1 530 aa22.6■■□□□ 1.21
CLPB-202ENST00000340729 ADAM9Q13443 819 aa22.6■■□□□ 1.21
CLPB-202ENST00000340729 DIXDC1Q155Q3 683 aa22.6■■□□□ 1.21
CLPB-202ENST00000340729 LACTB2Q53H82 288 aaPredicted RBP22.6■■□□□ 1.21
CLPB-202ENST00000340729 METTL13Q8N6R0 699 aa22.6■■□□□ 1.21
CLPB-202ENST00000340729 CCDC26Q8TAB7 109 aa22.6■■□□□ 1.21
CLPB-202ENST00000340729 SETDB2Q96T68 719 aa22.6■■□□□ 1.21
CLPB-202ENST00000340729 FGFBP2Q9BYJ0 223 aa22.6■■□□□ 1.21
CLPB-202ENST00000340729 NEUROG2Q9H2A3 272 aa22.6■■□□□ 1.21
CLPB-202ENST00000340729 CXorf56Q9H5V9 222 aa22.6■■□□□ 1.21
CLPB-202ENST00000340729 SLC40A1Q9NP59 571 aa22.6■■□□□ 1.21
CLPB-202ENST00000340729 EMILIN3Q9NT22 766 aa22.6■■□□□ 1.21
CLPB-202ENST00000340729 DDX25Q9UHL0 483 aaKnown RBP22.6■■□□□ 1.21
CLPB-202ENST00000340729 SAP30BPQ9UHR5 308 aaKnown RBP22.6■■□□□ 1.21
CLPB-202ENST00000340729 TTC7AQ9ULT0 858 aaPredicted RBP22.6■■□□□ 1.21
CLPB-202ENST00000340729 FLOT1O75955 427 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms