RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 KRT79Q5XKE5 535 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 GBP6Q6ZN66 633 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 ZNF571Q7Z3V5 609 aaPredicted RBP13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 CNBD1Q8NA66 436 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 MYCBPAPQ8TBZ2 947 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 ANKS1AQ92625 1134 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 AKT1S1Q96B36 256 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 MAGEF1Q9HAY2 307 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 AMACRQ9UHK6 382 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 TMCO5BA8MYB1 307 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 F8W031 263 aaPredicted RBP13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 MARCH6O60337 910 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 HSD17B3P37058 310 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 FNTAP49354 379 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 ITGB3BPQ13352 177 aaPredicted RBP13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 HERC4Q5GLZ8 1057 aaPredicted RBP13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 UBAP2Q5T6F2 1119 aaKnown RBP13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 PRR5LQ6MZQ0 368 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 NLRP14Q86W24 1093 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 TEX11Q8IYF3 940 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 USP38Q8NB14 1042 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 ATP6V1G3Q96LB4 118 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 RTFDC1Q9BY42 306 aaPredicted RBP13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 DPH5Q9H2P9 285 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 CEP72Q9P209 647 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 CNOT8Q9UFF9 292 aaKnown RBP13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 NR2E1Q9Y466 385 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 USP17L15C9J2P7 530 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 USP17L13C9JLJ4 530 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 USP17L11C9JVI0 530 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 USP17L18D6R9N7 530 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 USP17L22D6RA61 530 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 USP17L17D6RBQ6 530 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 USP17L19D6RCP7 530 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 USP17L20D6RJB6 530 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 SERPING1P05155 500 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 PDHBP11177 359 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 LRRC63Q05C16 580 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 USP17L24Q0WX57 530 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 SLC18A3Q16572 532 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 GALNT17Q6IS24 598 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 USP17L6PQ6QN14 398 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 KDM7AQ6ZMT4 941 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 SCFD1Q8WVM8 642 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 TSG101Q99816 390 aa13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 JPH2Q9BR39 696 aaPredicted RBP13.11□□□□□ -0.31
CCDC144CP-201ENST00000340196 POTEFA5A3E0 1075 aa13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 MEFVO15553 781 aaPredicted RBP13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 POTEIP0CG38 1075 aa13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 SNAP25P60880 206 aa13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 FKBP3Q00688 224 aaKnown RBP13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 KCNA1Q09470 495 aa13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 CRY2Q49AN0 593 aa13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 DCAF17Q5H9S7 520 aaPredicted RBP13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 POTEGQ6S5H5 508 aa13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 POTEEQ6S8J3 1075 aa13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 KCTD1Q719H9 257 aa13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 RBM46Q8TBY0 533 aaKnown RBP13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 UBLCP1Q8WVY7 318 aaPredicted RBP13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 ANKRD2Q9GZV1 360 aa13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 EPN3Q9H201 632 aa13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 UTRNP46939 3433 aa13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 PVALEFA0A1B0GWK0 134 aa13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 SSU72P8A0A1W2PR75 194 aa13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 DAPK3O43293 454 aa13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 KIF1CO43896 1103 aaKnown RBP13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 KIAA0754O94854 1291 aa13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 APBA3O96018 575 aa13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 MDH1P40925 334 aaKnown RBP13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 ADCY7P51828 1080 aa13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 PSMC6P62333 389 aa13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 TMEM266Q2M3C6 531 aa13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 MDM1Q8TC05 714 aa13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 CEP89Q96ST8 783 aa13.1□□□□□ -0.31
CCDC144CP-201ENST00000340196 IRS2Q9Y4H2 1338 aa13.09□□□□□ -0.31
CCDC144CP-201ENST00000340196 RBAK-RBAKDNI3L0D1 243 aa13.09□□□□□ -0.31
CCDC144CP-201ENST00000340196 EPS15P42566 896 aa13.09□□□□□ -0.31
CCDC144CP-201ENST00000340196 ACTN3Q08043 901 aaPredicted RBP13.09□□□□□ -0.31
CCDC144CP-201ENST00000340196 KCNH2Q12809 1159 aa13.09□□□□□ -0.31
CCDC144CP-201ENST00000340196 SF3B2Q13435 895 aaKnown RBP13.09□□□□□ -0.31
CCDC144CP-201ENST00000340196 ADAM9Q13443 819 aa13.09□□□□□ -0.31
CCDC144CP-201ENST00000340196 CDC37Q16543 378 aaPredicted RBP13.09□□□□□ -0.31
CCDC144CP-201ENST00000340196 GPBP1Q86WP2 473 aa13.09□□□□□ -0.31
CCDC144CP-201ENST00000340196 RNF217Q8TC41 542 aa13.09□□□□□ -0.31
CCDC144CP-201ENST00000340196 TRIM51Q9BSJ1 452 aa13.09□□□□□ -0.31
CCDC144CP-201ENST00000340196 DDX25Q9UHL0 483 aaKnown RBP13.09□□□□□ -0.31
CCDC144CP-201ENST00000340196 FBXL5Q9UKA1 691 aa13.09□□□□□ -0.31
CCDC144CP-201ENST00000340196 PCDHGC5Q9Y5F6 944 aa13.09□□□□□ -0.31
CCDC144CP-201ENST00000340196 SERPINB2P05120 415 aa13.09□□□□□ -0.31
CCDC144CP-201ENST00000340196 AKR1B1P15121 316 aa13.09□□□□□ -0.31
CCDC144CP-201ENST00000340196 CTNNA1P35221 906 aaKnown RBP13.09□□□□□ -0.31
CCDC144CP-201ENST00000340196 FXR2P51116 673 aaKnown RBP eCLIP13.09□□□□□ -0.31
CCDC144CP-201ENST00000340196 ASIC2Q16515 512 aa13.09□□□□□ -0.31
CCDC144CP-201ENST00000340196 TMEM119Q4V9L6 283 aa13.09□□□□□ -0.31
CCDC144CP-201ENST00000340196 TCERG1LQ5VWI1 586 aa13.09□□□□□ -0.31
CCDC144CP-201ENST00000340196 SPTY2D1Q68D10 685 aaPredicted RBP13.09□□□□□ -0.31
CCDC144CP-201ENST00000340196 TRIM59Q8IWR1 403 aa13.09□□□□□ -0.31
CCDC144CP-201ENST00000340196 METTL13Q8N6R0 699 aa13.09□□□□□ -0.31
CCDC144CP-201ENST00000340196 GANQ9H2C0 597 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms