RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 ATP2C1P98194 919 aaPredicted RBP18.83■□□□□ 0.61
SFN-201ENST00000339276 SF3A1Q15459 793 aaKnown RBP18.83■□□□□ 0.61
SFN-201ENST00000339276 UGCGQ16739 394 aa18.83■□□□□ 0.61
SFN-201ENST00000339276 FAM160B1Q5W0V3 765 aa18.83■□□□□ 0.61
SFN-201ENST00000339276 NFRKBQ6P4R8 1299 aa18.83■□□□□ 0.61
SFN-201ENST00000339276 PLPPR4Q7Z2D5 763 aa18.83■□□□□ 0.61
SFN-201ENST00000339276 RDM1Q8NG50 284 aa18.83■□□□□ 0.61
SFN-201ENST00000339276 AFAP1L1Q8TED9 768 aa18.83■□□□□ 0.61
SFN-201ENST00000339276 HDAC6Q9UBN7 1215 aa18.83■□□□□ 0.61
SFN-201ENST00000339276 CLIC4Q9Y696 253 aa18.83■□□□□ 0.61
SFN-201ENST00000339276 MYH9P35579 1960 aaKnown RBP18.82■□□□□ 0.6
SFN-201ENST00000339276 LAD1O00515 517 aa18.82■□□□□ 0.6
SFN-201ENST00000339276 SMIM10L2AP0DMW4 78 aa18.82■□□□□ 0.6
SFN-201ENST00000339276 SMIM10L2BP0DMW5 78 aa18.82■□□□□ 0.6
SFN-201ENST00000339276 DDIT3P35638 169 aa18.82■□□□□ 0.6
SFN-201ENST00000339276 TECP42680 631 aa18.82■□□□□ 0.6
SFN-201ENST00000339276 TLE2Q04725 743 aa18.82■□□□□ 0.6
SFN-201ENST00000339276 FOXD4L6Q3SYB3 417 aaPredicted RBP18.82■□□□□ 0.6
SFN-201ENST00000339276 PDXDC2PQ6P474 469 aa18.82■□□□□ 0.6
SFN-201ENST00000339276 FOXD4L3Q6VB84 417 aaPredicted RBP18.82■□□□□ 0.6
SFN-201ENST00000339276 FAM126BQ8IXS8 530 aa18.82■□□□□ 0.6
SFN-201ENST00000339276 C7orf31Q8N865 590 aa18.82■□□□□ 0.6
SFN-201ENST00000339276 USP28Q96RU2 1077 aa18.82■□□□□ 0.6
SFN-201ENST00000339276 MAFBQ9Y5Q3 323 aaPredicted RBP18.82■□□□□ 0.6
SFN-201ENST00000339276 PRPHP41219 470 aa18.81■□□□□ 0.6
SFN-201ENST00000339276 CEBPZQ03701 1054 aaKnown RBP18.81■□□□□ 0.6
SFN-201ENST00000339276 HIC1Q14526 733 aa18.81■□□□□ 0.6
SFN-201ENST00000339276 PLCB4Q15147 1175 aa18.81■□□□□ 0.6
SFN-201ENST00000339276 IL17AQ16552 155 aa18.81■□□□□ 0.6
SFN-201ENST00000339276 ANKRD33Q7Z3H0 272 aa18.81■□□□□ 0.6
SFN-201ENST00000339276 SESTD1Q86VW0 696 aa18.81■□□□□ 0.6
SFN-201ENST00000339276 C7orf61Q8IZ16 206 aa18.81■□□□□ 0.6
SFN-201ENST00000339276 BANK1Q8NDB2 785 aa18.81■□□□□ 0.6
SFN-201ENST00000339276 DPF3Q92784 378 aa18.81■□□□□ 0.6
SFN-201ENST00000339276 TRMT13Q9NUP7 481 aaKnown RBP18.81■□□□□ 0.6
SFN-201ENST00000339276 DAXXQ9UER7 740 aaPredicted RBP18.81■□□□□ 0.6
SFN-201ENST00000339276 MROH7Q68CQ1 1323 aa18.81■□□□□ 0.6
SFN-201ENST00000339276 ZNF862O60290 1169 aa18.8■□□□□ 0.6
SFN-201ENST00000339276 B4GALT4O60513 344 aa18.8■□□□□ 0.6
SFN-201ENST00000339276 ATP4AP20648 1035 aa18.8■□□□□ 0.6
SFN-201ENST00000339276 FXR2P51116 673 aaKnown RBP eCLIP18.8■□□□□ 0.6
SFN-201ENST00000339276 PTPN11Q06124 597 aaPredicted RBP18.8■□□□□ 0.6
SFN-201ENST00000339276 EPHA7Q15375 998 aa18.8■□□□□ 0.6
SFN-201ENST00000339276 TMEM266Q2M3C6 531 aa18.8■□□□□ 0.6
SFN-201ENST00000339276 GDF6Q6KF10 455 aaPredicted RBP18.8■□□□□ 0.6
SFN-201ENST00000339276 SEZ6LQ9BYH1 1024 aa18.8■□□□□ 0.6
SFN-201ENST00000339276 TRPV6Q9H1D0 765 aa18.8■□□□□ 0.6
SFN-201ENST00000339276 GTF2IRD1Q9UHL9 959 aa18.8■□□□□ 0.6
SFN-201ENST00000339276 TRPC6Q9Y210 931 aa18.8■□□□□ 0.6
SFN-201ENST00000339276 EVI5O60447 810 aa18.79■□□□□ 0.6
SFN-201ENST00000339276 BMP15O95972 392 aa18.79■□□□□ 0.6
SFN-201ENST00000339276 SLC26A2P50443 739 aa18.79■□□□□ 0.6
SFN-201ENST00000339276 ZNF200P98182 395 aaPredicted RBP18.79■□□□□ 0.6
SFN-201ENST00000339276 MLLT1Q03111 559 aaPredicted RBP18.79■□□□□ 0.6
SFN-201ENST00000339276 FAAP100Q0VG06 881 aa18.79■□□□□ 0.6
SFN-201ENST00000339276 PTPAQ15257 358 aa18.79■□□□□ 0.6
SFN-201ENST00000339276 TRMT1LQ7Z2T5 733 aaKnown RBP18.79■□□□□ 0.6
SFN-201ENST00000339276 CKAP2LQ8IYA6 745 aa18.79■□□□□ 0.6
SFN-201ENST00000339276 ATP8B4Q8TF62 1192 aa18.79■□□□□ 0.6
SFN-201ENST00000339276 DYDC2Q96IM9 177 aa18.79■□□□□ 0.6
SFN-201ENST00000339276 TOX2Q96NM4 488 aa18.79■□□□□ 0.6
SFN-201ENST00000339276 EIF2AK1Q9BQI3 630 aaKnown RBP18.79■□□□□ 0.6
SFN-201ENST00000339276 SETD4Q9NVD3 440 aa18.79■□□□□ 0.6
SFN-201ENST00000339276 RGL1Q9NZL6 768 aa18.79■□□□□ 0.6
SFN-201ENST00000339276 WRAP73Q9P2S5 460 aaPredicted RBP18.79■□□□□ 0.6
SFN-201ENST00000339276 CEP131Q9UPN4 1083 aa18.79■□□□□ 0.6
SFN-201ENST00000339276 TNRC18O15417 2968 aaPredicted RBP18.79■□□□□ 0.6
SFN-201ENST00000339276 TRIP12Q14669 1992 aaPredicted RBP18.79■□□□□ 0.6
SFN-201ENST00000339276 POTEB3A0JP26 581 aa18.78■□□□□ 0.6
SFN-201ENST00000339276 C17orf102A2RUQ5 167 aa18.78■□□□□ 0.6
SFN-201ENST00000339276 DCDC2CA8MYV0 355 aa18.78■□□□□ 0.6
SFN-201ENST00000339276 CD4P01730 458 aa18.78■□□□□ 0.6
SFN-201ENST00000339276 HOXC8P31273 242 aa18.78■□□□□ 0.6
SFN-201ENST00000339276 PRKCEQ02156 737 aa18.78■□□□□ 0.6
SFN-201ENST00000339276 CYP4A11Q02928 519 aa18.78■□□□□ 0.6
SFN-201ENST00000339276 PPFIA1Q13136 1202 aa18.78■□□□□ 0.6
SFN-201ENST00000339276 POTEBQ6S5H4 581 aa18.78■□□□□ 0.6
SFN-201ENST00000339276 DTHD1Q6ZMT9 781 aa18.78■□□□□ 0.6
SFN-201ENST00000339276 IGSF22Q8N9C0 903 aa18.78■□□□□ 0.6
SFN-201ENST00000339276 LMBR1Q8WVP7 490 aa18.78■□□□□ 0.6
SFN-201ENST00000339276 ATP6V0A1Q93050 837 aa18.78■□□□□ 0.6
SFN-201ENST00000339276 ZNF396Q96N95 335 aaPredicted RBP18.78■□□□□ 0.6
SFN-201ENST00000339276 PCDH10Q9P2E7 1040 aa18.78■□□□□ 0.6
SFN-201ENST00000339276 TFIP11Q9UBB9 837 aaKnown RBP18.78■□□□□ 0.6
SFN-201ENST00000339276 VWA3AA6NCI4 1184 aa18.77■□□□□ 0.6
SFN-201ENST00000339276 TLR3O15455 904 aaKnown RBP18.77■□□□□ 0.6
SFN-201ENST00000339276 OATP04181 439 aa18.77■□□□□ 0.6
SFN-201ENST00000339276 P4HBP07237 508 aaKnown RBP18.77■□□□□ 0.6
SFN-201ENST00000339276 CLTBP09497 229 aa18.77■□□□□ 0.6
SFN-201ENST00000339276 INSRRP14616 1297 aa18.77■□□□□ 0.6
SFN-201ENST00000339276 QARSP47897 775 aaKnown RBP18.77■□□□□ 0.6
SFN-201ENST00000339276 PSMC5P62195 406 aa18.77■□□□□ 0.6
SFN-201ENST00000339276 CTTNQ14247 550 aaKnown RBP18.77■□□□□ 0.6
SFN-201ENST00000339276 GRIK4Q16099 956 aa18.77■□□□□ 0.6
SFN-201ENST00000339276 PTGISQ16647 500 aa18.77■□□□□ 0.6
SFN-201ENST00000339276 ARL6IP4Q66PJ3 421 aaKnown RBP18.77■□□□□ 0.6
SFN-201ENST00000339276 SH3RF1Q7Z6J0 888 aa18.77■□□□□ 0.6
SFN-201ENST00000339276 TRAPPC12Q8WVT3 735 aa18.77■□□□□ 0.6
SFN-201ENST00000339276 CTAGE1Q96RT6 745 aa18.77■□□□□ 0.6
SFN-201ENST00000339276 LXNQ9BS40 222 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms