RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 CHN1P15882 459 aa22.25■■□□□ 1.15
RUNX3-202ENST00000338888 ZNF317Q96PQ6 595 aaPredicted RBP22.25■■□□□ 1.15
RUNX3-202ENST00000338888 SELENOSQ9BQE4 189 aa22.25■■□□□ 1.15
RUNX3-202ENST00000338888 BARHL2Q9NY43 387 aa22.25■■□□□ 1.15
RUNX3-202ENST00000338888 ASIC2Q16515 512 aa22.24■■□□□ 1.15
RUNX3-202ENST00000338888 SUSD4Q5VX71 490 aa22.24■■□□□ 1.15
RUNX3-202ENST00000338888 TLCD1Q96CP7 247 aa22.24■■□□□ 1.15
RUNX3-202ENST00000338888 CALR3Q96L12 384 aaKnown RBP22.24■■□□□ 1.15
RUNX3-202ENST00000338888 DCP1AQ9NPI6 582 aaPredicted RBP22.24■■□□□ 1.15
RUNX3-202ENST00000338888 DLEC1Q9Y238 1755 aa22.24■■□□□ 1.15
RUNX3-202ENST00000338888 CICQ96RK0 1608 aaPredicted RBP22.24■■□□□ 1.15
RUNX3-202ENST00000338888 NRAPQ86VF7 1730 aa22.24■■□□□ 1.15
RUNX3-202ENST00000338888 DZIP3Q86Y13 1208 aaKnown RBP22.24■■□□□ 1.15
RUNX3-202ENST00000338888 LARP4BQ92615 738 aaKnown RBP22.24■■□□□ 1.15
RUNX3-202ENST00000338888 MAD2L2Q9UI95 211 aa22.24■■□□□ 1.15
RUNX3-202ENST00000338888 SLC12A4Q9UP95 1085 aa22.24■■□□□ 1.15
RUNX3-202ENST00000338888 MMEP08473 750 aa22.23■■□□□ 1.15
RUNX3-202ENST00000338888 TFAP4Q01664 338 aa22.23■■□□□ 1.15
RUNX3-202ENST00000338888 ARHGAP27Q6ZUM4 889 aa22.23■■□□□ 1.15
RUNX3-202ENST00000338888 PNMA5Q96PV4 448 aa22.23■■□□□ 1.15
RUNX3-202ENST00000338888 CPVLQ9H3G5 476 aa22.23■■□□□ 1.15
RUNX3-202ENST00000338888 DOT1LQ8TEK3 1739 aa22.23■■□□□ 1.15
RUNX3-202ENST00000338888 LRP5O75197 1615 aa22.23■■□□□ 1.15
RUNX3-202ENST00000338888 MYH1P12882 1939 aa22.23■■□□□ 1.15
RUNX3-202ENST00000338888 NONOQ15233 471 aaKnown RBP eCLIP22.23■■□□□ 1.15
RUNX3-202ENST00000338888 GALNT17Q6IS24 598 aa22.23■■□□□ 1.15
RUNX3-202ENST00000338888 CDK5RAP3Q96JB5 506 aa22.23■■□□□ 1.15
RUNX3-202ENST00000338888 ELAC2Q9BQ52 826 aaKnown RBP22.23■■□□□ 1.15
RUNX3-202ENST00000338888 IL17RBQ9NRM6 502 aa22.23■■□□□ 1.15
RUNX3-202ENST00000338888 PANK4Q9NVE7 773 aa22.23■■□□□ 1.15
RUNX3-202ENST00000338888 C15orf41Q9Y2V0 281 aa22.23■■□□□ 1.15
RUNX3-202ENST00000338888 SHBGP04278 402 aa22.22■■□□□ 1.15
RUNX3-202ENST00000338888 FKBP3Q00688 224 aaKnown RBP22.22■■□□□ 1.15
RUNX3-202ENST00000338888 PTK2Q05397 1052 aa22.22■■□□□ 1.15
RUNX3-202ENST00000338888 LRRC34Q8IZ02 419 aa22.22■■□□□ 1.15
RUNX3-202ENST00000338888 ZNF34Q8IZ26 560 aa22.22■■□□□ 1.15
RUNX3-202ENST00000338888 CENPTQ96BT3 561 aa22.22■■□□□ 1.15
RUNX3-202ENST00000338888 TLDC2A0PJX2 215 aa22.22■■□□□ 1.15
RUNX3-202ENST00000338888 CCDC188H7C350 402 aa22.22■■□□□ 1.15
RUNX3-202ENST00000338888 GOLGA8HP0CJ92 632 aa22.22■■□□□ 1.15
RUNX3-202ENST00000338888 CDC25CP30307 473 aa22.22■■□□□ 1.15
RUNX3-202ENST00000338888 CRELD2Q6UXH1 353 aaPredicted RBP22.22■■□□□ 1.15
RUNX3-202ENST00000338888 LRRC57Q8N9N7 239 aa22.22■■□□□ 1.15
RUNX3-202ENST00000338888 CCDC26Q8TAB7 109 aa22.22■■□□□ 1.15
RUNX3-202ENST00000338888 DDX12PQ92771 950 aa22.22■■□□□ 1.15
RUNX3-202ENST00000338888 SPDL1Q96EA4 605 aa22.22■■□□□ 1.15
RUNX3-202ENST00000338888 TRIM51Q9BSJ1 452 aa22.22■■□□□ 1.15
RUNX3-202ENST00000338888 RIC8AQ9NPQ8 531 aa22.22■■□□□ 1.15
RUNX3-202ENST00000338888 AIPL1Q9NZN9 384 aa22.22■■□□□ 1.15
RUNX3-202ENST00000338888 SLIT2O94813 1529 aa22.21■■□□□ 1.15
RUNX3-202ENST00000338888 GCKP35557 465 aa22.21■■□□□ 1.15
RUNX3-202ENST00000338888 NEK8Q86SG6 692 aa22.21■■□□□ 1.15
RUNX3-202ENST00000338888 AGAP11Q8TF27 550 aa22.21■■□□□ 1.15
RUNX3-202ENST00000338888 MTFR1LQ9H019 292 aa22.21■■□□□ 1.15
RUNX3-202ENST00000338888 UTP11Q9Y3A2 253 aaKnown RBP22.21■■□□□ 1.15
RUNX3-202ENST00000338888 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.21■■□□□ 1.15
RUNX3-202ENST00000338888 SMIM23A6NLE4 172 aa22.21■■□□□ 1.15
RUNX3-202ENST00000338888 GSTA1P08263 222 aa22.21■■□□□ 1.15
RUNX3-202ENST00000338888 NAPAP54920 295 aa22.21■■□□□ 1.15
RUNX3-202ENST00000338888 PIGWQ7Z7B1 504 aa22.21■■□□□ 1.15
RUNX3-202ENST00000338888 MYOCDQ8IZQ8 938 aa22.21■■□□□ 1.15
RUNX3-202ENST00000338888 AGAP1Q9UPQ3 857 aa22.21■■□□□ 1.15
RUNX3-202ENST00000338888 WNK3Q9BYP7 1800 aa22.21■■□□□ 1.15
RUNX3-202ENST00000338888 ZBTB48P10074 688 aaPredicted RBP22.2■■□□□ 1.14
RUNX3-202ENST00000338888 IRX1P78414 480 aaPredicted RBP22.2■■□□□ 1.14
RUNX3-202ENST00000338888 GRM4Q14833 912 aa22.2■■□□□ 1.14
RUNX3-202ENST00000338888 BARGINQ6ZT62 677 aa22.2■■□□□ 1.14
RUNX3-202ENST00000338888 ZNF571Q7Z3V5 609 aaPredicted RBP22.2■■□□□ 1.14
RUNX3-202ENST00000338888 PEX26Q7Z412 305 aa22.2■■□□□ 1.14
RUNX3-202ENST00000338888 GOPCQ9HD26 462 aa22.2■■□□□ 1.14
RUNX3-202ENST00000338888 TBC1D7Q9P0N9 293 aa22.2■■□□□ 1.14
RUNX3-202ENST00000338888 GGT7Q9UJ14 662 aa22.2■■□□□ 1.14
RUNX3-202ENST00000338888 COL1A1P02452 1464 aaPredicted RBP22.2■■□□□ 1.14
RUNX3-202ENST00000338888 ASAP2O43150 1006 aa22.2■■□□□ 1.14
RUNX3-202ENST00000338888 ZKSCAN8Q15776 578 aaPredicted RBP22.2■■□□□ 1.14
RUNX3-202ENST00000338888 BZW1Q7L1Q6 419 aaKnown RBP22.2■■□□□ 1.14
RUNX3-202ENST00000338888 TRPM8Q7Z2W7 1104 aa22.2■■□□□ 1.14
RUNX3-202ENST00000338888 KRT25Q7Z3Z0 450 aa22.2■■□□□ 1.14
RUNX3-202ENST00000338888 TBCKQ8TEA7 893 aa22.2■■□□□ 1.14
RUNX3-202ENST00000338888 SLITRK6Q9H5Y7 841 aa22.2■■□□□ 1.14
RUNX3-202ENST00000338888 FAM114A2Q9NRY5 505 aa22.2■■□□□ 1.14
RUNX3-202ENST00000338888 SAMD15Q9P1V8 674 aa22.2■■□□□ 1.14
RUNX3-202ENST00000338888 TRPC6Q9Y210 931 aa22.2■■□□□ 1.14
RUNX3-202ENST00000338888 LOC102724428A0A0B4J2F2 783 aa22.19■■□□□ 1.14
RUNX3-202ENST00000338888 SIK1P57059 783 aa22.19■■□□□ 1.14
RUNX3-202ENST00000338888 GRIK3Q13003 919 aa22.19■■□□□ 1.14
RUNX3-202ENST00000338888 RIPK1Q13546 671 aa22.19■■□□□ 1.14
RUNX3-202ENST00000338888 KCNK18Q7Z418 384 aa22.19■■□□□ 1.14
RUNX3-202ENST00000338888 PROM2Q8N271 834 aa22.19■■□□□ 1.14
RUNX3-202ENST00000338888 LMBR1Q8WVP7 490 aa22.19■■□□□ 1.14
RUNX3-202ENST00000338888 ATXN2LQ8WWM7 1075 aaKnown RBP22.19■■□□□ 1.14
RUNX3-202ENST00000338888 FMO2Q99518 471 aa22.19■■□□□ 1.14
RUNX3-202ENST00000338888 NUDT12Q9BQG2 462 aa22.19■■□□□ 1.14
RUNX3-202ENST00000338888 MYH4Q9Y623 1939 aa22.19■■□□□ 1.14
RUNX3-202ENST00000338888 SMCO2A6NFE2 343 aa22.19■■□□□ 1.14
RUNX3-202ENST00000338888 BTNL10A8MVZ5 291 aa22.19■■□□□ 1.14
RUNX3-202ENST00000338888 VIMP08670 466 aaKnown RBP22.19■■□□□ 1.14
RUNX3-202ENST00000338888 ACTN1P12814 892 aa22.19■■□□□ 1.14
RUNX3-202ENST00000338888 GNAQP50148 359 aa22.19■■□□□ 1.14
RUNX3-202ENST00000338888 EIF3BP55884 814 aaKnown RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms