RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 AFAP1L1Q8TED9 768 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 TYW1Q9NV66 732 aaKnown RBP6.86□□□□□ -1.31
PRKDC-202ENST00000338368 RPA1P27694 616 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 NEK9Q8TD19 979 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 SLC16A10Q8TF71 515 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 C1orf112Q9NSG2 853 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 LRRN2O75325 713 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 JAK3P52333 1124 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 CAPN11Q9UMQ6 739 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 PDXKO00764 312 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 GFPT2O94808 682 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 GUCY2DQ02846 1103 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 CEP55Q53EZ4 464 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 FAM160B1Q5W0V3 765 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 MIS18BP1Q6P0N0 1132 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 ZDHHC15Q96MV8 337 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 KBTBD4Q9NVX7 518 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 ASIC3Q9UHC3 531 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 PSMD14O00487 310 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 FDX1P10109 184 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 KRT76Q01546 638 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 CLUL1Q15846 466 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 ANKS1AQ92625 1134 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 UBE2TQ9NPD8 197 aaPredicted RBP6.86□□□□□ -1.31
PRKDC-202ENST00000338368 GOLGA6CA6NDK9 693 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 FOXP2O15409 715 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 GOLGA6DP0CG33 693 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 LMNB1P20700 586 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 MFAP3P55082 362 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 ALCAMQ13740 583 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 GOLGA6AQ9NYA3 693 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 SEL1LQ9UBV2 794 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 IFT172Q9UG01 1749 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 STMN4Q9H169 189 aaPredicted RBP6.86□□□□□ -1.31
PRKDC-202ENST00000338368 DNAJC12Q9UKB3 198 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 ITIH6Q6UXX5 1313 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 DCUN1D2Q6PH85 259 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 NSUN6Q8TEA1 469 aaKnown RBP6.86□□□□□ -1.31
PRKDC-202ENST00000338368 EIF3CLB5ME19 914 aaKnown RBP6.85□□□□□ -1.31
PRKDC-202ENST00000338368 QARSP47897 775 aaKnown RBP6.85□□□□□ -1.31
PRKDC-202ENST00000338368 STXBP2Q15833 593 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 GPR162Q16538 588 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 EIF3CQ99613 913 aaKnown RBP6.85□□□□□ -1.31
PRKDC-202ENST00000338368 RNF146Q9NTX7 359 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 RNF14Q9UBS8 474 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 FAM237AA0A1B0GTK4 181 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 WDR64B1ANS9 1081 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 CXCR5P32302 372 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 REXO1L1PQ8IX06 675 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 FERMT1Q9BQL6 677 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 ANO9A1A5B4 782 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 PLSCR1O15162 318 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 METTL13Q8N6R0 699 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 LXNQ9BS40 222 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 K7ERI5 159 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 EBAG9O00559 213 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 SELENOSQ9BQE4 189 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 AGTPBP1Q9UPW5 1226 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 PADI6Q6TGC4 694 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 GCNT4Q9P109 453 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 ZMYND10O75800 440 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 DPEP1P16444 411 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 HPDP32754 393 aaPredicted RBP6.85□□□□□ -1.31
PRKDC-202ENST00000338368 IGBP1P78318 339 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 MESDQ14696 234 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 C15orf52Q6ZUT6 534 aaKnown RBP6.85□□□□□ -1.31
PRKDC-202ENST00000338368 XXYLT1Q8NBI6 393 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 MRC1P22897 1456 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 NR3C1P04150 777 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 TMEM191BP0C7N4 346 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 EVX2Q03828 476 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 NAA35Q5VZE5 725 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 RUFY4Q6ZNE9 571 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 RAB17Q9H0T7 212 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 AGPAT5Q9NUQ2 364 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 ITSN1Q15811 1721 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 NPHP3-ACAD11A0A0J9YXS1 232 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 TNNC2P02585 160 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 NMT1P30419 496 aaKnown RBP6.85□□□□□ -1.31
PRKDC-202ENST00000338368 JPH2Q9BR39 696 aaPredicted RBP6.85□□□□□ -1.31
PRKDC-202ENST00000338368 REEP2Q9BRK0 252 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 PDE11AQ9HCR9 933 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 FEZ2Q9UHY8 353 aaPredicted RBP6.85□□□□□ -1.31
PRKDC-202ENST00000338368 CYTH3O43739 400 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 SNRNP48Q6IEG0 339 aaKnown RBP6.85□□□□□ -1.31
PRKDC-202ENST00000338368 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.85□□□□□ -1.31
PRKDC-202ENST00000338368 ABCB6Q9NP58 842 aa6.85□□□□□ -1.31
PRKDC-202ENST00000338368 DDX4Q9NQI0 724 aaKnown RBP6.85□□□□□ -1.31
PRKDC-202ENST00000338368 A0A1W2PRG0 241 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 PSAPP07602 524 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 SFNP31947 248 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 SARSP49591 514 aaKnown RBP6.84□□□□□ -1.31
PRKDC-202ENST00000338368 MXI1P50539 228 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 GUCY2FP51841 1108 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 BPIFB4P59827 614 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 MTMR3Q13615 1198 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 ZRSR2Q15696 482 aaKnown RBP6.84□□□□□ -1.31
PRKDC-202ENST00000338368 HEXIM1O94992 359 aaKnown RBP6.84□□□□□ -1.31
PRKDC-202ENST00000338368 GYPCP04921 128 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 CLCN6P51797 869 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms