RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 CSPG5O95196 566 aa13.22□□□□□ -0.29
CSMD2-202ENST00000338325 KCNA2P16389 499 aa13.22□□□□□ -0.29
CSMD2-202ENST00000338325 MARK3P27448 753 aa13.22□□□□□ -0.29
CSMD2-202ENST00000338325 GTF2F1P35269 517 aaKnown RBP eCLIP13.22□□□□□ -0.29
CSMD2-202ENST00000338325 DNAJB3Q8WWF6 145 aa13.22□□□□□ -0.29
CSMD2-202ENST00000338325 SEPT1Q8WYJ6 367 aa13.22□□□□□ -0.29
CSMD2-202ENST00000338325 P2RX5Q93086 422 aa13.22□□□□□ -0.29
CSMD2-202ENST00000338325 MFSD14AQ96MC6 490 aa13.22□□□□□ -0.29
CSMD2-202ENST00000338325 MAP3K14Q99558 947 aa13.22□□□□□ -0.29
CSMD2-202ENST00000338325 ALG13Q9NP73 1137 aaKnown RBP13.22□□□□□ -0.29
CSMD2-202ENST00000338325 SEC63Q9UGP8 760 aaKnown RBP13.22□□□□□ -0.29
CSMD2-202ENST00000338325 GSTTP1A0A1W2PQM5 241 aa13.21□□□□□ -0.29
CSMD2-202ENST00000338325 STXBP3O00186 592 aa13.21□□□□□ -0.29
CSMD2-202ENST00000338325 ATP9AO75110 1047 aa13.21□□□□□ -0.29
CSMD2-202ENST00000338325 RPLP2P05387 115 aaKnown RBP13.21□□□□□ -0.29
CSMD2-202ENST00000338325 MRPS6P82932 125 aaKnown RBP13.21□□□□□ -0.29
CSMD2-202ENST00000338325 PTH1RQ03431 593 aa13.21□□□□□ -0.29
CSMD2-202ENST00000338325 ADAM15Q13444 863 aa13.21□□□□□ -0.29
CSMD2-202ENST00000338325 MARCH8Q5T0T0 291 aa13.21□□□□□ -0.29
CSMD2-202ENST00000338325 RNF135Q8IUD6 432 aa13.21□□□□□ -0.29
CSMD2-202ENST00000338325 CMTR2Q8IYT2 770 aaKnown RBP13.21□□□□□ -0.29
CSMD2-202ENST00000338325 CTCFLQ8NI51 663 aaPredicted RBP13.21□□□□□ -0.29
CSMD2-202ENST00000338325 LINC01599Q8WXQ3 324 aa13.21□□□□□ -0.29
CSMD2-202ENST00000338325 GLG1Q92896 1179 aa13.21□□□□□ -0.29
CSMD2-202ENST00000338325 PPP2R3CQ969Q6 453 aa13.21□□□□□ -0.29
CSMD2-202ENST00000338325 SMARCAD1Q9H4L7 1026 aa13.21□□□□□ -0.29
CSMD2-202ENST00000338325 PLAGL2Q9UPG8 496 aa13.21□□□□□ -0.29
CSMD2-202ENST00000338325 MRPL42Q9Y6G3 142 aaKnown RBP13.21□□□□□ -0.29
CSMD2-202ENST00000338325 TAF6LQ9Y6J9 622 aa13.21□□□□□ -0.29
CSMD2-202ENST00000338325 TRIOO75962 3097 aa13.21□□□□□ -0.3
CSMD2-202ENST00000338325 DDAH1O94760 285 aa13.2□□□□□ -0.3
CSMD2-202ENST00000338325 GSPT1P15170 499 aaKnown RBP13.2□□□□□ -0.3
CSMD2-202ENST00000338325 SMARCA1P28370 1054 aa13.2□□□□□ -0.3
CSMD2-202ENST00000338325 CD52P31358 61 aa13.2□□□□□ -0.3
CSMD2-202ENST00000338325 KIF5BP33176 963 aa13.2□□□□□ -0.3
CSMD2-202ENST00000338325 NDUFV1P49821 464 aa13.2□□□□□ -0.3
CSMD2-202ENST00000338325 ANTXR2P58335 489 aa13.2□□□□□ -0.3
CSMD2-202ENST00000338325 CAMK1Q14012 370 aa13.2□□□□□ -0.3
CSMD2-202ENST00000338325 NAALADL2Q58DX5 795 aa13.2□□□□□ -0.3
CSMD2-202ENST00000338325 NPAS4Q8IUM7 802 aa13.2□□□□□ -0.3
CSMD2-202ENST00000338325 IGDCC4Q8TDY8 1250 aa13.2□□□□□ -0.3
CSMD2-202ENST00000338325 RUFY2Q8WXA3 655 aa13.2□□□□□ -0.3
CSMD2-202ENST00000338325 MSLNLQ96KJ4 702 aa13.2□□□□□ -0.3
CSMD2-202ENST00000338325 FTHL17Q9BXU8 183 aa13.2□□□□□ -0.3
CSMD2-202ENST00000338325 AGO3Q9H9G7 860 aaKnown RBP13.2□□□□□ -0.3
CSMD2-202ENST00000338325 SQORQ9Y6N5 450 aa13.2□□□□□ -0.3
CSMD2-202ENST00000338325 FNDC1Q4ZHG4 1894 aaPredicted RBP13.2□□□□□ -0.3
CSMD2-202ENST00000338325 TECTAO75443 2155 aa13.2□□□□□ -0.3
CSMD2-202ENST00000338325 KMT2EQ8IZD2 1858 aa13.2□□□□□ -0.3
CSMD2-202ENST00000338325 RRN3P2A6NIE6 340 aa13.19□□□□□ -0.3
CSMD2-202ENST00000338325 ITGB1P05556 798 aa13.19□□□□□ -0.3
CSMD2-202ENST00000338325 ITGB5P18084 799 aa13.19□□□□□ -0.3
CSMD2-202ENST00000338325 IGBP1P78318 339 aa13.19□□□□□ -0.3
CSMD2-202ENST00000338325 MTMR1Q13613 665 aa13.19□□□□□ -0.3
CSMD2-202ENST00000338325 TTC22Q5TAA0 569 aa13.19□□□□□ -0.3
CSMD2-202ENST00000338325 IER5Q5VY09 327 aa13.19□□□□□ -0.3
CSMD2-202ENST00000338325 MB21D2Q8IYB1 491 aaPredicted RBP13.19□□□□□ -0.3
CSMD2-202ENST00000338325 ZNF654Q8IZM8 581 aa13.19□□□□□ -0.3
CSMD2-202ENST00000338325 LZTS2Q9BRK4 669 aa13.19□□□□□ -0.3
CSMD2-202ENST00000338325 MYL10Q9BUA6 226 aa13.19□□□□□ -0.3
CSMD2-202ENST00000338325 FAM49AQ9H0Q0 323 aaPredicted RBP13.19□□□□□ -0.3
CSMD2-202ENST00000338325 PKD2L1Q9P0L9 805 aa13.19□□□□□ -0.3
CSMD2-202ENST00000338325 UBIAD1Q9Y5Z9 338 aa13.19□□□□□ -0.3
CSMD2-202ENST00000338325 M0QZ92 97 aa13.18□□□□□ -0.3
CSMD2-202ENST00000338325 EYA4O95677 639 aa13.18□□□□□ -0.3
CSMD2-202ENST00000338325 STAG3L1P0CL83 205 aa13.18□□□□□ -0.3
CSMD2-202ENST00000338325 INSRRP14616 1297 aa13.18□□□□□ -0.3
CSMD2-202ENST00000338325 DNAJB1P25685 340 aa13.18□□□□□ -0.3
CSMD2-202ENST00000338325 PAN2Q504Q3 1202 aaKnown RBP13.18□□□□□ -0.3
CSMD2-202ENST00000338325 ADGRD2Q7Z7M1 963 aa13.18□□□□□ -0.3
CSMD2-202ENST00000338325 RTN4RL1Q86UN2 441 aaPredicted RBP13.18□□□□□ -0.3
CSMD2-202ENST00000338325 CRIPAKQ8N1N5 446 aa13.18□□□□□ -0.3
CSMD2-202ENST00000338325 EFHBQ8N7U6 833 aa13.18□□□□□ -0.3
CSMD2-202ENST00000338325 SPPL3Q8TCT6 385 aa13.18□□□□□ -0.3
CSMD2-202ENST00000338325 EDAQ92838 391 aa13.18□□□□□ -0.3
CSMD2-202ENST00000338325 PSTPIP2Q9H939 334 aa13.18□□□□□ -0.3
CSMD2-202ENST00000338325 LY9Q9HBG7 655 aa13.18□□□□□ -0.3
CSMD2-202ENST00000338325 TRPV2Q9Y5S1 764 aa13.18□□□□□ -0.3
CSMD2-202ENST00000338325 PLEKHA8P1O95397 391 aa13.18□□□□□ -0.3
CSMD2-202ENST00000338325 CHMLP26374 656 aa13.18□□□□□ -0.3
CSMD2-202ENST00000338325 GNAQP50148 359 aa13.18□□□□□ -0.3
CSMD2-202ENST00000338325 KLHL23Q8NBE8 558 aa13.18□□□□□ -0.3
CSMD2-202ENST00000338325 SMRP1Q8NCR6 262 aa13.18□□□□□ -0.3
CSMD2-202ENST00000338325 POF1BQ8WVV4 589 aa13.18□□□□□ -0.3
CSMD2-202ENST00000338325 ZBTB10Q96DT7 871 aa13.18□□□□□ -0.3
CSMD2-202ENST00000338325 PCYT2Q99447 389 aa13.18□□□□□ -0.3
CSMD2-202ENST00000338325 JADE2Q9NQC1 790 aa13.18□□□□□ -0.3
CSMD2-202ENST00000338325 CLEC1BQ9P126 229 aa13.18□□□□□ -0.3
CSMD2-202ENST00000338325 PADI3Q9ULW8 664 aa13.18□□□□□ -0.3
CSMD2-202ENST00000338325 TRPC6Q9Y210 931 aa13.18□□□□□ -0.3
CSMD2-202ENST00000338325 IGSF9BQ9UPX0 1349 aa13.17□□□□□ -0.3
CSMD2-202ENST00000338325 SPDYE3A6NKU9 549 aa13.17□□□□□ -0.3
CSMD2-202ENST00000338325 MAFGO15525 162 aa13.17□□□□□ -0.3
CSMD2-202ENST00000338325 SCG2P13521 617 aa13.17□□□□□ -0.3
CSMD2-202ENST00000338325 PDE4AP27815 886 aa13.17□□□□□ -0.3
CSMD2-202ENST00000338325 NRIP1P48552 1158 aa13.17□□□□□ -0.3
CSMD2-202ENST00000338325 COASYQ13057 564 aa13.17□□□□□ -0.3
CSMD2-202ENST00000338325 PAK2Q13177 524 aa13.17□□□□□ -0.3
CSMD2-202ENST00000338325 UBE2SQ16763 222 aa13.17□□□□□ -0.3
CSMD2-202ENST00000338325 CASC1Q6TDU7 716 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms