RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 SND1Q7KZF4 910 aaKnown RBP eCLIP16.35■□□□□ 0.213e-10■■■□□ 15
UBA1-201ENST00000335972 TRIM59Q8IWR1 403 aa16.35■□□□□ 0.21
UBA1-201ENST00000335972 SPATA4Q8NEY3 305 aa16.35■□□□□ 0.21
UBA1-201ENST00000335972 SELENOOQ9BVL4 669 aa16.35■□□□□ 0.21
UBA1-201ENST00000335972 TLR10Q9BXR5 811 aa16.35■□□□□ 0.21
UBA1-201ENST00000335972 GBP3Q9H0R5 595 aa16.35■□□□□ 0.21
UBA1-201ENST00000335972 DDX39AO00148 427 aaKnown RBP16.35■□□□□ 0.21
UBA1-201ENST00000335972 WDR93Q6P2C0 686 aa16.35■□□□□ 0.21
UBA1-201ENST00000335972 PODNQ7Z5L7 613 aa16.35■□□□□ 0.21
UBA1-201ENST00000335972 SH2D3AQ9BRG2 576 aa16.35■□□□□ 0.21
UBA1-201ENST00000335972 TSGA10Q9BZW7 698 aa16.35■□□□□ 0.21
UBA1-201ENST00000335972 FAM204AQ9H8W3 233 aa16.35■□□□□ 0.21
UBA1-201ENST00000335972 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.35■□□□□ 0.212e-6■■■■■ 38.7
UBA1-201ENST00000335972 RBM12Q9NTZ6 932 aaKnown RBP16.35■□□□□ 0.21
UBA1-201ENST00000335972 AJAP1Q9UKB5 411 aaPredicted RBP16.35■□□□□ 0.21
UBA1-201ENST00000335972 HDAC9Q9UKV0 1011 aa16.35■□□□□ 0.21
UBA1-201ENST00000335972 BMP3P12645 472 aa16.34■□□□□ 0.21
UBA1-201ENST00000335972 NMT1P30419 496 aaKnown RBP16.34■□□□□ 0.21
UBA1-201ENST00000335972 GGCXP38435 758 aa16.34■□□□□ 0.21
UBA1-201ENST00000335972 CDK17Q00537 523 aa16.34■□□□□ 0.21
UBA1-201ENST00000335972 SEMA3FQ13275 785 aa16.34■□□□□ 0.21
UBA1-201ENST00000335972 ALS2CR12Q96Q35 445 aa16.34■□□□□ 0.21
UBA1-201ENST00000335972 ANKRD31Q8N7Z5 1873 aa16.34■□□□□ 0.21
UBA1-201ENST00000335972 CCDC66A2RUB6 948 aa16.34■□□□□ 0.21
UBA1-201ENST00000335972 CETN3O15182 167 aa16.34■□□□□ 0.21
UBA1-201ENST00000335972 RNF40O75150 1001 aa16.34■□□□□ 0.21
UBA1-201ENST00000335972 KIAA0753Q2KHM9 967 aa16.34■□□□□ 0.21
UBA1-201ENST00000335972 ASTE1Q2TB18 679 aaPredicted RBP16.34■□□□□ 0.21
UBA1-201ENST00000335972 KLHDC7AQ5VTJ3 777 aa16.34■□□□□ 0.21
UBA1-201ENST00000335972 DCAF4Q8WV16 495 aa16.34■□□□□ 0.21
UBA1-201ENST00000335972 NYAP2Q9P242 653 aa16.34■□□□□ 0.21
UBA1-201ENST00000335972 HPCAL4Q9UM19 191 aa16.34■□□□□ 0.21
UBA1-201ENST00000335972 RAD17O75943 681 aa16.33■□□□□ 0.21
UBA1-201ENST00000335972 COG2Q14746 738 aa16.33■□□□□ 0.21
UBA1-201ENST00000335972 DNAJC21Q5F1R6 531 aaKnown RBP16.33■□□□□ 0.21
UBA1-201ENST00000335972 RBM26Q5T8P6 1007 aaKnown RBP16.33■□□□□ 0.21
UBA1-201ENST00000335972 CCNI2Q6ZMN8 369 aaPredicted RBP16.33■□□□□ 0.21
UBA1-201ENST00000335972 PRR12Q9ULL5 1215 aa16.33■□□□□ 0.21
UBA1-201ENST00000335972 ZBTB12Q9Y330 459 aaPredicted RBP16.33■□□□□ 0.21
UBA1-201ENST00000335972 SCN9AQ15858 1988 aa16.33■□□□□ 0.2
UBA1-201ENST00000335972 AKAP3O75969 853 aa16.33■□□□□ 0.2
UBA1-201ENST00000335972 USP11P51784 963 aa16.33■□□□□ 0.2
UBA1-201ENST00000335972 CEP72Q9P209 647 aa16.33■□□□□ 0.2
UBA1-201ENST00000335972 ARFGEF1Q9Y6D6 1849 aa16.33■□□□□ 0.2
UBA1-201ENST00000335972 ANO9A1A5B4 782 aa16.33■□□□□ 0.2
UBA1-201ENST00000335972 ANKRD65E5RJM6 399 aa16.33■□□□□ 0.2
UBA1-201ENST00000335972 SYF2O95926 243 aaKnown RBP16.33■□□□□ 0.2
UBA1-201ENST00000335972 TRADDQ15628 312 aa16.33■□□□□ 0.2
UBA1-201ENST00000335972 ZSCAN26Q16670 478 aa16.33■□□□□ 0.2
UBA1-201ENST00000335972 TMEM179Q6ZVK1 233 aa16.33■□□□□ 0.2
UBA1-201ENST00000335972 NOX5Q96PH1 765 aa16.33■□□□□ 0.2
UBA1-201ENST00000335972 SPAG5Q96R06 1193 aa16.33■□□□□ 0.2
UBA1-201ENST00000335972 FBXO28Q9NVF7 368 aa16.33■□□□□ 0.2
UBA1-201ENST00000335972 TTC19Q6DKK2 380 aaPredicted RBP16.32■□□□□ 0.2
UBA1-201ENST00000335972 RDH13Q8NBN7 331 aa16.32■□□□□ 0.2
UBA1-201ENST00000335972 EIF2AK1Q9BQI3 630 aaKnown RBP16.32■□□□□ 0.2
UBA1-201ENST00000335972 EHD4Q9H223 541 aa16.32■□□□□ 0.2
UBA1-201ENST00000335972 VEZTQ9HBM0 779 aa16.32■□□□□ 0.2
UBA1-201ENST00000335972 HYOU1Q9Y4L1 999 aa16.32■□□□□ 0.2
UBA1-201ENST00000335972 TMCO5BA8MYB1 307 aa16.32■□□□□ 0.2
UBA1-201ENST00000335972 C21orf2O43822 256 aa16.32■□□□□ 0.2
UBA1-201ENST00000335972 PTK2Q05397 1052 aa16.32■□□□□ 0.2
UBA1-201ENST00000335972 ASIC2Q16515 512 aa16.32■□□□□ 0.2
UBA1-201ENST00000335972 IFT81Q8WYA0 676 aa16.32■□□□□ 0.2
UBA1-201ENST00000335972 ARMCX3Q9UH62 379 aaPredicted RBP16.32■□□□□ 0.2
UBA1-201ENST00000335972 NOP2P46087 812 aaKnown RBP16.32■□□□□ 0.2
UBA1-201ENST00000335972 HYIQ5T013 277 aa16.32■□□□□ 0.2
UBA1-201ENST00000335972 STRIP1Q5VSL9 837 aa16.32■□□□□ 0.2
UBA1-201ENST00000335972 HAUS3Q68CZ6 603 aa16.32■□□□□ 0.2
UBA1-201ENST00000335972 SLFN12Q8IYM2 578 aa16.32■□□□□ 0.2
UBA1-201ENST00000335972 MKL1Q969V6 931 aa16.32■□□□□ 0.2
UBA1-201ENST00000335972 DYDC2Q96IM9 177 aa16.32■□□□□ 0.2
UBA1-201ENST00000335972 GLIS2Q9BZE0 524 aaPredicted RBP16.32■□□□□ 0.2
UBA1-201ENST00000335972 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.32■□□□□ 0.2
UBA1-201ENST00000335972 H0YIN7 160 aa16.31■□□□□ 0.2
UBA1-201ENST00000335972 SERPING1P05155 500 aa16.31■□□□□ 0.2
UBA1-201ENST00000335972 WDR18Q9BV38 432 aa16.31■□□□□ 0.2
UBA1-201ENST00000335972 FOCADQ5VW36 1801 aa16.31■□□□□ 0.2
UBA1-201ENST00000335972 YDJCA8MPS7 323 aa16.31■□□□□ 0.2
UBA1-201ENST00000335972 LTBP1Q14766 1721 aa16.31■□□□□ 0.2
UBA1-201ENST00000335972 TATDN1Q6P1N9 297 aa16.31■□□□□ 0.2
UBA1-201ENST00000335972 ZNF662Q6ZS27 426 aa16.31■□□□□ 0.2
UBA1-201ENST00000335972 TBCAO75347 108 aaKnown RBP16.31■□□□□ 0.2
UBA1-201ENST00000335972 KNOP1Q1ED39 458 aaKnown RBP16.31■□□□□ 0.2
UBA1-201ENST00000335972 ZNF571Q7Z3V5 609 aaPredicted RBP16.31■□□□□ 0.2
UBA1-201ENST00000335972 TXLNBQ8N3L3 684 aa16.31■□□□□ 0.2
UBA1-201ENST00000335972 MYCT1Q8N699 235 aa16.31■□□□□ 0.2
UBA1-201ENST00000335972 ERMNQ8TAM6 284 aa16.31■□□□□ 0.2
UBA1-201ENST00000335972 PPIP5K2O43314 1243 aa16.3■□□□□ 0.2
UBA1-201ENST00000335972 KLHL7Q8IXQ5 586 aa16.3■□□□□ 0.2
UBA1-201ENST00000335972 CEP63Q96MT8 703 aa16.3■□□□□ 0.2
UBA1-201ENST00000335972 GANQ9H2C0 597 aa16.3■□□□□ 0.2
UBA1-201ENST00000335972 RABGAP1Q9Y3P9 1069 aa16.3■□□□□ 0.2
UBA1-201ENST00000335972 RPA1P27694 616 aa16.3■□□□□ 0.2
UBA1-201ENST00000335972 DGKZQ13574 1117 aa16.3■□□□□ 0.2
UBA1-201ENST00000335972 EXOC4Q96A65 974 aa16.3■□□□□ 0.2
UBA1-201ENST00000335972 MYO3BQ8WXR4 1341 aa16.3■□□□□ 0.2
UBA1-201ENST00000335972 LCA5LO95447 670 aa16.3■□□□□ 0.2
UBA1-201ENST00000335972 NR3C1P04150 777 aa16.3■□□□□ 0.2
UBA1-201ENST00000335972 PAFAH1B1P43034 410 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms