RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 MED24O75448 989 aa15.26■□□□□ 0.03
SF1-202ENST00000334944 KRT18P05783 430 aaKnown RBP15.26■□□□□ 0.03
SF1-202ENST00000334944 GCFC2P16383 781 aaKnown RBP15.26■□□□□ 0.03
SF1-202ENST00000334944 ECE1P42892 770 aa15.26■□□□□ 0.03
SF1-202ENST00000334944 SARNPP82979 210 aaKnown RBP15.26■□□□□ 0.03
SF1-202ENST00000334944 MAP2K1Q02750 393 aaPredicted RBP15.26■□□□□ 0.03
SF1-202ENST00000334944 ARID5AQ03989 594 aa15.26■□□□□ 0.03
SF1-202ENST00000334944 SF3B2Q13435 895 aaKnown RBP15.26■□□□□ 0.03
SF1-202ENST00000334944 PREPLQ4J6C6 727 aaPredicted RBP15.26■□□□□ 0.03
SF1-202ENST00000334944 HERC4Q5GLZ8 1057 aaPredicted RBP15.26■□□□□ 0.03
SF1-202ENST00000334944 PODNQ7Z5L7 613 aa15.26■□□□□ 0.03
SF1-202ENST00000334944 GPBP1Q86WP2 473 aa15.26■□□□□ 0.03
SF1-202ENST00000334944 FAM114A1Q8IWE2 563 aa15.26■□□□□ 0.03
SF1-202ENST00000334944 DNAJC19Q96DA6 116 aa15.26■□□□□ 0.03
SF1-202ENST00000334944 MYH4Q9Y623 1939 aa15.26■□□□□ 0.03
SF1-202ENST00000334944 SCN9AQ15858 1988 aa15.26■□□□□ 0.03
SF1-202ENST00000334944 BACH1O14867 736 aa15.25■□□□□ 0.03
SF1-202ENST00000334944 NDUFB10O96000 172 aa15.25■□□□□ 0.03
SF1-202ENST00000334944 INHBEP58166 350 aa15.25■□□□□ 0.03
SF1-202ENST00000334944 ZBED6P86452 979 aa15.25■□□□□ 0.03
SF1-202ENST00000334944 PABPC4Q13310 644 aaKnown RBP eCLIP15.25■□□□□ 0.033e-10■■■■■ 38.5
SF1-202ENST00000334944 PDIA5Q14554 519 aa15.25■□□□□ 0.03
SF1-202ENST00000334944 CCDC40Q4G0X9 1142 aa15.25■□□□□ 0.03
SF1-202ENST00000334944 TMEM119Q4V9L6 283 aa15.25■□□□□ 0.03
SF1-202ENST00000334944 PPP4R3AQ6IN85 833 aa15.25■□□□□ 0.03
SF1-202ENST00000334944 NOC3LQ8WTT2 800 aaKnown RBP15.25■□□□□ 0.03
SF1-202ENST00000334944 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.25■□□□□ 0.03
SF1-202ENST00000334944 A0A1W2PRG0 241 aa15.25■□□□□ 0.03
SF1-202ENST00000334944 hCG_1984214I3L0E3 225 aa15.25■□□□□ 0.03
SF1-202ENST00000334944 MEIS2O14770 477 aa15.25■□□□□ 0.03
SF1-202ENST00000334944 ABCB5Q2M3G0 1257 aa15.25■□□□□ 0.03
SF1-202ENST00000334944 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.25■□□□□ 0.032e-12■□□□□ 10.2
SF1-202ENST00000334944 CCDC84Q86UT8 332 aaPredicted RBP15.25■□□□□ 0.03
SF1-202ENST00000334944 CDAN1Q8IWY9 1227 aa15.25■□□□□ 0.03
SF1-202ENST00000334944 ZNF713Q8N859 430 aaPredicted RBP15.25■□□□□ 0.03
SF1-202ENST00000334944 CCDC42Q96M95 316 aa15.25■□□□□ 0.03
SF1-202ENST00000334944 TRIM6Q9C030 488 aaPredicted RBP15.25■□□□□ 0.03
SF1-202ENST00000334944 PDGFDQ9GZP0 370 aaPredicted RBP15.25■□□□□ 0.03
SF1-202ENST00000334944 LRRC53A6NM62 1247 aa15.25■□□□□ 0.03
SF1-202ENST00000334944 H0YIN7 160 aa15.25■□□□□ 0.03
SF1-202ENST00000334944 PDE2AO00408 941 aaPredicted RBP15.25■□□□□ 0.03
SF1-202ENST00000334944 PLA2G4BP0C869 781 aa15.25■□□□□ 0.03
SF1-202ENST00000334944 FAM26FQ5R3K3 315 aa15.25■□□□□ 0.03
SF1-202ENST00000334944 LRRC55Q6ZSA7 311 aa15.25■□□□□ 0.03
SF1-202ENST00000334944 MYOCDQ8IZQ8 938 aa15.25■□□□□ 0.03
SF1-202ENST00000334944 TBC1D5Q92609 795 aa15.25■□□□□ 0.03
SF1-202ENST00000334944 MLXIPQ9HAP2 919 aa15.25■□□□□ 0.03
SF1-202ENST00000334944 ARHGAP20Q9P2F6 1191 aa15.25■□□□□ 0.03
SF1-202ENST00000334944 ATF5Q9Y2D1 282 aaPredicted RBP15.25■□□□□ 0.03
SF1-202ENST00000334944 IPO7O95373 1038 aaKnown RBP15.24■□□□□ 0.03
SF1-202ENST00000334944 DNA2P51530 1060 aa15.24■□□□□ 0.03
SF1-202ENST00000334944 SPRED3Q2MJR0 410 aa15.24■□□□□ 0.03
SF1-202ENST00000334944 TTMPQ5BVD1 217 aa15.24■□□□□ 0.03
SF1-202ENST00000334944 CCDC13Q8IYE1 715 aa15.24■□□□□ 0.03
SF1-202ENST00000334944 CSRNP1Q96S65 589 aa15.24■□□□□ 0.03
SF1-202ENST00000334944 SLC40A1Q9NP59 571 aa15.24■□□□□ 0.03
SF1-202ENST00000334944 SMARCAL1Q9NZC9 954 aa15.24■□□□□ 0.03
SF1-202ENST00000334944 PVALEFA0A1B0GWK0 134 aa15.24■□□□□ 0.03
SF1-202ENST00000334944 FAM86B1E9PN63 330 aa15.24■□□□□ 0.03
SF1-202ENST00000334944 OPLAHO14841 1288 aa15.24■□□□□ 0.03
SF1-202ENST00000334944 KRT14P02533 472 aa15.24■□□□□ 0.03
SF1-202ENST00000334944 FAM86B2P0C5J1 330 aa15.24■□□□□ 0.03
SF1-202ENST00000334944 EIF4A3P38919 411 aaKnown RBP15.24■□□□□ 0.03
SF1-202ENST00000334944 CASP5P51878 434 aa15.24■□□□□ 0.03
SF1-202ENST00000334944 ARHGAP4P98171 946 aa15.24■□□□□ 0.03
SF1-202ENST00000334944 KCTD19Q17RG1 926 aaPredicted RBP15.24■□□□□ 0.03
SF1-202ENST00000334944 CCNI2Q6ZMN8 369 aaPredicted RBP15.24■□□□□ 0.03
SF1-202ENST00000334944 GUF1Q8N442 669 aaKnown RBP15.24■□□□□ 0.03
SF1-202ENST00000334944 TSEN2Q8NCE0 465 aaKnown RBP15.24■□□□□ 0.03
SF1-202ENST00000334944 CCDC17Q96LX7 622 aa15.24■□□□□ 0.03
SF1-202ENST00000334944 IKZF4Q9H2S9 585 aa15.24■□□□□ 0.03
SF1-202ENST00000334944 MEA1Q16626 185 aa15.23■□□□□ 0.03
SF1-202ENST00000334944 MTMR8Q96EF0 704 aa15.23■□□□□ 0.03
SF1-202ENST00000334944 JADE2Q9NQC1 790 aa15.23■□□□□ 0.03
SF1-202ENST00000334944 SIK3Q9Y2K2 1263 aa15.23■□□□□ 0.03
SF1-202ENST00000334944 SFI1A8K8P3 1242 aa15.23■□□□□ 0.03
SF1-202ENST00000334944 RAD17O75943 681 aa15.23■□□□□ 0.03
SF1-202ENST00000334944 CYLC1P35663 651 aaPredicted RBP15.23■□□□□ 0.03
SF1-202ENST00000334944 HDLBPQ00341 1268 aaKnown RBP15.23■□□□□ 0.03
SF1-202ENST00000334944 STRIP1Q5VSL9 837 aa15.23■□□□□ 0.03
SF1-202ENST00000334944 ACER1Q8TDN7 264 aa15.23■□□□□ 0.03
SF1-202ENST00000334944 ERGIC2Q96RQ1 377 aa15.23■□□□□ 0.03
SF1-202ENST00000334944 HAUS4Q9H6D7 363 aa15.23■□□□□ 0.03
SF1-202ENST00000334944 ZBTB12Q9Y330 459 aaPredicted RBP15.23■□□□□ 0.03
SF1-202ENST00000334944 FOCADQ5VW36 1801 aa15.23■□□□□ 0.03
SF1-202ENST00000334944 CHMP2AO43633 222 aa15.23■□□□□ 0.03
SF1-202ENST00000334944 FSBPO95073 299 aa15.23■□□□□ 0.03
SF1-202ENST00000334944 CXCR5P32302 372 aa15.23■□□□□ 0.03
SF1-202ENST00000334944 KIAA1755Q5JYT7 1200 aa15.23■□□□□ 0.03
SF1-202ENST00000334944 FAM228AQ86W67 206 aa15.23■□□□□ 0.03
SF1-202ENST00000334944 TBC1D31Q96DN5 1066 aa15.23■□□□□ 0.03
SF1-202ENST00000334944 DMGDHQ9UI17 866 aaKnown RBP15.23■□□□□ 0.03
SF1-202ENST00000334944 LRRC37AA6NMS7 1700 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 YDJCA8MPS7 323 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 AKR1B10O60218 316 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 CDR1P51861 262 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 GFPT1Q06210 699 aaPredicted RBP15.22■□□□□ 0.03
SF1-202ENST00000334944 MAN2A1Q16706 1144 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 CCDC174Q6PII3 467 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 MIGA2Q7L4E1 593 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms