RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 AGPAT5Q9NUQ2 364 aa22.58■■□□□ 1.21
SPNS1-203ENST00000334536 ZBTB12Q9Y330 459 aaPredicted RBP22.58■■□□□ 1.21
SPNS1-203ENST00000334536 IGKV6D-41A0A0C4DH26 115 aa22.58■■□□□ 1.2
SPNS1-203ENST00000334536 GSTA1P08263 222 aa22.58■■□□□ 1.2
SPNS1-203ENST00000334536 HNRNPH3P31942 346 aaKnown RBP22.58■■□□□ 1.2
SPNS1-203ENST00000334536 PEX19P40855 299 aa22.58■■□□□ 1.2
SPNS1-203ENST00000334536 GABPAQ06546 454 aa22.58■■□□□ 1.2
SPNS1-203ENST00000334536 CWF19L1Q69YN2 538 aaKnown RBP22.58■■□□□ 1.2
SPNS1-203ENST00000334536 GUF1Q8N442 669 aaKnown RBP22.58■■□□□ 1.2
SPNS1-203ENST00000334536 TBC1D16Q8TBP0 767 aa22.58■■□□□ 1.2
SPNS1-203ENST00000334536 ZFAND2BQ8WV99 257 aa22.58■■□□□ 1.2
SPNS1-203ENST00000334536 CDK5RAP3Q96JB5 506 aa22.58■■□□□ 1.2
SPNS1-203ENST00000334536 PNMA5Q96PV4 448 aa22.58■■□□□ 1.2
SPNS1-203ENST00000334536 TSGA10Q9BZW7 698 aa22.58■■□□□ 1.2
SPNS1-203ENST00000334536 SEMA6BQ9H3T3 888 aa22.58■■□□□ 1.2
SPNS1-203ENST00000334536 TMEM260Q9NX78 707 aa22.58■■□□□ 1.2
SPNS1-203ENST00000334536 TRIM10Q9UDY6 481 aa22.58■■□□□ 1.2
SPNS1-203ENST00000334536 RPS6KL1Q9Y6S9 549 aa22.58■■□□□ 1.2
SPNS1-203ENST00000334536 MYO3BQ8WXR4 1341 aa22.57■■□□□ 1.2
SPNS1-203ENST00000334536 ROR2Q01974 943 aaKnown RBP22.57■■□□□ 1.2
SPNS1-203ENST00000334536 PSMD2Q13200 908 aa22.57■■□□□ 1.2
SPNS1-203ENST00000334536 TBC1D25Q3MII6 688 aa22.57■■□□□ 1.2
SPNS1-203ENST00000334536 MSL1Q68DK7 614 aa22.57■■□□□ 1.2
SPNS1-203ENST00000334536 TMC4Q7Z404 712 aa22.57■■□□□ 1.2
SPNS1-203ENST00000334536 LARP4BQ92615 738 aaKnown RBP22.57■■□□□ 1.2
SPNS1-203ENST00000334536 PCMTD1Q96MG8 357 aaPredicted RBP22.57■■□□□ 1.2
SPNS1-203ENST00000334536 CRAMP1Q96RY5 1269 aa22.57■■□□□ 1.2
SPNS1-203ENST00000334536 SERPINB2P05120 415 aa22.57■■□□□ 1.2
SPNS1-203ENST00000334536 GCLCP48506 637 aaPredicted RBP22.57■■□□□ 1.2
SPNS1-203ENST00000334536 ELF3P78545 371 aaPredicted RBP22.57■■□□□ 1.2
SPNS1-203ENST00000334536 ZIM3Q96PE6 472 aa22.57■■□□□ 1.2
SPNS1-203ENST00000334536 PURBQ96QR8 312 aaKnown RBP22.57■■□□□ 1.2
SPNS1-203ENST00000334536 DAGLAQ9Y4D2 1042 aa22.57■■□□□ 1.2
SPNS1-203ENST00000334536 FOCADQ5VW36 1801 aa22.57■■□□□ 1.2
SPNS1-203ENST00000334536 BRWD3Q6RI45 1802 aa22.57■■□□□ 1.2
SPNS1-203ENST00000334536 MYMKA6NI61 221 aa22.56■■□□□ 1.2
SPNS1-203ENST00000334536 DNM1LO00429 736 aa22.56■■□□□ 1.2
SPNS1-203ENST00000334536 ZMYND10O75800 440 aa22.56■■□□□ 1.2
SPNS1-203ENST00000334536 SETSIPP0DME0 302 aa22.56■■□□□ 1.2
SPNS1-203ENST00000334536 ATP1A2P50993 1020 aa22.56■■□□□ 1.2
SPNS1-203ENST00000334536 GUCY1A3Q02108 690 aa22.56■■□□□ 1.2
SPNS1-203ENST00000334536 LRRC63Q05C16 580 aa22.56■■□□□ 1.2
SPNS1-203ENST00000334536 VWA3BQ502W6 1294 aa22.56■■□□□ 1.2
SPNS1-203ENST00000334536 IQCKQ8N0W5 287 aa22.56■■□□□ 1.2
SPNS1-203ENST00000334536 RAD54LQ92698 747 aa22.56■■□□□ 1.2
SPNS1-203ENST00000334536 NOP53Q9NZM5 478 aaKnown RBP22.56■■□□□ 1.2
SPNS1-203ENST00000334536 POLLQ9UGP5 575 aa22.56■■□□□ 1.2
SPNS1-203ENST00000334536 PRLRP16471 622 aa22.55■■□□□ 1.2
SPNS1-203ENST00000334536 CNKSR1Q969H4 720 aa22.55■■□□□ 1.2
SPNS1-203ENST00000334536 ATP6V1G3Q96LB4 118 aa22.55■■□□□ 1.2
SPNS1-203ENST00000334536 RIC8AQ9NPQ8 531 aa22.55■■□□□ 1.2
SPNS1-203ENST00000334536 CHCHD3Q9NX63 227 aaKnown RBP22.55■■□□□ 1.2
SPNS1-203ENST00000334536 SWAP70Q9UH65 585 aa22.55■■□□□ 1.2
SPNS1-203ENST00000334536 PNMA6FA0A0J9YX94 578 aa22.55■■□□□ 1.2
SPNS1-203ENST00000334536 GMNCA6NCL1 334 aa22.55■■□□□ 1.2
SPNS1-203ENST00000334536 CFAP73A6NFT4 308 aa22.55■■□□□ 1.2
SPNS1-203ENST00000334536 E7EVH7 732 aa22.55■■□□□ 1.2
SPNS1-203ENST00000334536 ABLIM1O14639 778 aa22.55■■□□□ 1.2
SPNS1-203ENST00000334536 BLMHQ13867 455 aa22.55■■□□□ 1.2
SPNS1-203ENST00000334536 SEPT2Q15019 361 aa22.55■■□□□ 1.2
SPNS1-203ENST00000334536 MAN2A1Q16706 1144 aa22.55■■□□□ 1.2
SPNS1-203ENST00000334536 TMEM119Q4V9L6 283 aa22.55■■□□□ 1.2
SPNS1-203ENST00000334536 KRT79Q5XKE5 535 aa22.55■■□□□ 1.2
SPNS1-203ENST00000334536 TSEN2Q8NCE0 465 aaKnown RBP22.55■■□□□ 1.2
SPNS1-203ENST00000334536 ALS2CR12Q96Q35 445 aa22.55■■□□□ 1.2
SPNS1-203ENST00000334536 FRMPD2Q68DX3 1309 aaPredicted RBP22.54■■□□□ 1.2
SPNS1-203ENST00000334536 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.54■■□□□ 1.2
SPNS1-203ENST00000334536 GYS1P13807 737 aa22.54■■□□□ 1.2
SPNS1-203ENST00000334536 IBSPP21815 317 aaPredicted RBP22.54■■□□□ 1.2
SPNS1-203ENST00000334536 KLK7P49862 253 aa22.54■■□□□ 1.2
SPNS1-203ENST00000334536 VAV2P52735 878 aa22.54■■□□□ 1.2
SPNS1-203ENST00000334536 ACCSLQ4AC99 568 aa22.54■■□□□ 1.2
SPNS1-203ENST00000334536 CFAP58Q5T655 872 aa22.54■■□□□ 1.2
SPNS1-203ENST00000334536 CCDC84Q86UT8 332 aaPredicted RBP22.54■■□□□ 1.2
SPNS1-203ENST00000334536 CACNA2D3Q8IZS8 1091 aa22.54■■□□□ 1.2
SPNS1-203ENST00000334536 HDAC6Q9UBN7 1215 aa22.54■■□□□ 1.2
SPNS1-203ENST00000334536 A6NHS1 94 aa22.53■■□□□ 1.2
SPNS1-203ENST00000334536 EDIL3O43854 480 aa22.53■■□□□ 1.2
SPNS1-203ENST00000334536 MYO1EQ12965 1108 aa22.53■■□□□ 1.2
SPNS1-203ENST00000334536 SPA17Q15506 151 aa22.53■■□□□ 1.2
SPNS1-203ENST00000334536 SDCCAG8Q86SQ7 713 aaPredicted RBP22.53■■□□□ 1.2
SPNS1-203ENST00000334536 KIRREL3Q8IZU9 778 aa22.53■■□□□ 1.2
SPNS1-203ENST00000334536 COA7Q96BR5 231 aa22.53■■□□□ 1.2
SPNS1-203ENST00000334536 NAP1L4Q99733 375 aaKnown RBP22.53■■□□□ 1.2
SPNS1-203ENST00000334536 EDEM3Q9BZQ6 932 aa22.53■■□□□ 1.2
SPNS1-203ENST00000334536 NDST4Q9H3R1 872 aa22.53■■□□□ 1.2
SPNS1-203ENST00000334536 STIM2Q9P246 746 aa22.53■■□□□ 1.2
SPNS1-203ENST00000334536 PLAGL2Q9UPG8 496 aa22.53■■□□□ 1.2
SPNS1-203ENST00000334536 SIK3Q9Y2K2 1263 aa22.53■■□□□ 1.2
SPNS1-203ENST00000334536 EP400Q96L91 3159 aa22.53■■□□□ 1.2
SPNS1-203ENST00000334536 ENO4A6NNW6 628 aa22.53■■□□□ 1.2
SPNS1-203ENST00000334536 SLC26A4O43511 780 aa22.53■■□□□ 1.2
SPNS1-203ENST00000334536 SLC37A4O43826 429 aa22.53■■□□□ 1.2
SPNS1-203ENST00000334536 PPFIA2O75334 1257 aa22.53■■□□□ 1.2
SPNS1-203ENST00000334536 TTLL1O95922 423 aa22.53■■□□□ 1.2
SPNS1-203ENST00000334536 SSBP05455 408 aaKnown RBP eCLIP22.53■■□□□ 1.2
SPNS1-203ENST00000334536 PAEPP09466 180 aa22.53■■□□□ 1.2
SPNS1-203ENST00000334536 MAGEA8P43361 318 aa22.53■■□□□ 1.2
SPNS1-203ENST00000334536 ZNF543Q08ER8 600 aa22.53■■□□□ 1.2
SPNS1-203ENST00000334536 KIF5AQ12840 1032 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms