RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 MRPS27Q92552 414 aaKnown RBP18.54■□□□□ 0.56
SHOX-201ENST00000334060 MTRQ99707 1265 aa18.54■□□□□ 0.56
SHOX-201ENST00000334060 BMP2KQ9NSY1 1161 aaPredicted RBP18.54■□□□□ 0.56
SHOX-201ENST00000334060 ADAMTS4O75173 837 aa18.53■□□□□ 0.56
SHOX-201ENST00000334060 ATG7O95352 703 aa18.53■□□□□ 0.56
SHOX-201ENST00000334060 SUPT20HL2P0C7V6 817 aa18.53■□□□□ 0.56
SHOX-201ENST00000334060 PDIA5Q14554 519 aa18.53■□□□□ 0.56
SHOX-201ENST00000334060 E2F4Q16254 413 aa18.53■□□□□ 0.56
SHOX-201ENST00000334060 LONRF3Q496Y0 759 aa18.53■□□□□ 0.56
SHOX-201ENST00000334060 PLA2G4FQ68DD2 849 aa18.53■□□□□ 0.56
SHOX-201ENST00000334060 ZNF746Q6NUN9 644 aaPredicted RBP18.53■□□□□ 0.56
SHOX-201ENST00000334060 DHX58Q96C10 678 aa18.53■□□□□ 0.56
SHOX-201ENST00000334060 BLOC1S4Q9NUP1 217 aa18.53■□□□□ 0.56
SHOX-201ENST00000334060 DDX19AQ9NUU7 478 aaKnown RBP18.53■□□□□ 0.56
SHOX-201ENST00000334060 KIAA1024Q9UPX6 916 aa18.53■□□□□ 0.56
SHOX-201ENST00000334060 A0A1W2PQ27 194 aa18.53■□□□□ 0.56
SHOX-201ENST00000334060 A0A1W2PQ64 194 aa18.53■□□□□ 0.56
SHOX-201ENST00000334060 A0A1W2PQD8 194 aa18.53■□□□□ 0.56
SHOX-201ENST00000334060 STBD1O95210 358 aa18.53■□□□□ 0.56
SHOX-201ENST00000334060 C6orf222P0C671 652 aaPredicted RBP18.53■□□□□ 0.56
SHOX-201ENST00000334060 CHMP4BP1P59074 171 aa18.53■□□□□ 0.56
SHOX-201ENST00000334060 UBE2HP62256 183 aa18.53■□□□□ 0.56
SHOX-201ENST00000334060 KRT76Q01546 638 aa18.53■□□□□ 0.56
SHOX-201ENST00000334060 DHX8Q14562 1220 aaKnown RBP18.53■□□□□ 0.56
SHOX-201ENST00000334060 FMR1NBQ8N0W7 255 aaPredicted RBP18.53■□□□□ 0.56
SHOX-201ENST00000334060 DDX20Q9UHI6 824 aaKnown RBP18.53■□□□□ 0.56
SHOX-201ENST00000334060 KCNH3Q9ULD8 1083 aa18.53■□□□□ 0.56
SHOX-201ENST00000334060 FRMPD3Q5JV73 1810 aa18.52■□□□□ 0.56
SHOX-201ENST00000334060 WDR64B1ANS9 1081 aa18.52■□□□□ 0.56
SHOX-201ENST00000334060 PRMT2P55345 433 aa18.52■□□□□ 0.56
SHOX-201ENST00000334060 EPHA7Q15375 998 aa18.52■□□□□ 0.56
SHOX-201ENST00000334060 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.52■□□□□ 0.56
SHOX-201ENST00000334060 DACT1Q9NYF0 836 aa18.52■□□□□ 0.56
SHOX-201ENST00000334060 SERTAD1Q9UHV2 236 aa18.52■□□□□ 0.56
SHOX-201ENST00000334060 PCDHA10Q9Y5I2 948 aa18.52■□□□□ 0.56
SHOX-201ENST00000334060 IGKV6D-21A0A0A0MT36 114 aa18.51■□□□□ 0.55
SHOX-201ENST00000334060 NOP56O00567 594 aaKnown RBP18.51■□□□□ 0.55
SHOX-201ENST00000334060 BACH1O14867 736 aa18.51■□□□□ 0.55
SHOX-201ENST00000334060 LGALS2P05162 132 aa18.51■□□□□ 0.55
SHOX-201ENST00000334060 CCL5P13501 91 aa18.51■□□□□ 0.55
SHOX-201ENST00000334060 UBA7P41226 1012 aa18.51■□□□□ 0.55
SHOX-201ENST00000334060 NPEPPSP55786 919 aa18.51■□□□□ 0.55
SHOX-201ENST00000334060 HIC1Q14526 733 aa18.51■□□□□ 0.55
SHOX-201ENST00000334060 ARHGEF6Q15052 776 aa18.51■□□□□ 0.55
SHOX-201ENST00000334060 TMEM119Q4V9L6 283 aa18.51■□□□□ 0.55
SHOX-201ENST00000334060 FBXO46Q6PJ61 603 aaPredicted RBP18.51■□□□□ 0.55
SHOX-201ENST00000334060 PPTC7Q8NI37 304 aa18.51■□□□□ 0.55
SHOX-201ENST00000334060 TRAPPC12Q8WVT3 735 aa18.51■□□□□ 0.55
SHOX-201ENST00000334060 KAT2BQ92831 832 aa18.51■□□□□ 0.55
SHOX-201ENST00000334060 DEFB118Q96PH6 123 aa18.51■□□□□ 0.55
SHOX-201ENST00000334060 C16orf70Q9BSU1 422 aa18.51■□□□□ 0.55
SHOX-201ENST00000334060 RNPEPQ9H4A4 650 aa18.51■□□□□ 0.55
SHOX-201ENST00000334060 XPNPEP3Q9NQH7 507 aa18.51■□□□□ 0.55
SHOX-201ENST00000334060 GOLGA6L4A6NEF3 574 aa18.51■□□□□ 0.55
SHOX-201ENST00000334060 ACTN4O43707 911 aaKnown RBP18.51■□□□□ 0.55
SHOX-201ENST00000334060 DUSP11O75319 330 aaKnown RBP18.51■□□□□ 0.55
SHOX-201ENST00000334060 PRR29P0C7W0 189 aa18.51■□□□□ 0.55
SHOX-201ENST00000334060 KCNV1Q6PIU1 500 aa18.51■□□□□ 0.55
SHOX-201ENST00000334060 SEPT1Q8WYJ6 367 aa18.51■□□□□ 0.55
SHOX-201ENST00000334060 ZNF333Q96JL9 665 aa18.51■□□□□ 0.55
SHOX-201ENST00000334060 CCSER1Q9C0I3 900 aa18.51■□□□□ 0.55
SHOX-201ENST00000334060 MCOLN1Q9GZU1 580 aa18.51■□□□□ 0.55
SHOX-201ENST00000334060 HMX1Q9NP08 348 aaPredicted RBP18.51■□□□□ 0.55
SHOX-201ENST00000334060 IGSF9BQ9UPX0 1349 aa18.51■□□□□ 0.55
SHOX-201ENST00000334060 NPHP3-ACAD11A0A0J9YXS1 232 aa18.5■□□□□ 0.55
SHOX-201ENST00000334060 RPA1P27694 616 aa18.5■□□□□ 0.55
SHOX-201ENST00000334060 CACNB1Q02641 598 aaPredicted RBP18.5■□□□□ 0.55
SHOX-201ENST00000334060 LAMC2Q13753 1193 aa18.5■□□□□ 0.55
SHOX-201ENST00000334060 MCM6Q14566 821 aa18.5■□□□□ 0.55
SHOX-201ENST00000334060 CAMK4Q16566 473 aa18.5■□□□□ 0.55
SHOX-201ENST00000334060 KRT79Q5XKE5 535 aa18.5■□□□□ 0.55
SHOX-201ENST00000334060 ANO5Q75V66 913 aa18.5■□□□□ 0.55
SHOX-201ENST00000334060 TRMT44Q8IYL2 757 aaKnown RBP18.5■□□□□ 0.55
SHOX-201ENST00000334060 EMID1Q96A84 441 aaPredicted RBP18.5■□□□□ 0.55
SHOX-201ENST00000334060 RNF208Q9H0X6 261 aa18.5■□□□□ 0.55
SHOX-201ENST00000334060 FAM237AA0A1B0GTK4 181 aa18.5■□□□□ 0.55
SHOX-201ENST00000334060 A6NJR5 290 aa18.5■□□□□ 0.55
SHOX-201ENST00000334060 ZNF202O95125 648 aa18.5■□□□□ 0.55
SHOX-201ENST00000334060 RARBP10826 455 aa18.5■□□□□ 0.55
SHOX-201ENST00000334060 SOX10P56693 466 aa18.5■□□□□ 0.55
SHOX-201ENST00000334060 PRKCEQ02156 737 aa18.5■□□□□ 0.55
SHOX-201ENST00000334060 RAD51AP2Q09MP3 1159 aa18.5■□□□□ 0.55
SHOX-201ENST00000334060 FSCN1Q16658 493 aaKnown RBP18.5■□□□□ 0.55
SHOX-201ENST00000334060 PDXDC2PQ6P474 469 aa18.5■□□□□ 0.55
SHOX-201ENST00000334060 CXCL17Q6UXB2 119 aa18.5■□□□□ 0.55
SHOX-201ENST00000334060 RASSF8Q8NHQ8 419 aa18.5■□□□□ 0.55
SHOX-201ENST00000334060 AK8Q96MA6 479 aa18.5■□□□□ 0.55
SHOX-201ENST00000334060 ZNF302Q9NR11 478 aa18.5■□□□□ 0.55
SHOX-201ENST00000334060 MYL3P08590 195 aa18.49■□□□□ 0.55
SHOX-201ENST00000334060 SYKP43405 635 aa18.49■□□□□ 0.55
SHOX-201ENST00000334060 JAK3P52333 1124 aa18.49■□□□□ 0.55
SHOX-201ENST00000334060 GJA9P57773 515 aa18.49■□□□□ 0.55
SHOX-201ENST00000334060 CCSAPQ6IQ19 270 aaPredicted RBP18.49■□□□□ 0.55
SHOX-201ENST00000334060 SMAP1Q8IYB5 467 aaPredicted RBP18.49■□□□□ 0.55
SHOX-201ENST00000334060 PAK6Q9NQU5 681 aaPredicted RBP18.49■□□□□ 0.55
SHOX-201ENST00000334060 NRBP1Q9UHY1 535 aa18.49■□□□□ 0.55
SHOX-201ENST00000334060 P4HBP07237 508 aaKnown RBP18.48■□□□□ 0.55
SHOX-201ENST00000334060 PSAPP07602 524 aa18.48■□□□□ 0.55
SHOX-201ENST00000334060 AFMP43652 599 aa18.48■□□□□ 0.55
SHOX-201ENST00000334060 GNASQ5JWF2 1037 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms