RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 TMEM247A6NEH6 219 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 OTULINQ96BN8 352 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 TGS1Q96RS0 853 aaKnown RBP11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 CCDC134Q9H6E4 229 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 MPP6Q9NZW5 540 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 IQGAP2Q13576 1575 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 ZSCAN9O15535 394 aaPredicted RBP11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 FAM200BP0CF97 657 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 PYGMP11217 842 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 OR9Q1Q8NGQ5 310 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 ZNF473Q8WTR7 871 aaKnown RBP11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 LRCH1Q9Y2L9 728 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 CCDC78A2IDD5 438 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 BRIP1Q9BX63 1249 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 DCDC2Q9UHG0 476 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 USP15Q9Y4E8 981 aaPredicted RBP11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 YWHAHQ04917 246 aaPredicted RBP11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 PUM3Q15397 648 aaKnown RBP11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 HADHQ16836 314 aaKnown RBP11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 PROSER2Q86WR7 435 aaPredicted RBP11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 NT5C3AQ9H0P0 336 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 CIDEBQ9UHD4 219 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 SYNDIG1LA6NDD5 238 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 CCT8L1PA6NM43 557 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 CYTH3O43739 400 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 FMNL1O95466 1100 aaPredicted RBP11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 ANP32DO95626 131 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 IFRD2Q12894 506 aaPredicted RBP11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 RGS9BPQ6ZS82 235 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 EMC3Q9P0I2 261 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 CCDC88CQ9P219 2028 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 S100A9P06702 114 aaKnown RBP11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 ARPC4P59998 168 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 EGFL6Q8IUX8 553 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 NOSTRINQ8IVI9 506 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 JARID2Q92833 1246 aaPredicted RBP11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 ZBTB3Q9H5J0 574 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 TAF1DQ9H5J8 278 aaPredicted RBP11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 DNMT1P26358 1616 aaKnown RBP11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 NDUFA10O95299 355 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 GRK2P25098 689 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 MARK3P27448 753 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 GYS2P54840 703 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 KBTBD12Q3ZCT8 623 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 DCLRE1BQ9H816 532 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 LCMT1Q9UIC8 334 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 NOVA2Q9UNW9 492 aaKnown RBP11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 LRRIQ1Q96JM4 1722 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 AGBL2Q5U5Z8 902 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 ZBED2Q9BTP6 218 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 PAG1Q9NWQ8 432 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 EIF4E1BA6NMX2 242 aaKnown RBP11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 GSNP06396 782 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 DMPKQ09013 629 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 MFSD4BQ5TF39 518 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 FAM81BQ96LP2 452 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 FANCLQ9NW38 375 aa11.07□□□□□ -0.64
SPTBN1-201ENST00000333896 KDM3AQ9Y4C1 1321 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 PJA2O43164 708 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 DR1Q01658 176 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 SEMA3FQ13275 785 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 TIMMDC1Q9NPL8 285 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 POLR2EP19388 210 aaKnown RBP11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 YARSP54577 528 aaKnown RBP11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 C2orf54Q08AI8 447 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 LVRNQ6Q4G3 990 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 PDZD4Q76G19 769 aaPredicted RBP11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 MTRQ99707 1265 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 RPAP3Q9H6T3 665 aaPredicted RBP11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 NLRC4Q9NPP4 1024 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 CHMP2BQ9UQN3 213 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 R3HDM2Q9Y2K5 976 aaKnown RBP11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 EXOC3O60645 756 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 MAGOHP61326 146 aaKnown RBP11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 SLC9C2Q5TAH2 1124 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 NCAPG2Q86XI2 1143 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 STX19Q8N4C7 294 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 MAGOHBQ96A72 148 aaKnown RBP11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 PHF21AQ96BD5 680 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 MCM9Q9NXL9 1143 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 RTEL1Q9NZ71 1219 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 APOBEC2Q9Y235 224 aaKnown RBP11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 MAP1BP46821 2468 aaKnown RBP11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 AREL1O15033 823 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 KCNA2P16389 499 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 EPAS1Q99814 870 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 EIF2B2P49770 351 aaKnown RBP11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 PNOCQ13519 176 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 BYSLQ13895 437 aaKnown RBP11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 OTUD6AQ7L8S5 288 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 SH3GLB1Q9Y371 365 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 ECEL1O95672 775 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 SRGAP2BP0DMP2 458 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 CDR2LQ86X02 465 aaPredicted RBP11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 CPP00450 1065 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 HDLBPQ00341 1268 aaKnown RBP11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 HIC1Q14526 733 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 UBE2Q1Q7Z7E8 422 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 DEPDC1BQ8WUY9 529 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 OMA1Q96E52 524 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms