RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 PAXBP1Q9Y5B6 917 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 CD2APQ9Y5K6 639 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 ITIH6Q6UXX5 1313 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 MYH9P35579 1960 aaKnown RBP9.71□□□□□ -0.86
LSAMP-201ENST00000333617 DYNC1I1O14576 645 aa9.71□□□□□ -0.86
LSAMP-201ENST00000333617 ARHGAP6O43182 974 aa9.71□□□□□ -0.86
LSAMP-201ENST00000333617 STX10O60499 249 aa9.71□□□□□ -0.86
LSAMP-201ENST00000333617 TPM1P09493 284 aa9.71□□□□□ -0.86
LSAMP-201ENST00000333617 FCER1AP12319 257 aa9.71□□□□□ -0.86
LSAMP-201ENST00000333617 TAL1P17542 331 aaPredicted RBP9.71□□□□□ -0.86
LSAMP-201ENST00000333617 CTHP32929 405 aa9.71□□□□□ -0.86
LSAMP-201ENST00000333617 CIITAP33076 1130 aa9.71□□□□□ -0.86
LSAMP-201ENST00000333617 ZNF76P36508 570 aa9.71□□□□□ -0.86
LSAMP-201ENST00000333617 PMS1P54277 932 aaKnown RBP9.71□□□□□ -0.86
LSAMP-201ENST00000333617 ADKP55263 362 aaKnown RBP9.71□□□□□ -0.86
LSAMP-201ENST00000333617 TTI2Q6NXR4 508 aa9.71□□□□□ -0.86
LSAMP-201ENST00000333617 DYMQ7RTS9 669 aa9.71□□□□□ -0.86
LSAMP-201ENST00000333617 KCNK18Q7Z418 384 aa9.71□□□□□ -0.86
LSAMP-201ENST00000333617 FCHSD1Q86WN1 690 aa9.71□□□□□ -0.86
LSAMP-201ENST00000333617 IRF2BP1Q8IU81 584 aa9.71□□□□□ -0.86
LSAMP-201ENST00000333617 TMEM139Q8IV31 216 aa9.71□□□□□ -0.86
LSAMP-201ENST00000333617 KIAA0895Q8NCT3 520 aa9.71□□□□□ -0.86
LSAMP-201ENST00000333617 ERMNQ8TAM6 284 aa9.71□□□□□ -0.86
LSAMP-201ENST00000333617 ETNPPLQ8TBG4 499 aa9.71□□□□□ -0.86
LSAMP-201ENST00000333617 BAP1Q92560 729 aa9.71□□□□□ -0.86
LSAMP-201ENST00000333617 PANX2Q96RD6 677 aa9.71□□□□□ -0.86
LSAMP-201ENST00000333617 SRRTQ9BXP5 876 aaKnown RBP9.71□□□□□ -0.86
LSAMP-201ENST00000333617 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.71□□□□□ -0.86
LSAMP-201ENST00000333617 KIAA1024Q9UPX6 916 aa9.71□□□□□ -0.86
LSAMP-201ENST00000333617 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.71□□□□□ -0.86
LSAMP-201ENST00000333617 PTPRFP10586 1907 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 MYH10P35580 1976 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 ABCB11O95342 1321 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 PHF20L1A8MW92 1017 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 FAM86B1E9PN63 330 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 GCOM1H8Y6P7 765 aaPredicted RBP9.7□□□□□ -0.86
LSAMP-201ENST00000333617 SIAH2O43255 324 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 CFBP00751 764 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 CYP3A4P08684 503 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 FAM86B2P0C5J1 330 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 POLR2MP0CAP2 368 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 GMPSP49915 693 aaPredicted RBP9.7□□□□□ -0.86
LSAMP-201ENST00000333617 RASSF7Q02833 373 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 RBL2Q08999 1139 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 PSMD2Q13200 908 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 TRIM14Q14142 442 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 R3HDM1Q15032 1099 aaKnown RBP9.7□□□□□ -0.86
LSAMP-201ENST00000333617 LINC01559Q495D7 138 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 HAUS3Q68CZ6 603 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 ANKRD40Q6AI12 368 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 FAM114A1Q8IWE2 563 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 CSGALNACT2Q8N6G5 542 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 ZNF592Q92610 1267 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 HPS1Q92902 700 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 FAM20AQ96MK3 541 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 TEPSINQ96N21 525 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 UIMC1Q96RL1 719 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 ZNF341Q9BYN7 854 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 GLIS2Q9BZE0 524 aaPredicted RBP9.7□□□□□ -0.86
LSAMP-201ENST00000333617 EHMT1Q9H9B1 1298 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 GINM1Q9NU53 330 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 LIMD1Q9UGP4 676 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 SCAF8Q9UPN6 1271 aaKnown RBP9.7□□□□□ -0.86
LSAMP-201ENST00000333617 MRPL11Q9Y3B7 192 aaKnown RBP9.7□□□□□ -0.86
LSAMP-201ENST00000333617 GJA3Q9Y6H8 435 aa9.7□□□□□ -0.86
LSAMP-201ENST00000333617 UTRNP46939 3433 aa9.69□□□□□ -0.86
LSAMP-201ENST00000333617 ZSCAN12O43309 604 aa9.69□□□□□ -0.86
LSAMP-201ENST00000333617 EGFRP00533 1210 aa9.69□□□□□ -0.86
LSAMP-201ENST00000333617 TUBB4AP04350 444 aa9.69□□□□□ -0.86
LSAMP-201ENST00000333617 SSBP05455 408 aaKnown RBP eCLIP9.69□□□□□ -0.86
LSAMP-201ENST00000333617 PLA2G4BP0C869 781 aa9.69□□□□□ -0.86
LSAMP-201ENST00000333617 IDEP14735 1019 aa9.69□□□□□ -0.86
LSAMP-201ENST00000333617 GTF2F1P35269 517 aaKnown RBP eCLIP9.69□□□□□ -0.86
LSAMP-201ENST00000333617 STAT3P40763 770 aa9.69□□□□□ -0.86
LSAMP-201ENST00000333617 UBXN1Q04323 297 aa9.69□□□□□ -0.86
LSAMP-201ENST00000333617 SPIRE1Q08AE8 756 aa9.69□□□□□ -0.86
LSAMP-201ENST00000333617 TBC1D10BQ4KMP7 808 aaPredicted RBP9.69□□□□□ -0.86
LSAMP-201ENST00000333617 NCAPH2Q6IBW4 605 aa9.69□□□□□ -0.86
LSAMP-201ENST00000333617 CENPPQ6IPU0 288 aa9.69□□□□□ -0.86
LSAMP-201ENST00000333617 CCDC84Q86UT8 332 aaPredicted RBP9.69□□□□□ -0.86
LSAMP-201ENST00000333617 CNGA4Q8IV77 575 aa9.69□□□□□ -0.86
LSAMP-201ENST00000333617 HPS3Q969F9 1004 aa9.69□□□□□ -0.86
LSAMP-201ENST00000333617 LENG9Q96B70 501 aa9.69□□□□□ -0.86
LSAMP-201ENST00000333617 DNAJC19Q96DA6 116 aa9.69□□□□□ -0.86
LSAMP-201ENST00000333617 CCDC51Q96ER9 411 aa9.69□□□□□ -0.86
LSAMP-201ENST00000333617 DUSP9Q99956 384 aaKnown RBP9.69□□□□□ -0.86
LSAMP-201ENST00000333617 NAA15Q9BXJ9 866 aaKnown RBP9.69□□□□□ -0.86
LSAMP-201ENST00000333617 SLC39A2Q9NP94 309 aa9.69□□□□□ -0.86
LSAMP-201ENST00000333617 CNOT7Q9UIV1 285 aaKnown RBP9.69□□□□□ -0.86
LSAMP-201ENST00000333617 DOCK5Q9H7D0 1870 aa9.69□□□□□ -0.86
LSAMP-201ENST00000333617 WDR90Q96KV7 1748 aa9.69□□□□□ -0.86
LSAMP-201ENST00000333617 LGALS16A8MUM7 142 aa9.68□□□□□ -0.86
LSAMP-201ENST00000333617 E9PMD0 336 aa9.68□□□□□ -0.86
LSAMP-201ENST00000333617 FZD9O00144 591 aa9.68□□□□□ -0.86
LSAMP-201ENST00000333617 MSH4O15457 936 aa9.68□□□□□ -0.86
LSAMP-201ENST00000333617 CTNND1O60716 968 aaKnown RBP9.68□□□□□ -0.86
LSAMP-201ENST00000333617 MFAP3LO75121 409 aa9.68□□□□□ -0.86
LSAMP-201ENST00000333617 GYPCP04921 128 aa9.68□□□□□ -0.86
LSAMP-201ENST00000333617 LDHDQ86WU2 507 aa9.68□□□□□ -0.86
LSAMP-201ENST00000333617 GUF1Q8N442 669 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms