RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 TRPV6Q9H1D0 765 aa12.49□□□□□ -0.41
APOBEC3B-201ENST00000333467 KIAA1468Q9P260 1216 aa12.49□□□□□ -0.41
APOBEC3B-201ENST00000333467 CNTNAP5Q8WYK1 1306 aa12.49□□□□□ -0.41
APOBEC3B-201ENST00000333467 IKBKBO14920 756 aa12.48□□□□□ -0.41
APOBEC3B-201ENST00000333467 EIF3JO75822 258 aaKnown RBP12.48□□□□□ -0.41
APOBEC3B-201ENST00000333467 RGS20O76081 388 aa12.48□□□□□ -0.41
APOBEC3B-201ENST00000333467 GNAQP50148 359 aa12.48□□□□□ -0.41
APOBEC3B-201ENST00000333467 METAP2P50579 478 aaKnown RBP eCLIP12.48□□□□□ -0.41
APOBEC3B-201ENST00000333467 CEBPZQ03701 1054 aaKnown RBP12.48□□□□□ -0.41
APOBEC3B-201ENST00000333467 SLC39A14Q15043 492 aa12.48□□□□□ -0.41
APOBEC3B-201ENST00000333467 APOA5Q6Q788 366 aa12.48□□□□□ -0.41
APOBEC3B-201ENST00000333467 TMTC3Q6ZXV5 915 aa12.48□□□□□ -0.41
APOBEC3B-201ENST00000333467 DEFB123Q8N688 67 aa12.48□□□□□ -0.41
APOBEC3B-201ENST00000333467 AFG1LQ8WV93 481 aa12.48□□□□□ -0.41
APOBEC3B-201ENST00000333467 LZTS2Q9BRK4 669 aa12.48□□□□□ -0.41
APOBEC3B-201ENST00000333467 SEZ6LQ9BYH1 1024 aa12.48□□□□□ -0.41
APOBEC3B-201ENST00000333467 HIPK3Q9H422 1215 aa12.48□□□□□ -0.41
APOBEC3B-201ENST00000333467 TRMT13Q9NUP7 481 aaKnown RBP12.48□□□□□ -0.41
APOBEC3B-201ENST00000333467 MORC2Q9Y6X9 1032 aaPredicted RBP12.48□□□□□ -0.41
APOBEC3B-201ENST00000333467 CTIFO43310 598 aaKnown RBP12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 CSF2RAP15509 400 aa12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 SMARCA1P28370 1054 aa12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 CCND2P30279 289 aa12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 CYP2C18P33260 490 aa12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 NLRP12P59046 1061 aa12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 PPIGQ13427 754 aaKnown RBP eCLIP12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 FAM47CQ5HY64 1035 aa12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 LRRC8AQ8IWT6 810 aa12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 DHX40Q8IX18 779 aaKnown RBP12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 CCDC150Q8NCX0 1101 aa12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 ZFP91Q96JP5 570 aaPredicted RBP12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 NOC4LQ9BVI4 516 aaKnown RBP12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 WNT8AQ9H1J5 351 aa12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 HOOK1Q9UJC3 728 aaKnown RBP12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 DDX41Q9UJV9 622 aaKnown RBP12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 CCDC196A0A1B0GTZ2 297 aa12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 hCG_1642624A0A1W2PR95 340 aa12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 ZBTB43O43298 467 aa12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 SORBS3O60504 671 aa12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 KPNA6O60684 536 aa12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 DTNBO60941 627 aa12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 UBA1P22314 1058 aaKnown RBP12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 U2AF2P26368 475 aaKnown RBP eCLIP12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 NBPF20Q3BBV1 942 aa12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 C11orf57Q6ZUT1 292 aaPredicted RBP12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 VSIG10LQ86VR7 867 aa12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 CCDC82Q8N4S0 544 aa12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 TMEM199Q8N511 208 aa12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 FANCBQ8NB91 859 aa12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 EMID1Q96A84 441 aaPredicted RBP12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 CHD9Q3L8U1 2897 aa12.47□□□□□ -0.41
APOBEC3B-201ENST00000333467 SIP14410 1827 aa12.46□□□□□ -0.41
APOBEC3B-201ENST00000333467 CCP110O43303 1012 aa12.46□□□□□ -0.42
APOBEC3B-201ENST00000333467 ZNF286BP0CG31 522 aa12.46□□□□□ -0.42
APOBEC3B-201ENST00000333467 CYP2C9P11712 490 aa12.46□□□□□ -0.42
APOBEC3B-201ENST00000333467 CCL23P55773 120 aa12.46□□□□□ -0.42
APOBEC3B-201ENST00000333467 CHMP4BP1P59074 171 aa12.46□□□□□ -0.42
APOBEC3B-201ENST00000333467 NFRKBQ6P4R8 1299 aa12.46□□□□□ -0.42
APOBEC3B-201ENST00000333467 USP17L6PQ6QN14 398 aa12.46□□□□□ -0.42
APOBEC3B-201ENST00000333467 GPKOWQ92917 476 aaPredicted RBP eCLIP12.46□□□□□ -0.42
APOBEC3B-201ENST00000333467 CUL5Q93034 780 aa12.46□□□□□ -0.42
APOBEC3B-201ENST00000333467 ALG1Q9BT22 464 aa12.46□□□□□ -0.42
APOBEC3B-201ENST00000333467 TET1Q8NFU7 2136 aa12.46□□□□□ -0.42
APOBEC3B-201ENST00000333467 KAT6AQ92794 2004 aa12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 UNC80Q8N2C7 3258 aa12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 GOLGA8AA7E2F4 631 aa12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 PIK3CDO00329 1044 aa12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 MEIS2O14770 477 aa12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 CBFA2T2O43439 604 aa12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 CUTAO60888 179 aa12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 ZNF202O95125 648 aa12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 GGPS1O95749 300 aa12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 ACRP10323 421 aa12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 NDUFA8P51970 172 aa12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 MRPS9P82933 396 aaKnown RBP12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 GUCY1B3Q02153 619 aa12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 SAFBQ15424 915 aaKnown RBP eCLIP12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 RTN1Q16799 776 aa12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 AXDND1Q5T1B0 1012 aaPredicted RBP12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 ZNF697Q5TEC3 545 aa12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 PSRC1Q6PGN9 363 aaPredicted RBP12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 KCNV1Q6PIU1 500 aa12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 C16orf59Q7L2K0 433 aa12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 HEATR3Q7Z4Q2 680 aa12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 DHX37Q8IY37 1157 aaKnown RBP12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 PPTC7Q8NI37 304 aa12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 CACTINQ8WUQ7 758 aaKnown RBP12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 CCDC94Q9BW85 323 aaPredicted RBP12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 RBM28Q9NW13 759 aaKnown RBP12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 HPSEQ9Y251 543 aa12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 CLIC4Q9Y696 253 aa12.45□□□□□ -0.42
APOBEC3B-201ENST00000333467 WDR81Q562E7 1941 aa12.44□□□□□ -0.42
APOBEC3B-201ENST00000333467 PRUNE2Q8WUY3 3088 aa12.44□□□□□ -0.42
APOBEC3B-201ENST00000333467 F2P00734 622 aa12.44□□□□□ -0.42
APOBEC3B-201ENST00000333467 SUPT20HL2P0C7V6 817 aa12.44□□□□□ -0.42
APOBEC3B-201ENST00000333467 TNNT1P13805 278 aa12.44□□□□□ -0.42
APOBEC3B-201ENST00000333467 IFNAR1P17181 557 aa12.44□□□□□ -0.42
APOBEC3B-201ENST00000333467 SMAD3P84022 425 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms