RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 KCNA2P16389 499 aa18.51■□□□□ 0.55
PDLIM1-201ENST00000329399 SREBF1P36956 1147 aa18.51■□□□□ 0.55
PDLIM1-201ENST00000329399 CHMP4BP1P59074 171 aa18.51■□□□□ 0.55
PDLIM1-201ENST00000329399 UVSSAQ2YD98 709 aa18.51■□□□□ 0.55
PDLIM1-201ENST00000329399 KCNV1Q6PIU1 500 aa18.51■□□□□ 0.55
PDLIM1-201ENST00000329399 ANP32BQ92688 251 aaKnown RBP18.51■□□□□ 0.55
PDLIM1-201ENST00000329399 JADE2Q9NQC1 790 aa18.51■□□□□ 0.55
PDLIM1-201ENST00000329399 TRMT13Q9NUP7 481 aaKnown RBP18.51■□□□□ 0.55
PDLIM1-201ENST00000329399 FAM86B1E9PN63 330 aa18.5■□□□□ 0.55
PDLIM1-201ENST00000329399 B4GALT4O60513 344 aa18.5■□□□□ 0.55
PDLIM1-201ENST00000329399 ZNF202O95125 648 aa18.5■□□□□ 0.55
PDLIM1-201ENST00000329399 FOSP01100 380 aaPredicted RBP18.5■□□□□ 0.55
PDLIM1-201ENST00000329399 FAM86B2P0C5J1 330 aa18.5■□□□□ 0.55
PDLIM1-201ENST00000329399 HOXD8P13378 290 aaPredicted RBP18.5■□□□□ 0.55
PDLIM1-201ENST00000329399 SYKP43405 635 aa18.5■□□□□ 0.55
PDLIM1-201ENST00000329399 ARHGAP4P98171 946 aa18.5■□□□□ 0.55
PDLIM1-201ENST00000329399 HIC1Q14526 733 aa18.5■□□□□ 0.55
PDLIM1-201ENST00000329399 GNPTABQ3T906 1256 aa18.5■□□□□ 0.55
PDLIM1-201ENST00000329399 BADQ92934 168 aa18.5■□□□□ 0.55
PDLIM1-201ENST00000329399 CTAGE1Q96RT6 745 aa18.5■□□□□ 0.55
PDLIM1-201ENST00000329399 MXRA8Q9BRK3 442 aa18.5■□□□□ 0.55
PDLIM1-201ENST00000329399 GOLPH3LQ9H4A5 285 aa18.5■□□□□ 0.55
PDLIM1-201ENST00000329399 MLXIPQ9HAP2 919 aa18.5■□□□□ 0.55
PDLIM1-201ENST00000329399 TMEM39AQ9NV64 488 aa18.5■□□□□ 0.55
PDLIM1-201ENST00000329399 TBX21Q9UL17 535 aa18.5■□□□□ 0.55
PDLIM1-201ENST00000329399 UMODL1Q5DID0 1318 aa18.49■□□□□ 0.55
PDLIM1-201ENST00000329399 DCDC2CA8MYV0 355 aa18.49■□□□□ 0.55
PDLIM1-201ENST00000329399 KIAA0355O15063 1070 aa18.49■□□□□ 0.55
PDLIM1-201ENST00000329399 PFKFB1P16118 471 aa18.49■□□□□ 0.55
PDLIM1-201ENST00000329399 LONP1P36776 959 aaKnown RBP18.49■□□□□ 0.55
PDLIM1-201ENST00000329399 NDUFA8P51970 172 aa18.49■□□□□ 0.55
PDLIM1-201ENST00000329399 SP4Q02446 784 aa18.49■□□□□ 0.55
PDLIM1-201ENST00000329399 AP3B2Q13367 1082 aa18.49■□□□□ 0.55
PDLIM1-201ENST00000329399 DGKDQ16760 1214 aa18.49■□□□□ 0.55
PDLIM1-201ENST00000329399 EARS2Q5JPH6 523 aaKnown RBP18.49■□□□□ 0.55
PDLIM1-201ENST00000329399 HABP4Q5JVS0 413 aaKnown RBP18.49■□□□□ 0.55
PDLIM1-201ENST00000329399 SASS6Q6UVJ0 657 aa18.49■□□□□ 0.55
PDLIM1-201ENST00000329399 NEK8Q86SG6 692 aa18.49■□□□□ 0.55
PDLIM1-201ENST00000329399 GAS2L3Q86XJ1 694 aa18.49■□□□□ 0.55
PDLIM1-201ENST00000329399 GPRASP2Q96D09 838 aa18.49■□□□□ 0.55
PDLIM1-201ENST00000329399 SDF4Q9BRK5 362 aa18.49■□□□□ 0.55
PDLIM1-201ENST00000329399 C16orf70Q9BSU1 422 aa18.49■□□□□ 0.55
PDLIM1-201ENST00000329399 KCNH7Q9NS40 1196 aa18.49■□□□□ 0.55
PDLIM1-201ENST00000329399 A0A1B0GVL5 298 aa18.48■□□□□ 0.55
PDLIM1-201ENST00000329399 MEIS1O00470 390 aa18.48■□□□□ 0.55
PDLIM1-201ENST00000329399 GCFC2P16383 781 aaKnown RBP18.48■□□□□ 0.55
PDLIM1-201ENST00000329399 EPHB4P54760 987 aa18.48■□□□□ 0.55
PDLIM1-201ENST00000329399 PTGDRQ13258 359 aa18.48■□□□□ 0.55
PDLIM1-201ENST00000329399 MTMR1Q13613 665 aa18.48■□□□□ 0.55
PDLIM1-201ENST00000329399 CEP55Q53EZ4 464 aa18.48■□□□□ 0.55
PDLIM1-201ENST00000329399 BRDTQ58F21 947 aaPredicted RBP18.48■□□□□ 0.55
PDLIM1-201ENST00000329399 SHC4Q6S5L8 630 aa18.48■□□□□ 0.55
PDLIM1-201ENST00000329399 METTL7BQ6UX53 244 aa18.48■□□□□ 0.55
PDLIM1-201ENST00000329399 NLRX1Q86UT6 975 aa18.48■□□□□ 0.55
PDLIM1-201ENST00000329399 GPR20Q99678 358 aa18.48■□□□□ 0.55
PDLIM1-201ENST00000329399 SENP7Q9BQF6 1050 aa18.48■□□□□ 0.55
PDLIM1-201ENST00000329399 FUCA2Q9BTY2 467 aa18.48■□□□□ 0.55
PDLIM1-201ENST00000329399 KCNH3Q9ULD8 1083 aa18.48■□□□□ 0.55
PDLIM1-201ENST00000329399 IGLV3-22A0A075B6J6 115 aa18.47■□□□□ 0.55
PDLIM1-201ENST00000329399 KPNA6O60684 536 aa18.47■□□□□ 0.55
PDLIM1-201ENST00000329399 PPFIA4O75335 1185 aa18.47■□□□□ 0.55
PDLIM1-201ENST00000329399 CYP2C9P11712 490 aa18.47■□□□□ 0.55
PDLIM1-201ENST00000329399 ATP2B1P20020 1258 aa18.47■□□□□ 0.55
PDLIM1-201ENST00000329399 ITGB3BPQ13352 177 aaPredicted RBP18.47■□□□□ 0.55
PDLIM1-201ENST00000329399 ZNF174Q15697 407 aa18.47■□□□□ 0.55
PDLIM1-201ENST00000329399 TRIM50Q86XT4 487 aa18.47■□□□□ 0.55
PDLIM1-201ENST00000329399 GSTTP1A0A1W2PQM5 241 aa18.46■□□□□ 0.55
PDLIM1-201ENST00000329399 HAS3O00219 553 aa18.46■□□□□ 0.55
PDLIM1-201ENST00000329399 CYP3A4P08684 503 aa18.46■□□□□ 0.55
PDLIM1-201ENST00000329399 CYP2C18P33260 490 aa18.46■□□□□ 0.55
PDLIM1-201ENST00000329399 PSEN2P49810 448 aa18.46■□□□□ 0.55
PDLIM1-201ENST00000329399 ZNF200P98182 395 aaPredicted RBP18.46■□□□□ 0.55
PDLIM1-201ENST00000329399 NEDD9Q14511 834 aa18.46■□□□□ 0.55
PDLIM1-201ENST00000329399 TPRNQ4KMQ1 711 aa18.46■□□□□ 0.55
PDLIM1-201ENST00000329399 AK8Q96MA6 479 aa18.46■□□□□ 0.55
PDLIM1-201ENST00000329399 FAM205CA6NFA0 338 aa18.46■□□□□ 0.54
PDLIM1-201ENST00000329399 F2P00734 622 aa18.46■□□□□ 0.54
PDLIM1-201ENST00000329399 BMP8BP34820 402 aa18.46■□□□□ 0.54
PDLIM1-201ENST00000329399 TXLNAP40222 546 aa18.46■□□□□ 0.54
PDLIM1-201ENST00000329399 USP11P51784 963 aa18.46■□□□□ 0.54
PDLIM1-201ENST00000329399 ZRSR1Q15695 479 aaKnown RBP18.46■□□□□ 0.54
PDLIM1-201ENST00000329399 INF2Q27J81 1249 aa18.46■□□□□ 0.54
PDLIM1-201ENST00000329399 KIAA0753Q2KHM9 967 aa18.46■□□□□ 0.54
PDLIM1-201ENST00000329399 FAM47CQ5HY64 1035 aa18.46■□□□□ 0.54
PDLIM1-201ENST00000329399 PPP4R3AQ6IN85 833 aa18.46■□□□□ 0.54
PDLIM1-201ENST00000329399 GDF6Q6KF10 455 aaPredicted RBP18.46■□□□□ 0.54
PDLIM1-201ENST00000329399 MOXD1Q6UVY6 613 aa18.46■□□□□ 0.54
PDLIM1-201ENST00000329399 DTHD1Q6ZMT9 781 aa18.46■□□□□ 0.54
PDLIM1-201ENST00000329399 C4orf32Q8N8J7 132 aa18.46■□□□□ 0.54
PDLIM1-201ENST00000329399 PPP1R12CQ9BZL4 782 aa18.46■□□□□ 0.54
PDLIM1-201ENST00000329399 AGO4Q9HCK5 861 aaKnown RBP18.46■□□□□ 0.54
PDLIM1-201ENST00000329399 HDAC6Q9UBN7 1215 aa18.46■□□□□ 0.54
PDLIM1-201ENST00000329399 PRKAG2Q9UGJ0 569 aa18.46■□□□□ 0.54
PDLIM1-201ENST00000329399 LTBP2Q14767 1821 aa18.45■□□□□ 0.54
PDLIM1-201ENST00000329399 DHX15O43143 795 aaKnown RBP18.45■□□□□ 0.54
PDLIM1-201ENST00000329399 TIMP1P01033 207 aa18.45■□□□□ 0.54
PDLIM1-201ENST00000329399 LGALS2P05162 132 aa18.45■□□□□ 0.54
PDLIM1-201ENST00000329399 RAG1P15918 1043 aa18.45■□□□□ 0.54
PDLIM1-201ENST00000329399 MCM7P33993 719 aa18.45■□□□□ 0.54
PDLIM1-201ENST00000329399 MFSD10Q14728 455 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms