RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 CDCA5Q96FF9 252 aa16.55■□□□□ 0.24
TPM3-205ENST00000328159 LXNQ9BS40 222 aa16.55■□□□□ 0.24
TPM3-205ENST00000328159 NAA15Q9BXJ9 866 aaKnown RBP16.55■□□□□ 0.24
TPM3-205ENST00000328159 ACAD9Q9H845 621 aa16.55■□□□□ 0.24
TPM3-205ENST00000328159 RSPH10B2B2RC85 870 aa16.54■□□□□ 0.24
TPM3-205ENST00000328159 ZBTB39O15060 712 aa16.54■□□□□ 0.24
TPM3-205ENST00000328159 RSPH10BP0C881 870 aa16.54■□□□□ 0.24
TPM3-205ENST00000328159 EPHX2P34913 555 aa16.54■□□□□ 0.24
TPM3-205ENST00000328159 NF2P35240 595 aa16.54■□□□□ 0.24
TPM3-205ENST00000328159 FKBP3Q00688 224 aaKnown RBP16.54■□□□□ 0.24
TPM3-205ENST00000328159 PLS1Q14651 629 aa16.54■□□□□ 0.24
TPM3-205ENST00000328159 EPM2AIP1Q7L775 607 aaPredicted RBP16.54■□□□□ 0.24
TPM3-205ENST00000328159 ZC3H15Q8WU90 426 aaKnown RBP16.54■□□□□ 0.24
TPM3-205ENST00000328159 MAF1Q9H063 256 aa16.54■□□□□ 0.24
TPM3-205ENST00000328159 KCTD10Q9H3F6 313 aa16.54■□□□□ 0.24
TPM3-205ENST00000328159 ELP3Q9H9T3 547 aa16.54■□□□□ 0.24
TPM3-205ENST00000328159 COL4A3BPQ9Y5P4 624 aa16.54■□□□□ 0.24
TPM3-205ENST00000328159 TRAF5O00463 557 aa16.54■□□□□ 0.24
TPM3-205ENST00000328159 NR3C2P08235 984 aa16.54■□□□□ 0.24
TPM3-205ENST00000328159 TBC1D8BQ0IIM8 1120 aa16.54■□□□□ 0.24
TPM3-205ENST00000328159 VSIG10LQ86VR7 867 aa16.54■□□□□ 0.24
TPM3-205ENST00000328159 NSUN6Q8TEA1 469 aaKnown RBP16.54■□□□□ 0.24
TPM3-205ENST00000328159 CEP63Q96MT8 703 aa16.54■□□□□ 0.24
TPM3-205ENST00000328159 A0A0G2JMZ2 1700 aa16.53■□□□□ 0.24
TPM3-205ENST00000328159 RNF225M0QZC1 329 aaPredicted RBP16.53■□□□□ 0.24
TPM3-205ENST00000328159 KIF2AO00139 706 aaPredicted RBP16.53■□□□□ 0.24
TPM3-205ENST00000328159 NKRFO15226 690 aaKnown RBP eCLIP16.53■□□□□ 0.24
TPM3-205ENST00000328159 ZSCAN12O43309 604 aa16.53■□□□□ 0.24
TPM3-205ENST00000328159 FAM13AO94988 1023 aa16.53■□□□□ 0.24
TPM3-205ENST00000328159 P4HBP07237 508 aaKnown RBP16.53■□□□□ 0.24
TPM3-205ENST00000328159 FECHP22830 423 aa16.53■□□□□ 0.24
TPM3-205ENST00000328159 CASP5P51878 434 aa16.53■□□□□ 0.24
TPM3-205ENST00000328159 PPATQ06203 517 aa16.53■□□□□ 0.24
TPM3-205ENST00000328159 MAN2A1Q16706 1144 aa16.53■□□□□ 0.24
TPM3-205ENST00000328159 VWA3BQ502W6 1294 aa16.53■□□□□ 0.24
TPM3-205ENST00000328159 FKBP15Q5T1M5 1219 aa16.53■□□□□ 0.24
TPM3-205ENST00000328159 PPP4R3CPQ6ZMV5 832 aa16.53■□□□□ 0.24
TPM3-205ENST00000328159 ERGIC2Q96RQ1 377 aa16.53■□□□□ 0.24
TPM3-205ENST00000328159 A1CFQ9NQ94 594 aaKnown RBP16.53■□□□□ 0.24
TPM3-205ENST00000328159 CYP39A1Q9NYL5 469 aa16.53■□□□□ 0.24
TPM3-205ENST00000328159 KCND2Q9NZV8 630 aa16.53■□□□□ 0.24
TPM3-205ENST00000328159 KIAA1217Q5T5P2 1943 aa16.52■□□□□ 0.24
TPM3-205ENST00000328159 TESPA1A2RU30 521 aaPredicted RBP16.52■□□□□ 0.24
TPM3-205ENST00000328159 MYBP10242 640 aa16.52■□□□□ 0.24
TPM3-205ENST00000328159 SYCP1Q15431 976 aa16.52■□□□□ 0.24
TPM3-205ENST00000328159 GADL1Q6ZQY3 521 aa16.52■□□□□ 0.24
TPM3-205ENST00000328159 ERO1BQ86YB8 467 aa16.52■□□□□ 0.24
TPM3-205ENST00000328159 ANKRD13AQ8IZ07 590 aa16.52■□□□□ 0.24
TPM3-205ENST00000328159 GPRASP2Q96D09 838 aa16.52■□□□□ 0.24
TPM3-205ENST00000328159 OTUD5Q96G74 571 aa16.52■□□□□ 0.24
TPM3-205ENST00000328159 CLMNQ96JQ2 1002 aa16.52■□□□□ 0.24
TPM3-205ENST00000328159 ZSWIM4Q9H7M6 989 aa16.52■□□□□ 0.24
TPM3-205ENST00000328159 OLFML3Q9NRN5 406 aa16.52■□□□□ 0.24
TPM3-205ENST00000328159 ABHD10Q9NUJ1 306 aa16.52■□□□□ 0.24
TPM3-205ENST00000328159 PPP2R2CQ9Y2T4 447 aa16.52■□□□□ 0.24
TPM3-205ENST00000328159 LCTP09848 1927 aa16.52■□□□□ 0.23
TPM3-205ENST00000328159 A0A0G2JLL6 359 aaPredicted RBP16.51■□□□□ 0.23
TPM3-205ENST00000328159 ARHGEF35A5YM69 484 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 ATP9AO75110 1047 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 KRT9P35527 623 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 TTLL12Q14166 644 aaPredicted RBP16.51■□□□□ 0.23
TPM3-205ENST00000328159 BMT2Q1RMZ1 405 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 EDRF1Q3B7T1 1238 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 TOGARAM2Q6ZUX3 1019 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 MOB2Q70IA6 237 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 PRRT2Q7Z6L0 340 aaPredicted RBP16.51■□□□□ 0.23
TPM3-205ENST00000328159 NLRX1Q86UT6 975 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 REXO1L1PQ8IX06 675 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 ZC3H3Q8IXZ2 948 aaKnown RBP16.51■□□□□ 0.23
TPM3-205ENST00000328159 PROCA1Q8NCQ7 364 aaPredicted RBP16.51■□□□□ 0.23
TPM3-205ENST00000328159 CHST13Q8NET6 341 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 NUP58Q9BVL2 599 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 NDST4Q9H3R1 872 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 BCAS3Q9H6U6 928 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 MRPL44Q9H9J2 332 aaKnown RBP16.51■□□□□ 0.23
TPM3-205ENST00000328159 POLD4Q9HCU8 107 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 SAMM50Q9Y512 469 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 MYH11P35749 1972 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 TTC26A0AVF1 554 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 SPDYE5A6NIY4 337 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 SOWAHDA6NJG2 315 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 SFI1A8K8P3 1242 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 IRF6O14896 467 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 PRPF6O94906 941 aaKnown RBP16.51■□□□□ 0.23
TPM3-205ENST00000328159 GNA14O95837 355 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 QARSP47897 775 aaKnown RBP16.51■□□□□ 0.23
TPM3-205ENST00000328159 JAK3P52333 1124 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 KRT76Q01546 638 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 KNOP1Q1ED39 458 aaKnown RBP16.51■□□□□ 0.23
TPM3-205ENST00000328159 LBX2Q6XYB7 198 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 MYCT1Q8N699 235 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 RETREG2Q8NC44 543 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 PARVGQ9HBI0 331 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 ODF2LQ9ULJ1 636 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 CAPN11Q9UMQ6 739 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 LUC7L2Q9Y383 392 aaKnown RBP16.51■□□□□ 0.23
TPM3-205ENST00000328159 SCN4AP35499 1836 aa16.51■□□□□ 0.23
TPM3-205ENST00000328159 UQCRHLA0A096LP55 91 aa16.5■□□□□ 0.23
TPM3-205ENST00000328159 CXCL11O14625 94 aa16.5■□□□□ 0.23
TPM3-205ENST00000328159 MAFGO15525 162 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms